RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 MAPK4P31152 587 aa13.87□□□□□ -0.19
PTP4A1-207ENST00000639568 IRX3P78415 501 aaPredicted RBP13.87□□□□□ -0.19
PTP4A1-207ENST00000639568 SPP2Q13103 211 aa13.87□□□□□ -0.19
PTP4A1-207ENST00000639568 DIXDC1Q155Q3 683 aa13.87□□□□□ -0.19
PTP4A1-207ENST00000639568 CCDC84Q86UT8 332 aaPredicted RBP13.87□□□□□ -0.19
PTP4A1-207ENST00000639568 PUS3Q9BZE2 481 aaKnown RBP13.87□□□□□ -0.19
PTP4A1-207ENST00000639568 ZNF576Q9H609 170 aa13.87□□□□□ -0.19
PTP4A1-207ENST00000639568 CWC22Q9HCG8 908 aaKnown RBP13.87□□□□□ -0.19
PTP4A1-207ENST00000639568 MORF4L1Q9UBU8 362 aa13.87□□□□□ -0.19
PTP4A1-207ENST00000639568 ENTPD3O75355 529 aa13.86□□□□□ -0.19
PTP4A1-207ENST00000639568 DNAJB2P25686 324 aa13.86□□□□□ -0.19
PTP4A1-207ENST00000639568 RGS3P49796 1198 aa13.86□□□□□ -0.19
PTP4A1-207ENST00000639568 HMGCS2P54868 508 aa13.86□□□□□ -0.19
PTP4A1-207ENST00000639568 CCL14Q16627 93 aa13.86□□□□□ -0.19
PTP4A1-207ENST00000639568 METTL24Q5JXM2 366 aa13.86□□□□□ -0.19
PTP4A1-207ENST00000639568 EPHA10Q5JZY3 1008 aa13.86□□□□□ -0.19
PTP4A1-207ENST00000639568 MFSD14CQ5VZR4 134 aa13.86□□□□□ -0.19
PTP4A1-207ENST00000639568 ZNF280CQ8ND82 737 aa13.86□□□□□ -0.19
PTP4A1-207ENST00000639568 LPAR1Q92633 364 aa13.86□□□□□ -0.19
PTP4A1-207ENST00000639568 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.86□□□□□ -0.19
PTP4A1-207ENST00000639568 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.85□□□□□ -0.19
PTP4A1-207ENST00000639568 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.85□□□□□ -0.19
PTP4A1-207ENST00000639568 AKNAD1Q5T1N1 836 aa13.85□□□□□ -0.19
PTP4A1-207ENST00000639568 APBA2Q99767 749 aa13.85□□□□□ -0.19
PTP4A1-207ENST00000639568 TSPYL2Q9H2G4 693 aaPredicted RBP13.85□□□□□ -0.19
PTP4A1-207ENST00000639568 DDX20Q9UHI6 824 aaKnown RBP13.85□□□□□ -0.19
PTP4A1-207ENST00000639568 ADAMTS8Q9UP79 889 aa13.85□□□□□ -0.19
PTP4A1-207ENST00000639568 ATRNL1Q5VV63 1379 aa13.84□□□□□ -0.19
PTP4A1-207ENST00000639568 PIEZO1Q92508 2521 aa13.84□□□□□ -0.19
PTP4A1-207ENST00000639568 IFIT1P09914 478 aaKnown RBP13.84□□□□□ -0.19
PTP4A1-207ENST00000639568 MAP3K10Q02779 954 aa13.84□□□□□ -0.19
PTP4A1-207ENST00000639568 RALBP1Q15311 655 aa13.84□□□□□ -0.19
PTP4A1-207ENST00000639568 CCDC85BQ15834 202 aaPredicted RBP13.84□□□□□ -0.19
PTP4A1-207ENST00000639568 POTEEQ6S8J3 1075 aa13.84□□□□□ -0.19
PTP4A1-207ENST00000639568 SLC39A5Q6ZMH5 540 aa13.84□□□□□ -0.19
PTP4A1-207ENST00000639568 ARRDC4Q8NCT1 418 aa13.84□□□□□ -0.19
PTP4A1-207ENST00000639568 TIFAQ96CG3 184 aa13.84□□□□□ -0.19
PTP4A1-207ENST00000639568 SNX27Q96L92 541 aa13.84□□□□□ -0.19
PTP4A1-207ENST00000639568 TBC1D2Q9BYX2 928 aa13.84□□□□□ -0.19
PTP4A1-207ENST00000639568 FOXD4L1Q9NU39 408 aa13.84□□□□□ -0.19
PTP4A1-207ENST00000639568 C9orf78Q9NZ63 289 aaPredicted RBP13.84□□□□□ -0.19
PTP4A1-207ENST00000639568 KBTBD13C9JR72 458 aa13.83□□□□□ -0.2
PTP4A1-207ENST00000639568 GRM8O00222 908 aa13.83□□□□□ -0.2
PTP4A1-207ENST00000639568 PDE8BO95263 885 aa13.83□□□□□ -0.2
PTP4A1-207ENST00000639568 MYCNP04198 464 aaPredicted RBP13.83□□□□□ -0.2
PTP4A1-207ENST00000639568 LDHBP07195 334 aaKnown RBP13.83□□□□□ -0.2
PTP4A1-207ENST00000639568 TWISTNBQ3B726 338 aaPredicted RBP13.83□□□□□ -0.2
PTP4A1-207ENST00000639568 GPR142Q7Z601 462 aa13.83□□□□□ -0.2
PTP4A1-207ENST00000639568 PLEKHH3Q7Z736 793 aa13.83□□□□□ -0.2
PTP4A1-207ENST00000639568 ALYREFQ86V81 257 aaKnown RBP13.83□□□□□ -0.2
PTP4A1-207ENST00000639568 USP6NLQ92738 828 aa13.83□□□□□ -0.2
PTP4A1-207ENST00000639568 LRFN3Q9BTN0 628 aa13.83□□□□□ -0.2
PTP4A1-207ENST00000639568 IDI2Q9BXS1 227 aa13.83□□□□□ -0.2
PTP4A1-207ENST00000639568 GLRX3O76003 335 aaKnown RBP13.82□□□□□ -0.2
PTP4A1-207ENST00000639568 TRIM60Q495X7 471 aa13.82□□□□□ -0.2
PTP4A1-207ENST00000639568 MORN1Q5T089 497 aa13.82□□□□□ -0.2
PTP4A1-207ENST00000639568 GJC2Q5T442 439 aaPredicted RBP13.82□□□□□ -0.2
PTP4A1-207ENST00000639568 SH3BP5LQ7L8J4 393 aa13.82□□□□□ -0.2
PTP4A1-207ENST00000639568 EDC3Q96F86 508 aaKnown RBP13.82□□□□□ -0.2
PTP4A1-207ENST00000639568 P2RX7Q99572 595 aaKnown RBP13.82□□□□□ -0.2
PTP4A1-207ENST00000639568 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.82□□□□□ -0.2
PTP4A1-207ENST00000639568 PDLIM7Q9NR12 457 aa13.82□□□□□ -0.2
PTP4A1-207ENST00000639568 TMOD4Q9NZQ9 345 aa13.82□□□□□ -0.2
PTP4A1-207ENST00000639568 TRIM43BA6NCK2 446 aa13.81□□□□□ -0.2
PTP4A1-207ENST00000639568 DDTLA6NHG4 134 aaPredicted RBP13.81□□□□□ -0.2
PTP4A1-207ENST00000639568 APAF1O14727 1248 aa13.81□□□□□ -0.2
PTP4A1-207ENST00000639568 SLURP2P0DP57 97 aa13.81□□□□□ -0.2
PTP4A1-207ENST00000639568 IGFBP4P22692 258 aa13.81□□□□□ -0.2
PTP4A1-207ENST00000639568 PRDX5P30044 214 aa13.81□□□□□ -0.2
PTP4A1-207ENST00000639568 HERVK_113P62684 666 aa13.81□□□□□ -0.2
PTP4A1-207ENST00000639568 ATP2B2Q01814 1243 aa13.81□□□□□ -0.2
PTP4A1-207ENST00000639568 PICALMQ13492 652 aa13.81□□□□□ -0.2
PTP4A1-207ENST00000639568 TMEM31Q5JXX7 168 aa13.81□□□□□ -0.2
PTP4A1-207ENST00000639568 BEND3Q5T5X7 828 aa13.81□□□□□ -0.2
PTP4A1-207ENST00000639568 SH3RF1Q7Z6J0 888 aa13.81□□□□□ -0.2
PTP4A1-207ENST00000639568 TSR2Q969E8 191 aaKnown RBP13.81□□□□□ -0.2
PTP4A1-207ENST00000639568 TRIM43Q96BQ3 446 aaPredicted RBP13.81□□□□□ -0.2
PTP4A1-207ENST00000639568 NECAB3Q96P71 396 aaPredicted RBP13.81□□□□□ -0.2
PTP4A1-207ENST00000639568 OSBPL5Q9H0X9 879 aaPredicted RBP13.81□□□□□ -0.2
PTP4A1-207ENST00000639568 PRDM12Q9H4Q4 367 aa13.81□□□□□ -0.2
PTP4A1-207ENST00000639568 AS3MTQ9HBK9 375 aa13.81□□□□□ -0.2
PTP4A1-207ENST00000639568 TXNRD2Q9NNW7 524 aa13.81□□□□□ -0.2
PTP4A1-207ENST00000639568 TACC3Q9Y6A5 838 aa13.81□□□□□ -0.2
PTP4A1-207ENST00000639568 DOCK3Q8IZD9 2030 aa13.8□□□□□ -0.2
PTP4A1-207ENST00000639568 USP17L5A8MUK1 530 aa13.8□□□□□ -0.2
PTP4A1-207ENST00000639568 PEX10O60683 326 aa13.8□□□□□ -0.2
PTP4A1-207ENST00000639568 MAP2K5Q13163 448 aa13.8□□□□□ -0.2
PTP4A1-207ENST00000639568 PUM3Q15397 648 aaKnown RBP13.8□□□□□ -0.2
PTP4A1-207ENST00000639568 AAK1Q2M2I8 961 aa13.8□□□□□ -0.2
PTP4A1-207ENST00000639568 SH3D19Q5HYK7 790 aa13.8□□□□□ -0.2
PTP4A1-207ENST00000639568 PAGR1Q9BTK6 254 aa13.8□□□□□ -0.2
PTP4A1-207ENST00000639568 UTYO14607 1347 aa13.8□□□□□ -0.2
PTP4A1-207ENST00000639568 KIF16BQ96L93 1317 aa13.8□□□□□ -0.2
PTP4A1-207ENST00000639568 MYBBP1AQ9BQG0 1328 aaKnown RBP13.8□□□□□ -0.2
PTP4A1-207ENST00000639568 A0A1B0GUL6 1792 aa13.8□□□□□ -0.2
PTP4A1-207ENST00000639568 NCOR1O75376 2440 aa13.8□□□□□ -0.2
PTP4A1-207ENST00000639568 TBC1D12O60347 775 aa13.79□□□□□ -0.2
PTP4A1-207ENST00000639568 RAG1P15918 1043 aa13.79□□□□□ -0.2
PTP4A1-207ENST00000639568 ERVK-9P63128 1117 aa13.79□□□□□ -0.2
PTP4A1-207ENST00000639568 ERVK-24P63145 666 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms