RNA–Protein interactions for RNA: YDR042C

YDR042C, Transcript of Putative protein of unknown function, yeast

Gene YDR042C, Length 603 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR042C	YDR042C	YMR124W	P39523	943 aa	Known RBP	4.3	□□□□□ -1.72
YDR042C	YDR042C	VPS8	P39702	1274 aa		4.3	□□□□□ -1.72
YDR042C	YDR042C	SAP1	P39955	897 aa	Known RBP	4.3	□□□□□ -1.72
YDR042C	YDR042C	YJR120W	P47157	116 aa		4.3	□□□□□ -1.72
YDR042C	YDR042C	PLM2	Q04383	521 aa		4.3	□□□□□ -1.72
YDR042C	YDR042C	MRPL1	Q04599	285 aa		4.3	□□□□□ -1.72
YDR042C	YDR042C	LCB4	Q12246	624 aa		4.3	□□□□□ -1.72
YDR042C	YDR042C	RTC1	Q08281	1341 aa		4.29	□□□□□ -1.72
YDR042C	YDR042C	KAR1	P11927	433 aa		4.29	□□□□□ -1.72
YDR042C	YDR042C	PRP45	P28004	379 aa	Predicted RBP	4.29	□□□□□ -1.72
YDR042C	YDR042C	MGM1	P32266	881 aa		4.29	□□□□□ -1.72
YDR042C	YDR042C	PXL1	P36166	706 aa		4.29	□□□□□ -1.72
YDR042C	YDR042C	LNP1	P38878	278 aa		4.29	□□□□□ -1.72
YDR042C	YDR042C	RAD26	P40352	1085 aa		4.29	□□□□□ -1.72
YDR042C	YDR042C	CIN1	P40987	1014 aa		4.29	□□□□□ -1.72
YDR042C	YDR042C	YDL242W	Q07746	117 aa		4.29	□□□□□ -1.72
YDR042C	YDR042C	PSF3	Q12146	194 aa		4.29	□□□□□ -1.72
YDR042C	YDR042C	DBP10	Q12389	995 aa	Known RBP	4.29	□□□□□ -1.72
YDR042C	YDR042C	AIM44	Q99299	758 aa		4.29	□□□□□ -1.72
YDR042C	YDR042C	GRX4	P32642	244 aa		4.28	□□□□□ -1.72
YDR042C	YDR042C	KES1	P35844	434 aa	Known RBP	4.28	□□□□□ -1.72
YDR042C	YDR042C	ARO9	P38840	513 aa	Predicted RBP	4.28	□□□□□ -1.72
YDR042C	YDR042C	FLO5	P38894	1075 aa		4.28	□□□□□ -1.72
YDR042C	YDR042C	COG6	P53959	839 aa		4.28	□□□□□ -1.72
YDR042C	YDR042C	YML053C	Q04978	212 aa		4.28	□□□□□ -1.72
YDR042C	YDR042C	RAD34	Q06665	692 aa		4.28	□□□□□ -1.72
YDR042C	YDR042C	YOR389W	Q08912	624 aa		4.28	□□□□□ -1.72
YDR042C	YDR042C	SLX4	Q12098	748 aa		4.28	□□□□□ -1.72
YDR042C	YDR042C	ILS1	P09436	1072 aa	Known RBP	4.27	□□□□□ -1.73
YDR042C	YDR042C	YCR061W	P25639	631 aa		4.27	□□□□□ -1.73
YDR042C	YDR042C	PRE2	P30656	287 aa	Known RBP	4.27	□□□□□ -1.73
YDR042C	YDR042C	VFA1	P40080	203 aa		4.27	□□□□□ -1.73
YDR042C	YDR042C	AAT1	Q01802	451 aa		4.27	□□□□□ -1.73
YDR042C	YDR042C	YER175W-A	Q8TGU4	54 aa		4.27	□□□□□ -1.73
YDR042C	YDR042C	KGD2	P19262	463 aa	Predicted RBP	4.26	□□□□□ -1.73
YDR042C	YDR042C	ENP1	P38333	483 aa	Known RBP	4.26	□□□□□ -1.73
YDR042C	YDR042C	NOP2	P40991	618 aa	Known RBP	4.26	□□□□□ -1.73
YDR042C	YDR042C	RPL15B	P54780	204 aa	Predicted RBP	4.26	□□□□□ -1.73
YDR042C	YDR042C	TRS31	Q03337	283 aa		4.26	□□□□□ -1.73
YDR042C	YDR042C	TRI1	Q05024	226 aa		4.26	□□□□□ -1.73
YDR042C	YDR042C	PHM6	Q05637	104 aa		4.26	□□□□□ -1.73
YDR042C	YDR042C	LYS21	Q12122	440 aa	Known RBP	4.26	□□□□□ -1.73
YDR042C	YDR042C	YCP4	P25349	247 aa	Known RBP	4.25	□□□□□ -1.73
YDR042C	YDR042C	TFC4	P33339	1025 aa		4.25	□□□□□ -1.73
YDR042C	YDR042C	LSC1	P53598	329 aa	Known RBP	4.25	□□□□□ -1.73
YDR042C	YDR042C	YPT1	P01123	206 aa	Known RBP	4.24	□□□□□ -1.73
YDR042C	YDR042C	PHO3	P24031	467 aa		4.24	□□□□□ -1.73
YDR042C	YDR042C	RPT3	P33298	428 aa	Known RBP	4.24	□□□□□ -1.73
YDR042C	YDR042C	TGL1	P34163	548 aa		4.24	□□□□□ -1.73
YDR042C	YDR042C	SCS2	P40075	244 aa	Known RBP	4.24	□□□□□ -1.73
YDR042C	YDR042C	CRF1	Q04930	467 aa		4.24	□□□□□ -1.73
YDR042C	YDR042C	GET3	Q12154	354 aa	Known RBP	4.24	□□□□□ -1.73
YDR042C	YDR042C	GAL4	P04386	881 aa		4.23	□□□□□ -1.73
YDR042C	YDR042C	CTT1	P06115	562 aa		4.23	□□□□□ -1.73
YDR042C	YDR042C	SES1	P07284	462 aa	Known RBP	4.23	□□□□□ -1.73
YDR042C	YDR042C	VAS1	P07806	1104 aa	Known RBP	4.23	□□□□□ -1.73
YDR042C	YDR042C	AIM17	P23180	465 aa	Known RBP	4.23	□□□□□ -1.73
YDR042C	YDR042C	RPS7A	P26786	190 aa	Known RBP	4.23	□□□□□ -1.73
YDR042C	YDR042C	RGT1	P32862	1170 aa		4.23	□□□□□ -1.73
YDR042C	YDR042C	TAF5	P38129	798 aa		4.23	□□□□□ -1.73
YDR042C	YDR042C	ARB1	P40024	610 aa	Known RBP	4.23	□□□□□ -1.73
YDR042C	YDR042C	POL31	P46957	487 aa		4.23	□□□□□ -1.73
YDR042C	YDR042C	LYS20	P48570	428 aa	Known RBP	4.23	□□□□□ -1.73
YDR042C	YDR042C	PEX14	P53112	341 aa		4.23	□□□□□ -1.73
YDR042C	YDR042C	ACS1	Q01574	713 aa		4.23	□□□□□ -1.73
YDR042C	YDR042C	NUP53	Q03790	475 aa		4.23	□□□□□ -1.73
YDR042C	YDR042C	NUR1	Q12066	484 aa		4.23	□□□□□ -1.73
YDR042C	YDR042C	ERV46	P39727	415 aa		4.22	□□□□□ -1.73
YDR042C	YDR042C	YAT1	P80235	687 aa		4.22	□□□□□ -1.73
YDR042C	YDR042C	ARA2	Q04212	335 aa		4.22	□□□□□ -1.73
YDR042C	YDR042C	PFA4	Q12006	378 aa		4.22	□□□□□ -1.73
YDR042C	YDR042C	ATO2	P32907	282 aa		4.21	□□□□□ -1.74
YDR042C	YDR042C	VBA2	P38358	474 aa	Known RBP	4.21	□□□□□ -1.74
YDR042C	YDR042C	MDV1	P47025	714 aa		4.21	□□□□□ -1.74
YDR042C	YDR042C	PUS4	P48567	403 aa	Known RBP	4.21	□□□□□ -1.74
YDR042C	YDR042C	SNA4	Q07549	140 aa		4.21	□□□□□ -1.74
YDR042C	YDR042C	YPL191C	Q08930	360 aa		4.21	□□□□□ -1.74
YDR042C	YDR042C	ATX2	Q12067	313 aa		4.21	□□□□□ -1.74
YDR042C	YDR042C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
YDR042C	YDR042C	ADH4	P10127	382 aa		4.2	□□□□□ -1.74
YDR042C	YDR042C	SDS22	P36047	338 aa		4.2	□□□□□ -1.74
YDR042C	YDR042C	RPF2	P36160	344 aa	Known RBP	4.2	□□□□□ -1.74
YDR042C	YDR042C	PAF1	P38351	445 aa		4.2	□□□□□ -1.74
YDR042C	YDR042C	SAW1	P39735	261 aa		4.2	□□□□□ -1.74
YDR042C	YDR042C	YIR016W	P40572	265 aa		4.2	□□□□□ -1.74
YDR042C	YDR042C	YNL034W	P53963	612 aa		4.2	□□□□□ -1.74
YDR042C	YDR042C	VTC3	Q02725	835 aa		4.2	□□□□□ -1.74
YDR042C	YDR042C	SRL1	Q08673	210 aa		4.2	□□□□□ -1.74
YDR042C	YDR042C	SEC18	P18759	758 aa	Known RBP	4.19	□□□□□ -1.74
YDR042C	YDR042C	GSH1	P32477	678 aa		4.19	□□□□□ -1.74
YDR042C	YDR042C	SCO2	P38072	301 aa		4.19	□□□□□ -1.74
YDR042C	YDR042C	GND1	P38720	489 aa	Known RBP	4.19	□□□□□ -1.74
YDR042C	YDR042C	YLF2	P38746	405 aa		4.19	□□□□□ -1.74
YDR042C	YDR042C	TOM71	P38825	639 aa	Known RBP	4.19	□□□□□ -1.74
YDR042C	YDR042C	IMA5	P40884	581 aa		4.19	□□□□□ -1.74
YDR042C	YDR042C	VPS64	Q03944	604 aa		4.19	□□□□□ -1.74
YDR042C	YDR042C	CRD1	Q07560	283 aa		4.19	□□□□□ -1.74
YDR042C	YDR042C	BUD7	Q08754	746 aa		4.19	□□□□□ -1.74
YDR042C	YDR042C	ILV2	P07342	687 aa	Known RBP	4.18	□□□□□ -1.74
YDR042C	YDR042C	SIP1	P32578	815 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms