RNA–Protein interactions for RNA: YDR120C

TRM1, Transcript of tRNA methyltransferase, yeast

Gene TRM1, Length 1,713 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM1	YDR120C	CAP1	P28495	268 aa	Known RBP	4.8	□□□□□ -1.64
TRM1	YDR120C	EXO84	P38261	753 aa		4.8	□□□□□ -1.64
TRM1	YDR120C	VFA1	P40080	203 aa		4.8	□□□□□ -1.64
TRM1	YDR120C	COS12	P53053	380 aa		4.8	□□□□□ -1.64
TRM1	YDR120C	SLI1	P53304	468 aa		4.8	□□□□□ -1.64
TRM1	YDR120C	TRS31	Q03337	283 aa		4.8	□□□□□ -1.64
TRM1	YDR120C	ECM16	Q04217	1267 aa	Known RBP	4.8	□□□□□ -1.64
TRM1	YDR120C	IWR1	Q07532	353 aa	Predicted RBP	4.8	□□□□□ -1.64
TRM1	YDR120C	BMS1	Q08965	1183 aa	Known RBP	4.8	□□□□□ -1.64
TRM1	YDR120C	CTF4	Q01454	927 aa		4.79	□□□□□ -1.64
TRM1	YDR120C	TIM44	Q01852	431 aa		4.79	□□□□□ -1.64
TRM1	YDR120C	HOF1	Q05080	669 aa		4.79	□□□□□ -1.64
TRM1	YDR120C	BLS1	Q06071	122 aa		4.79	□□□□□ -1.64
TRM1	YDR120C	GMH1	P36125	273 aa		4.78	□□□□□ -1.64
TRM1	YDR120C	GLG1	P36143	616 aa		4.78	□□□□□ -1.64
TRM1	YDR120C	PUG1	P40100	303 aa		4.78	□□□□□ -1.64
TRM1	YDR120C	USA1	Q03714	838 aa		4.78	□□□□□ -1.64
TRM1	YDR120C	LAM4	P38800	1345 aa		4.78	□□□□□ -1.64
TRM1	YDR120C	MIS1	P09440	975 aa	Known RBP	4.77	□□□□□ -1.65
TRM1	YDR120C	MOH1	P38191	138 aa		4.77	□□□□□ -1.65
TRM1	YDR120C	BDH2	P39713	417 aa		4.77	□□□□□ -1.65
TRM1	YDR120C	SDS3	P40505	327 aa		4.77	□□□□□ -1.65
TRM1	YDR120C	CCT7	P42943	550 aa	Known RBP	4.77	□□□□□ -1.65
TRM1	YDR120C	DAK1	P54838	584 aa	Known RBP	4.77	□□□□□ -1.65
TRM1	YDR120C	MFM1	Q02783	413 aa		4.77	□□□□□ -1.65
TRM1	YDR120C	NCP1	P16603	691 aa	Known RBP	4.77	□□□□□ -1.65
TRM1	YDR120C	STE4	P18851	423 aa		4.77	□□□□□ -1.65
TRM1	YDR120C	VPS34	P22543	875 aa		4.77	□□□□□ -1.65
TRM1	YDR120C	RIT1	P23796	513 aa		4.77	□□□□□ -1.65
TRM1	YDR120C	SWI4	P25302	1093 aa	Known RBP	4.77	□□□□□ -1.65
TRM1	YDR120C	RPS7A	P26786	190 aa	Known RBP	4.77	□□□□□ -1.65
TRM1	YDR120C	THI6	P41835	540 aa		4.77	□□□□□ -1.65
TRM1	YDR120C	YIP4	P53093	235 aa		4.77	□□□□□ -1.65
TRM1	YDR120C	ARC35	P53731	342 aa	Known RBP	4.77	□□□□□ -1.65
TRM1	YDR120C	RPS15	Q01855	142 aa	Known RBP	4.77	□□□□□ -1.65
TRM1	YDR120C	VPS64	Q03944	604 aa		4.77	□□□□□ -1.65
TRM1	YDR120C	TAF3	Q12297	353 aa		4.77	□□□□□ -1.65
TRM1	YDR120C	IML1	P47170	1584 aa		4.76	□□□□□ -1.65
TRM1	YDR120C	SRB8	P25648	1427 aa		4.76	□□□□□ -1.65
TRM1	YDR120C	ADE3	P07245	946 aa	Known RBP	4.76	□□□□□ -1.65
TRM1	YDR120C	GFA1	P14742	717 aa	Known RBP	4.76	□□□□□ -1.65
TRM1	YDR120C	PRE2	P30656	287 aa	Known RBP	4.76	□□□□□ -1.65
TRM1	YDR120C	SWE1	P32944	819 aa		4.76	□□□□□ -1.65
TRM1	YDR120C	OAR1	P35731	278 aa		4.76	□□□□□ -1.65
TRM1	YDR120C	YBR138C	P38277	524 aa		4.76	□□□□□ -1.65
TRM1	YDR120C	YJL206C	P39529	758 aa		4.76	□□□□□ -1.65
TRM1	YDR120C	BUD17	P53727	317 aa		4.76	□□□□□ -1.65
TRM1	YDR120C	YML131W	Q03102	365 aa		4.76	□□□□□ -1.65
TRM1	YDR120C	TRS130	Q03660	1102 aa		4.76	□□□□□ -1.65
TRM1	YDR120C	AIM6	Q07716	390 aa		4.76	□□□□□ -1.65
TRM1	YDR120C	TY1B-NL2	Q99337	1749 aa	Known RBP	4.76	□□□□□ -1.65
TRM1	YDR120C	CTT1	P06115	562 aa		4.75	□□□□□ -1.65
TRM1	YDR120C	CLB4	P24871	460 aa		4.75	□□□□□ -1.65
TRM1	YDR120C	YCL049C	P25577	312 aa		4.75	□□□□□ -1.65
TRM1	YDR120C	CNE1	P27825	502 aa		4.75	□□□□□ -1.65
TRM1	YDR120C	PMT6	P42934	759 aa		4.75	□□□□□ -1.65
TRM1	YDR120C	IMA1	P53051	589 aa		4.75	□□□□□ -1.65
TRM1	YDR120C	SPC98	P53540	846 aa		4.75	□□□□□ -1.65
TRM1	YDR120C	SUB1	P54000	292 aa	Known RBP	4.75	□□□□□ -1.65
TRM1	YDR120C	GTR1	Q00582	310 aa		4.75	□□□□□ -1.65
TRM1	YDR120C	ARA2	Q04212	335 aa		4.75	□□□□□ -1.65
TRM1	YDR120C	BUD21	Q08492	214 aa	Predicted RBP	4.75	□□□□□ -1.65
TRM1	YDR120C	YPL216W	Q08964	1102 aa		4.75	□□□□□ -1.65
TRM1	YDR120C	ICL2	Q12031	575 aa		4.75	□□□□□ -1.65
TRM1	YDR120C	PNS1	Q12412	539 aa		4.75	□□□□□ -1.65
TRM1	YDR120C	HAP1	P0CE41	1502 aa		4.75	□□□□□ -1.65
TRM1	YDR120C	MTF2	P10849	440 aa		4.75	□□□□□ -1.65
TRM1	YDR120C	BET2	P20133	325 aa		4.75	□□□□□ -1.65
TRM1	YDR120C	BEM3	P32873	1128 aa		4.75	□□□□□ -1.65
TRM1	YDR120C	CAB2	P40506	365 aa		4.75	□□□□□ -1.65
TRM1	YDR120C	IDS2	P46958	469 aa		4.75	□□□□□ -1.65
TRM1	YDR120C	TRS23	Q03784	219 aa		4.75	□□□□□ -1.65
TRM1	YDR120C	YDR179W-A	Q03983	463 aa		4.75	□□□□□ -1.65
TRM1	YDR120C	TMN2	Q04562	672 aa		4.75	□□□□□ -1.65
TRM1	YDR120C	CCL1	P37366	393 aa		4.74	□□□□□ -1.65
TRM1	YDR120C	GND2	P53319	492 aa		4.74	□□□□□ -1.65
TRM1	YDR120C	MRPL13	Q02204	264 aa		4.74	□□□□□ -1.65
TRM1	YDR120C	SVL3	Q03088	825 aa	Known RBP	4.74	□□□□□ -1.65
TRM1	YDR120C	NGL2	Q03264	515 aa	Known RBP	4.74	□□□□□ -1.65
TRM1	YDR120C	NUP188	P52593	1655 aa	Known RBP	4.74	□□□□□ -1.65
TRM1	YDR120C	VMR1	P38735	1592 aa		4.73	□□□□□ -1.65
TRM1	YDR120C	BIK1	P11709	440 aa		4.73	□□□□□ -1.65
TRM1	YDR120C	KIN3	P22209	435 aa		4.73	□□□□□ -1.65
TRM1	YDR120C	XRS2	P33301	854 aa		4.73	□□□□□ -1.65
TRM1	YDR120C	PSY4	P38193	441 aa		4.73	□□□□□ -1.65
TRM1	YDR120C	SDH8	P38345	138 aa		4.73	□□□□□ -1.65
TRM1	YDR120C	MIT1	P40002	666 aa		4.73	□□□□□ -1.65
TRM1	YDR120C	ARB1	P40024	610 aa	Known RBP	4.73	□□□□□ -1.65
TRM1	YDR120C	NUC1	P08466	329 aa		4.72	□□□□□ -1.65
TRM1	YDR120C	YCR061W	P25639	631 aa		4.72	□□□□□ -1.65
TRM1	YDR120C	ARP2	P32381	391 aa	Known RBP	4.72	□□□□□ -1.65
TRM1	YDR120C	LOT5	P34234	306 aa		4.72	□□□□□ -1.65
TRM1	YDR120C	YMC2	P38087	329 aa		4.72	□□□□□ -1.65
TRM1	YDR120C	YPT10	P38146	199 aa		4.72	□□□□□ -1.65
TRM1	YDR120C	FAF1	P40546	346 aa	Predicted RBP	4.72	□□□□□ -1.65
TRM1	YDR120C	SMK1	P41808	388 aa		4.72	□□□□□ -1.65
TRM1	YDR120C	IML2	P47031	731 aa		4.72	□□□□□ -1.65
TRM1	YDR120C	ESF2	P53743	316 aa	Known RBP	4.72	□□□□□ -1.65
TRM1	YDR120C	ATG21	Q02887	496 aa		4.72	□□□□□ -1.65
TRM1	YDR120C	YDL121C	Q07541	149 aa		4.72	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms