RNA–Protein interactions for RNA: YER150W

SPI1, Transcript of GPI-anchored cell wall protein involved in weak acid resistance, yeast

Gene SPI1, Length 447 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPI1	YER150W	MSC3	Q05812	728 aa		4.15	□□□□□ -1.75
SPI1	YER150W	SSQ1	Q05931	657 aa	Predicted RBP	4.15	□□□□□ -1.75
SPI1	YER150W	DUS3	Q06053	668 aa	Known RBP	4.15	□□□□□ -1.75
SPI1	YER150W	BOP2	Q06150	570 aa		4.15	□□□□□ -1.75
SPI1	YER150W	ECM7	Q06200	448 aa		4.15	□□□□□ -1.75
SPI1	YER150W	BCP1	Q06338	283 aa		4.15	□□□□□ -1.75
SPI1	YER150W	CIR2	Q08822	631 aa		4.15	□□□□□ -1.75
SPI1	YER150W	YOR389W	Q08912	624 aa		4.15	□□□□□ -1.75
SPI1	YER150W	RCN2	Q12044	265 aa		4.15	□□□□□ -1.75
SPI1	YER150W	NBP2	Q12163	236 aa		4.15	□□□□□ -1.75
SPI1	YER150W	LSP1	Q12230	341 aa	Known RBP	4.15	□□□□□ -1.75
SPI1	YER150W	RPN5	Q12250	445 aa	Known RBP	4.15	□□□□□ -1.75
SPI1	YER150W	YRF1-4	O13559	1382 aa		4.14	□□□□□ -1.75
SPI1	YER150W	DED1	P06634	604 aa	Known RBP	4.14	□□□□□ -1.75
SPI1	YER150W	CDC24	P11433	854 aa	Predicted RBP	4.14	□□□□□ -1.75
SPI1	YER150W	BOS1	P25385	244 aa		4.14	□□□□□ -1.75
SPI1	YER150W	YCR051W	P25631	222 aa		4.14	□□□□□ -1.75
SPI1	YER150W	URA7	P28274	579 aa	Known RBP	4.14	□□□□□ -1.75
SPI1	YER150W	PYC2	P32327	1180 aa	Known RBP	4.14	□□□□□ -1.75
SPI1	YER150W	RPC82	P32349	654 aa		4.14	□□□□□ -1.75
SPI1	YER150W	HIR2	P32480	875 aa		4.14	□□□□□ -1.75
SPI1	YER150W	PTR2	P32901	601 aa		4.14	□□□□□ -1.75
SPI1	YER150W	REC104	P33323	182 aa		4.14	□□□□□ -1.75
SPI1	YER150W	STE13	P33894	931 aa		4.14	□□□□□ -1.75
SPI1	YER150W	CTF13	P35203	478 aa		4.14	□□□□□ -1.75
SPI1	YER150W	FAT1	P38225	669 aa		4.14	□□□□□ -1.75
SPI1	YER150W	GIP1	P38229	639 aa		4.14	□□□□□ -1.75
SPI1	YER150W	GDT1	P38301	280 aa	Predicted RBP	4.14	□□□□□ -1.75
SPI1	YER150W	RGD1	P38339	666 aa		4.14	□□□□□ -1.75
SPI1	YER150W	SIP3	P38717	1229 aa		4.14	□□□□□ -1.75
SPI1	YER150W	SMF1	P38925	575 aa		4.14	□□□□□ -1.75
SPI1	YER150W	FLC2	P39719	783 aa		4.14	□□□□□ -1.75
SPI1	YER150W	MET18	P40469	1032 aa		4.14	□□□□□ -1.75
SPI1	YER150W	YRB2	P40517	327 aa		4.14	□□□□□ -1.75
SPI1	YER150W	ROK1	P45818	564 aa	Predicted RBP	4.14	□□□□□ -1.75
SPI1	YER150W	ARC1	P46672	376 aa	Known RBP	4.14	□□□□□ -1.75
SPI1	YER150W	PTK2	P47116	818 aa	Known RBP	4.14	□□□□□ -1.75
SPI1	YER150W	HNT2	P49775	206 aa		4.14	□□□□□ -1.75
SPI1	YER150W	MCM6	P53091	1017 aa	Known RBP	4.14	□□□□□ -1.75
SPI1	YER150W	YGR035C	P53222	116 aa		4.14	□□□□□ -1.75
SPI1	YER150W	YLR346C	Q06139	101 aa		4.14	□□□□□ -1.75
SPI1	YER150W	EST2	Q06163	884 aa		4.14	□□□□□ -1.75
SPI1	YER150W	YLR413W	Q06689	675 aa		4.14	□□□□□ -1.75
SPI1	YER150W	FMP45	Q07651	309 aa		4.14	□□□□□ -1.75
SPI1	YER150W	BRX1	Q08235	291 aa	Known RBP	4.14	□□□□□ -1.75
SPI1	YER150W	NMD4	Q12129	218 aa		4.14	□□□□□ -1.75
SPI1	YER150W	Q0182	Q9ZZW1	134 aa		4.14	□□□□□ -1.75
SPI1	YER150W	RPS9A	O13516	197 aa	Known RBP	4.13	□□□□□ -1.75
SPI1	YER150W	RPP2B	P02400	110 aa	Known RBP	4.13	□□□□□ -1.75
SPI1	YER150W	RPS9B	P05755	195 aa	Known RBP	4.13	□□□□□ -1.75
SPI1	YER150W	SUI3	P09064	285 aa	Known RBP	4.13	□□□□□ -1.75
SPI1	YER150W	FUS3	P16892	353 aa	Known RBP	4.13	□□□□□ -1.75
SPI1	YER150W	EST1	P17214	699 aa	Predicted RBP	4.13	□□□□□ -1.75
SPI1	YER150W	CDC42	P19073	191 aa		4.13	□□□□□ -1.75
SPI1	YER150W	PMA2	P19657	947 aa		4.13	□□□□□ -1.75
SPI1	YER150W	RPI1	P23250	407 aa	Known RBP	4.13	□□□□□ -1.75
SPI1	YER150W	EMC1	P25574	760 aa		4.13	□□□□□ -1.75
SPI1	YER150W	PER1	P25625	357 aa		4.13	□□□□□ -1.75
SPI1	YER150W	FRD1	P32614	470 aa	Known RBP	4.13	□□□□□ -1.75
SPI1	YER150W	COT1	P32798	439 aa		4.13	□□□□□ -1.75
SPI1	YER150W	RPT5	P33297	434 aa	Known RBP	4.13	□□□□□ -1.75
SPI1	YER150W	SRP68	P38687	599 aa	Known RBP	4.13	□□□□□ -1.75
SPI1	YER150W	MSR1	P38714	643 aa		4.13	□□□□□ -1.75
SPI1	YER150W	LIN1	P38852	340 aa	Predicted RBP	4.13	□□□□□ -1.75
SPI1	YER150W	MNL1	P38888	796 aa		4.13	□□□□□ -1.75
SPI1	YER150W	PSD1	P39006	500 aa		4.13	□□□□□ -1.75
SPI1	YER150W	STT3	P39007	718 aa	Known RBP	4.13	□□□□□ -1.75
SPI1	YER150W	EAF5	P39995	279 aa		4.13	□□□□□ -1.75
SPI1	YER150W	ULP2	P40537	1034 aa	Predicted RBP	4.13	□□□□□ -1.75
SPI1	YER150W	MPH1	P40562	993 aa		4.13	□□□□□ -1.75
SPI1	YER150W	AAD14	P42884	376 aa		4.13	□□□□□ -1.75
SPI1	YER150W	PSP1	P50896	841 aa	Known RBP	4.13	□□□□□ -1.75
SPI1	YER150W	CUE3	P53137	624 aa	Known RBP	4.13	□□□□□ -1.75
SPI1	YER150W	DCP2	P53550	970 aa	Known RBP	4.13	□□□□□ -1.75
SPI1	YER150W	MNT4	P53745	580 aa		4.13	□□□□□ -1.75
SPI1	YER150W	GPD1	Q00055	391 aa	Known RBP	4.13	□□□□□ -1.75
SPI1	YER150W	YSA1	Q01976	231 aa		4.13	□□□□□ -1.75
SPI1	YER150W	MRPS17	Q03246	237 aa	Predicted RBP	4.13	□□□□□ -1.75
SPI1	YER150W	MRPL1	Q04599	285 aa		4.13	□□□□□ -1.75
SPI1	YER150W	NNT1	Q05874	261 aa		4.13	□□□□□ -1.75
SPI1	YER150W	SKG3	Q06315	1026 aa		4.13	□□□□□ -1.75
SPI1	YER150W	IWR1	Q07532	353 aa	Predicted RBP	4.13	□□□□□ -1.75
SPI1	YER150W	TCO89	Q08921	799 aa		4.13	□□□□□ -1.75
SPI1	YER150W	WTM2	Q12206	467 aa		4.13	□□□□□ -1.75
SPI1	YER150W	YOR111W	Q99210	232 aa		4.13	□□□□□ -1.75
SPI1	YER150W	LAM4	P38800	1345 aa		4.13	□□□□□ -1.75
SPI1	YER150W	RPL6B	P05739	176 aa	Known RBP	4.12	□□□□□ -1.75
SPI1	YER150W	UNG1	P12887	359 aa		4.12	□□□□□ -1.75
SPI1	YER150W	STE12	P13574	688 aa		4.12	□□□□□ -1.75
SPI1	YER150W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
SPI1	YER150W	SIR1	P21691	654 aa		4.12	□□□□□ -1.75
SPI1	YER150W	BUD14	P27637	709 aa		4.12	□□□□□ -1.75
SPI1	YER150W	MIA40	P36046	403 aa		4.12	□□□□□ -1.75
SPI1	YER150W	YKR015C	P36111	568 aa		4.12	□□□□□ -1.75
SPI1	YER150W	GLG1	P36143	616 aa		4.12	□□□□□ -1.75
SPI1	YER150W	UGA2	P38067	497 aa		4.12	□□□□□ -1.75
SPI1	YER150W	YBL029W	P38201	376 aa		4.12	□□□□□ -1.75
SPI1	YER150W	TOM71	P38825	639 aa	Known RBP	4.12	□□□□□ -1.75
SPI1	YER150W	WSS1	P38838	269 aa		4.12	□□□□□ -1.75
SPI1	YER150W	REV7	P38927	245 aa		4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms