RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 FERMT3Q86UX7 667 aa25.41■■□□□ 1.66
SCARB2-212ENST00000638663 CCDC144CPQ8IYA2 1237 aa25.41■■□□□ 1.66
SCARB2-212ENST00000638663 RTKN2Q8IZC4 609 aa25.41■■□□□ 1.66
SCARB2-212ENST00000638663 KIF3AQ9Y496 699 aa25.41■■□□□ 1.66
SCARB2-212ENST00000638663 ATP6V1DQ9Y5K8 247 aa25.41■■□□□ 1.66
SCARB2-212ENST00000638663 SCN9AQ15858 1988 aa25.4■■□□□ 1.66
SCARB2-212ENST00000638663 CDK5RAP2Q96SN8 1893 aa25.4■■□□□ 1.66
SCARB2-212ENST00000638663 POLR3DP05423 398 aaPredicted RBP25.4■■□□□ 1.66
SCARB2-212ENST00000638663 ADD1P35611 737 aaKnown RBP25.4■■□□□ 1.66
SCARB2-212ENST00000638663 FOSBP53539 338 aa25.4■■□□□ 1.66
SCARB2-212ENST00000638663 GRIPAP1Q4V328 841 aa25.4■■□□□ 1.66
SCARB2-212ENST00000638663 DACT2Q5SW24 774 aa25.4■■□□□ 1.66
SCARB2-212ENST00000638663 SYNE3Q6ZMZ3 975 aa25.4■■□□□ 1.66
SCARB2-212ENST00000638663 DYNLL2Q96FJ2 89 aa25.4■■□□□ 1.66
SCARB2-212ENST00000638663 ZSCAN10Q96SZ4 725 aaPredicted RBP25.4■■□□□ 1.66
SCARB2-212ENST00000638663 FLT1P17948 1338 aa25.4■■□□□ 1.66
SCARB2-212ENST00000638663 GOLGA8AA7E2F4 631 aa25.39■■□□□ 1.66
SCARB2-212ENST00000638663 H3BQV1 296 aa25.39■■□□□ 1.66
SCARB2-212ENST00000638663 FDPSP14324 419 aaKnown RBP25.39■■□□□ 1.66
SCARB2-212ENST00000638663 SEC23AQ15436 765 aa25.39■■□□□ 1.66
SCARB2-212ENST00000638663 SKOR2Q2VWA4 1001 aaPredicted RBP25.39■■□□□ 1.66
SCARB2-212ENST00000638663 IFFO2Q5TF58 517 aa25.39■■□□□ 1.66
SCARB2-212ENST00000638663 TMTC2Q8N394 836 aa25.39■■□□□ 1.66
SCARB2-212ENST00000638663 USP17L3A6NCW0 530 aa25.39■■□□□ 1.65
SCARB2-212ENST00000638663 USP17L4A6NCW7 530 aa25.39■■□□□ 1.65
SCARB2-212ENST00000638663 CDC27P30260 824 aa25.39■■□□□ 1.65
SCARB2-212ENST00000638663 TGFB2P61812 414 aa25.39■■□□□ 1.65
SCARB2-212ENST00000638663 USP17L1Q7RTZ2 530 aa25.39■■□□□ 1.65
SCARB2-212ENST00000638663 IQCA1Q86XH1 822 aa25.39■■□□□ 1.65
SCARB2-212ENST00000638663 UPF1Q92900 1129 aaKnown RBP eCLIP25.39■■□□□ 1.65
SCARB2-212ENST00000638663 PLCD1P51178 756 aa25.38■■□□□ 1.65
SCARB2-212ENST00000638663 FAM47AQ5JRC9 791 aa25.38■■□□□ 1.65
SCARB2-212ENST00000638663 KIAA0825Q8IV33 1275 aa25.38■■□□□ 1.65
SCARB2-212ENST00000638663 ENAHQ8N8S7 591 aaPredicted RBP25.38■■□□□ 1.65
SCARB2-212ENST00000638663 TEKT1Q969V4 418 aa25.38■■□□□ 1.65
SCARB2-212ENST00000638663 FKBP1AP62942 108 aaKnown RBP25.37■■□□□ 1.65
SCARB2-212ENST00000638663 HHIPL2Q6UWX4 724 aa25.37■■□□□ 1.65
SCARB2-212ENST00000638663 GDPD2Q9HCC8 539 aa25.37■■□□□ 1.65
SCARB2-212ENST00000638663 PIM2Q9P1W9 311 aa25.37■■□□□ 1.65
SCARB2-212ENST00000638663 ROBO3Q96MS0 1386 aa25.37■■□□□ 1.65
SCARB2-212ENST00000638663 PSMD1Q99460 953 aa25.37■■□□□ 1.65
SCARB2-212ENST00000638663 ORC3Q9UBD5 711 aaPredicted RBP25.37■■□□□ 1.65
SCARB2-212ENST00000638663 PPP1R1BQ9UD71 204 aaPredicted RBP25.37■■□□□ 1.65
SCARB2-212ENST00000638663 CNPY2Q9Y2B0 182 aa25.37■■□□□ 1.65
SCARB2-212ENST00000638663 GZF1Q9H116 711 aaPredicted RBP25.36■■□□□ 1.65
SCARB2-212ENST00000638663 FAM217BQ9NTX9 383 aaPredicted RBP25.36■■□□□ 1.65
SCARB2-212ENST00000638663 DDX49Q9Y6V7 483 aaKnown RBP25.36■■□□□ 1.65
SCARB2-212ENST00000638663 ADAMTSL1Q8N6G6 1762 aa25.36■■□□□ 1.65
SCARB2-212ENST00000638663 YDJCA8MPS7 323 aa25.35■■□□□ 1.65
SCARB2-212ENST00000638663 CRKP46108 304 aa25.35■■□□□ 1.65
SCARB2-212ENST00000638663 ZNF654Q8IZM8 581 aa25.35■■□□□ 1.65
SCARB2-212ENST00000638663 ZNF277Q9NRM2 450 aaPredicted RBP25.35■■□□□ 1.65
SCARB2-212ENST00000638663 USP40Q9NVE5 1235 aa25.35■■□□□ 1.65
SCARB2-212ENST00000638663 TSPY2A6NKD2 308 aa25.35■■□□□ 1.65
SCARB2-212ENST00000638663 NCLP19338 710 aaKnown RBP25.35■■□□□ 1.65
SCARB2-212ENST00000638663 DNM1Q05193 864 aaKnown RBP25.35■■□□□ 1.65
SCARB2-212ENST00000638663 PICALMQ13492 652 aa25.35■■□□□ 1.65
SCARB2-212ENST00000638663 IFIT1BQ5T764 474 aaKnown RBP25.35■■□□□ 1.65
SCARB2-212ENST00000638663 CPLX2Q6PUV4 134 aaKnown RBP25.35■■□□□ 1.65
SCARB2-212ENST00000638663 MKNK2Q9HBH9 465 aa25.35■■□□□ 1.65
SCARB2-212ENST00000638663 PSDA5PKW4 1024 aaPredicted RBP25.34■■□□□ 1.65
SCARB2-212ENST00000638663 NMT2O60551 498 aa25.34■■□□□ 1.65
SCARB2-212ENST00000638663 CDKL5O76039 1030 aa25.34■■□□□ 1.65
SCARB2-212ENST00000638663 GSE1Q14687 1217 aa25.34■■□□□ 1.65
SCARB2-212ENST00000638663 APOBEC3HQ6NTF7 200 aaKnown RBP25.34■■□□□ 1.65
SCARB2-212ENST00000638663 SLC44A5Q8NCS7 719 aa25.34■■□□□ 1.65
SCARB2-212ENST00000638663 NUP133Q8WUM0 1156 aa25.34■■□□□ 1.65
SCARB2-212ENST00000638663 DDX60LQ5H9U9 1706 aaKnown RBP25.34■■□□□ 1.65
SCARB2-212ENST00000638663 ZNF646O15015 1829 aaPredicted RBP25.33■■□□□ 1.65
SCARB2-212ENST00000638663 TCHHQ07283 1943 aa25.33■■□□□ 1.65
SCARB2-212ENST00000638663 CDC42EP5Q6NZY7 148 aa25.33■■□□□ 1.65
SCARB2-212ENST00000638663 KLHL34Q8N239 644 aa25.33■■□□□ 1.65
SCARB2-212ENST00000638663 NID2Q14112 1375 aa25.33■■□□□ 1.65
SCARB2-212ENST00000638663 WDHD1O75717 1129 aaPredicted RBP25.33■■□□□ 1.65
SCARB2-212ENST00000638663 GUCY1B3Q02153 619 aa25.33■■□□□ 1.65
SCARB2-212ENST00000638663 NTRK3Q16288 839 aa25.33■■□□□ 1.65
SCARB2-212ENST00000638663 RTN1Q16799 776 aa25.33■■□□□ 1.65
SCARB2-212ENST00000638663 FAM173BQ6P4H8 233 aa25.33■■□□□ 1.65
SCARB2-212ENST00000638663 USP48Q86UV5 1035 aa25.33■■□□□ 1.65
SCARB2-212ENST00000638663 LARGE2Q8N3Y3 721 aa25.33■■□□□ 1.65
SCARB2-212ENST00000638663 PHKBQ93100 1093 aa25.33■■□□□ 1.65
SCARB2-212ENST00000638663 GOLGB1Q14789 3259 aaKnown RBP25.33■■□□□ 1.64
SCARB2-212ENST00000638663 TFAP4Q01664 338 aa25.32■■□□□ 1.64
SCARB2-212ENST00000638663 SOGA3Q5TF21 947 aa25.32■■□□□ 1.64
SCARB2-212ENST00000638663 DDX4Q9NQI0 724 aaKnown RBP25.32■■□□□ 1.64
SCARB2-212ENST00000638663 FOCADQ5VW36 1801 aa25.32■■□□□ 1.64
SCARB2-212ENST00000638663 RBM5P52756 815 aaKnown RBP eCLIP25.31■■□□□ 1.64
SCARB2-212ENST00000638663 RESTQ13127 1097 aa25.31■■□□□ 1.64
SCARB2-212ENST00000638663 KLHL40Q2TBA0 621 aa25.31■■□□□ 1.64
SCARB2-212ENST00000638663 DALRD3Q5D0E6 543 aaKnown RBP25.31■■□□□ 1.64
SCARB2-212ENST00000638663 ZDHHC15Q96MV8 337 aa25.31■■□□□ 1.64
SCARB2-212ENST00000638663 PCDHAC2Q9Y5I4 1007 aa25.31■■□□□ 1.64
SCARB2-212ENST00000638663 MYH1P12882 1939 aa25.31■■□□□ 1.64
SCARB2-212ENST00000638663 RCAN1P53805 252 aa25.31■■□□□ 1.64
SCARB2-212ENST00000638663 FANCBQ8NB91 859 aa25.31■■□□□ 1.64
SCARB2-212ENST00000638663 SGIP1Q9BQI5 828 aa25.31■■□□□ 1.64
SCARB2-212ENST00000638663 MRIQ9BWK5 157 aa25.31■■□□□ 1.64
SCARB2-212ENST00000638663 FIBPO43427 364 aa25.3■■□□□ 1.64
SCARB2-212ENST00000638663 IARSP41252 1262 aaKnown RBP25.3■■□□□ 1.64
SCARB2-212ENST00000638663 C16orf86Q6ZW13 317 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 172.7 ms