RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 SENP7Q9BQF6 1050 aa7.84□□□□□ -1.15
RTTN-215ENST00000639487 KCNG1Q9UIX4 513 aa7.84□□□□□ -1.15
RTTN-215ENST00000639487 MX1P20591 662 aa7.84□□□□□ -1.15
RTTN-215ENST00000639487 EPHX2P34913 555 aa7.84□□□□□ -1.15
RTTN-215ENST00000639487 EXOSC10Q01780 885 aaKnown RBP7.84□□□□□ -1.15
RTTN-215ENST00000639487 KRT32Q14532 448 aa7.84□□□□□ -1.15
RTTN-215ENST00000639487 NECTIN1Q15223 517 aa7.84□□□□□ -1.15
RTTN-215ENST00000639487 C9orf131Q5VYM1 1079 aa7.84□□□□□ -1.15
RTTN-215ENST00000639487 DPY19L2Q6NUT2 758 aa7.84□□□□□ -1.15
RTTN-215ENST00000639487 NEDD1Q8NHV4 660 aa7.84□□□□□ -1.15
RTTN-215ENST00000639487 MS4A4AQ96JQ5 239 aa7.84□□□□□ -1.15
RTTN-215ENST00000639487 ZBTB3Q9H5J0 574 aa7.84□□□□□ -1.15
RTTN-215ENST00000639487 FLT1P17948 1338 aa7.84□□□□□ -1.15
RTTN-215ENST00000639487 SYNGAP1Q96PV0 1343 aa7.84□□□□□ -1.15
RTTN-215ENST00000639487 PSMD14O00487 310 aa7.83□□□□□ -1.16
RTTN-215ENST00000639487 SGSM2O43147 1006 aa7.83□□□□□ -1.16
RTTN-215ENST00000639487 CRKP46108 304 aa7.83□□□□□ -1.16
RTTN-215ENST00000639487 USP14P54578 494 aa7.83□□□□□ -1.16
RTTN-215ENST00000639487 MAP3K21Q5TCX8 1036 aa7.83□□□□□ -1.16
RTTN-215ENST00000639487 FTSJ3Q8IY81 847 aaKnown RBP7.83□□□□□ -1.16
RTTN-215ENST00000639487 RRP7AQ9Y3A4 280 aaKnown RBP7.83□□□□□ -1.16
RTTN-215ENST00000639487 GBF1Q92538 1859 aa7.83□□□□□ -1.16
RTTN-215ENST00000639487 HSPA6P17066 643 aa7.83□□□□□ -1.16
RTTN-215ENST00000639487 EDNRBP24530 442 aa7.83□□□□□ -1.16
RTTN-215ENST00000639487 HNRNPUQ00839 825 aaKnown RBP eCLIP7.83□□□□□ -1.16
RTTN-215ENST00000639487 G3BP1Q13283 466 aaKnown RBP eCLIP7.83□□□□□ -1.16
RTTN-215ENST00000639487 CLASRPQ8N2M8 674 aaKnown RBP7.83□□□□□ -1.16
RTTN-215ENST00000639487 SH2D4AQ9H788 454 aa7.83□□□□□ -1.16
RTTN-215ENST00000639487 TCERG1O14776 1098 aaKnown RBP7.83□□□□□ -1.16
RTTN-215ENST00000639487 BAG3O95817 575 aa7.83□□□□□ -1.16
RTTN-215ENST00000639487 GCLCP48506 637 aaPredicted RBP7.83□□□□□ -1.16
RTTN-215ENST00000639487 SEC23AQ15436 765 aa7.83□□□□□ -1.16
RTTN-215ENST00000639487 ECM1Q16610 540 aa7.83□□□□□ -1.16
RTTN-215ENST00000639487 SCYL3Q8IZE3 742 aa7.83□□□□□ -1.16
RTTN-215ENST00000639487 PDGFDQ9GZP0 370 aaPredicted RBP7.83□□□□□ -1.16
RTTN-215ENST00000639487 LSG1Q9H089 658 aaKnown RBP7.83□□□□□ -1.16
RTTN-215ENST00000639487 PAG1Q9NWQ8 432 aa7.83□□□□□ -1.16
RTTN-215ENST00000639487 EP400Q96L91 3159 aa7.82□□□□□ -1.16
RTTN-215ENST00000639487 DNAJC25-GNG10A0A024R161 153 aa7.82□□□□□ -1.16
RTTN-215ENST00000639487 BCRP11274 1271 aa7.82□□□□□ -1.16
RTTN-215ENST00000639487 ECE1P42892 770 aa7.82□□□□□ -1.16
RTTN-215ENST00000639487 SREBF2Q12772 1141 aa7.82□□□□□ -1.16
RTTN-215ENST00000639487 GPAT2Q6NUI2 795 aa7.82□□□□□ -1.16
RTTN-215ENST00000639487 TMTC2Q8N394 836 aa7.82□□□□□ -1.16
RTTN-215ENST00000639487 TMEM87BQ96K49 555 aa7.82□□□□□ -1.16
RTTN-215ENST00000639487 LLPHQ9BRT6 129 aaKnown RBP7.82□□□□□ -1.16
RTTN-215ENST00000639487 SPZ1Q9BXG8 430 aa7.82□□□□□ -1.16
RTTN-215ENST00000639487 CRISPLD2Q9H0B8 497 aa7.82□□□□□ -1.16
RTTN-215ENST00000639487 RANBP17Q9H2T7 1088 aaKnown RBP7.82□□□□□ -1.16
RTTN-215ENST00000639487 STK24Q9Y6E0 443 aa7.82□□□□□ -1.16
RTTN-215ENST00000639487 TNKSO95271 1327 aa7.82□□□□□ -1.16
RTTN-215ENST00000639487 CARNS1A5YM72 827 aa7.82□□□□□ -1.16
RTTN-215ENST00000639487 PDE4AP27815 886 aa7.82□□□□□ -1.16
RTTN-215ENST00000639487 HSPA4P34932 840 aa7.82□□□□□ -1.16
RTTN-215ENST00000639487 HIRAP54198 1017 aaPredicted RBP7.82□□□□□ -1.16
RTTN-215ENST00000639487 TFCP2Q12800 502 aa7.82□□□□□ -1.16
RTTN-215ENST00000639487 KIF4BQ2VIQ3 1234 aa7.82□□□□□ -1.16
RTTN-215ENST00000639487 LDHAL6AQ6ZMR3 332 aa7.82□□□□□ -1.16
RTTN-215ENST00000639487 TMX4Q9H1E5 349 aaPredicted RBP7.82□□□□□ -1.16
RTTN-215ENST00000639487 RNF216Q9NWF9 866 aaPredicted RBP7.82□□□□□ -1.16
RTTN-215ENST00000639487 MIS18AQ9NYP9 233 aa7.82□□□□□ -1.16
RTTN-215ENST00000639487 CTNNA3Q9UI47 895 aa7.82□□□□□ -1.16
RTTN-215ENST00000639487 MICAL3Q7RTP6 2002 aa7.82□□□□□ -1.16
RTTN-215ENST00000639487 DCAF8L1A6NGE4 600 aa7.81□□□□□ -1.16
RTTN-215ENST00000639487 C21orf2O43822 256 aa7.81□□□□□ -1.16
RTTN-215ENST00000639487 FAM160B2Q86V87 743 aa7.81□□□□□ -1.16
RTTN-215ENST00000639487 RHOBTB2Q9BYZ6 727 aa7.81□□□□□ -1.16
RTTN-215ENST00000639487 CHD5Q8TDI0 1954 aa7.81□□□□□ -1.16
RTTN-215ENST00000639487 UFL1O94874 794 aa7.81□□□□□ -1.16
RTTN-215ENST00000639487 CALM1P0DP23 149 aa7.81□□□□□ -1.16
RTTN-215ENST00000639487 CALM2P0DP24 149 aa7.81□□□□□ -1.16
RTTN-215ENST00000639487 CALM3P0DP25 149 aa7.81□□□□□ -1.16
RTTN-215ENST00000639487 MYL6BP14649 208 aa7.81□□□□□ -1.16
RTTN-215ENST00000639487 LRRC24Q50LG9 513 aa7.81□□□□□ -1.16
RTTN-215ENST00000639487 TMEM179Q6ZVK1 233 aa7.81□□□□□ -1.16
RTTN-215ENST00000639487 CNTROBQ8N137 903 aa7.81□□□□□ -1.16
RTTN-215ENST00000639487 SLC43A3Q8NBI5 491 aa7.81□□□□□ -1.16
RTTN-215ENST00000639487 MPHOSPH8Q99549 860 aa7.81□□□□□ -1.16
RTTN-215ENST00000639487 AS3MTQ9HBK9 375 aa7.81□□□□□ -1.16
RTTN-215ENST00000639487 SEC31BQ9NQW1 1179 aa7.81□□□□□ -1.16
RTTN-215ENST00000639487 PI4KBQ9UBF8 816 aa7.81□□□□□ -1.16
RTTN-215ENST00000639487 M0R2N6 131 aa7.81□□□□□ -1.16
RTTN-215ENST00000639487 WNT10BO00744 389 aa7.81□□□□□ -1.16
RTTN-215ENST00000639487 WDR46O15213 610 aaKnown RBP7.81□□□□□ -1.16
RTTN-215ENST00000639487 SRGAP3O43295 1099 aa7.81□□□□□ -1.16
RTTN-215ENST00000639487 USP2O75604 605 aaPredicted RBP7.81□□□□□ -1.16
RTTN-215ENST00000639487 ICAM3P32942 547 aa7.81□□□□□ -1.16
RTTN-215ENST00000639487 GUCY1A2P33402 732 aa7.81□□□□□ -1.16
RTTN-215ENST00000639487 DDIT3P35638 169 aa7.81□□□□□ -1.16
RTTN-215ENST00000639487 MAP3K12Q12852 859 aa7.81□□□□□ -1.16
RTTN-215ENST00000639487 RUFY2Q8WXA3 655 aa7.81□□□□□ -1.16
RTTN-215ENST00000639487 SNCAIPQ9Y6H5 919 aa7.81□□□□□ -1.16
RTTN-215ENST00000639487 INPPL1O15357 1258 aa7.8□□□□□ -1.16
RTTN-215ENST00000639487 CYP3A4P08684 503 aa7.8□□□□□ -1.16
RTTN-215ENST00000639487 MCM2P49736 904 aa7.8□□□□□ -1.16
RTTN-215ENST00000639487 GTF2A2P52657 109 aa7.8□□□□□ -1.16
RTTN-215ENST00000639487 MORN1Q5T089 497 aa7.8□□□□□ -1.16
RTTN-215ENST00000639487 CDC42EP5Q6NZY7 148 aa7.8□□□□□ -1.16
RTTN-215ENST00000639487 USP17L2Q6R6M4 530 aa7.8□□□□□ -1.16
RTTN-215ENST00000639487 TSPAN18Q96SJ8 248 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms