RNA–Protein interactions for RNA: ENST00000635227.1

LINC01108-202, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 3 BASIC

Gene LINC01108, Length 776 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-202ENST00000635227 ABCA10Q8WWZ4 1543 aa10.66□□□□□ -0.7
LINC01108-202ENST00000635227 PBRM1Q86U86 1689 aa10.66□□□□□ -0.7
LINC01108-202ENST00000635227 SHROOM2Q13796 1616 aa10.66□□□□□ -0.7
LINC01108-202ENST00000635227 MINDY4BA8MYZ0 360 aa10.65□□□□□ -0.7
LINC01108-202ENST00000635227 DYRK3O43781 588 aa10.65□□□□□ -0.7
LINC01108-202ENST00000635227 ZNF76P36508 570 aa10.65□□□□□ -0.7
LINC01108-202ENST00000635227 ASPAP45381 313 aa10.65□□□□□ -0.7
LINC01108-202ENST00000635227 HS2ST1Q7LGA3 356 aa10.65□□□□□ -0.7
LINC01108-202ENST00000635227 RHOVQ96L33 236 aa10.65□□□□□ -0.7
LINC01108-202ENST00000635227 RAXQ9Y2V3 346 aa10.65□□□□□ -0.7
LINC01108-202ENST00000635227 CSADQ9Y600 493 aa10.65□□□□□ -0.7
LINC01108-202ENST00000635227 CLIP1P30622 1438 aa10.65□□□□□ -0.7
LINC01108-202ENST00000635227 ABCA5Q8WWZ7 1642 aa10.65□□□□□ -0.7
LINC01108-202ENST00000635227 MED1Q15648 1581 aaPredicted RBP10.65□□□□□ -0.71
LINC01108-202ENST00000635227 CUL7Q14999 1698 aa10.64□□□□□ -0.71
LINC01108-202ENST00000635227 PRXQ9BXM0 1461 aa10.64□□□□□ -0.71
LINC01108-202ENST00000635227 DCDC2CA8MYV0 355 aa10.64□□□□□ -0.71
LINC01108-202ENST00000635227 PF4P02776 101 aa10.64□□□□□ -0.71
LINC01108-202ENST00000635227 MAP4P27816 1152 aaKnown RBP10.64□□□□□ -0.71
LINC01108-202ENST00000635227 CDK8P49336 464 aa10.64□□□□□ -0.71
LINC01108-202ENST00000635227 CAMK2GQ13555 558 aaPredicted RBP10.64□□□□□ -0.71
LINC01108-202ENST00000635227 INPP5AQ14642 412 aa10.64□□□□□ -0.71
LINC01108-202ENST00000635227 BEND4Q6ZU67 534 aa10.64□□□□□ -0.71
LINC01108-202ENST00000635227 TRIM42Q8IWZ5 723 aa10.64□□□□□ -0.71
LINC01108-202ENST00000635227 MIR1-1HGQ9H1L0 117 aa10.64□□□□□ -0.71
LINC01108-202ENST00000635227 GRIN2BQ13224 1484 aa10.63□□□□□ -0.71
LINC01108-202ENST00000635227 RAPGEF2Q9Y4G8 1499 aa10.63□□□□□ -0.71
LINC01108-202ENST00000635227 HMX2A2RU54 273 aa10.63□□□□□ -0.71
LINC01108-202ENST00000635227 RAB6AP20340 208 aa10.63□□□□□ -0.71
LINC01108-202ENST00000635227 RXRBP28702 533 aa10.63□□□□□ -0.71
LINC01108-202ENST00000635227 ZEB1P37275 1124 aaPredicted RBP10.63□□□□□ -0.71
LINC01108-202ENST00000635227 C12orf40Q86WS4 652 aa10.63□□□□□ -0.71
LINC01108-202ENST00000635227 STOML1Q9UBI4 398 aa10.63□□□□□ -0.71
LINC01108-202ENST00000635227 SCAMP3O14828 347 aaKnown RBP10.62□□□□□ -0.71
LINC01108-202ENST00000635227 HSPA2P54652 639 aa10.62□□□□□ -0.71
LINC01108-202ENST00000635227 ERVK-24P63145 666 aa10.62□□□□□ -0.71
LINC01108-202ENST00000635227 FAM160A1Q05DH4 1040 aa10.62□□□□□ -0.71
LINC01108-202ENST00000635227 PWP1Q13610 501 aa10.62□□□□□ -0.71
LINC01108-202ENST00000635227 TTLL4Q14679 1199 aa10.62□□□□□ -0.71
LINC01108-202ENST00000635227 LRFN4Q6PJG9 635 aa10.62□□□□□ -0.71
LINC01108-202ENST00000635227 JARID2Q92833 1246 aaPredicted RBP10.62□□□□□ -0.71
LINC01108-202ENST00000635227 ATXN3LQ9H3M9 355 aa10.62□□□□□ -0.71
LINC01108-202ENST00000635227 SEMA6BQ9H3T3 888 aa10.62□□□□□ -0.71
LINC01108-202ENST00000635227 ACSS3Q9H6R3 686 aa10.62□□□□□ -0.71
LINC01108-202ENST00000635227 C7orf69Q9H7B7 122 aa10.62□□□□□ -0.71
LINC01108-202ENST00000635227 METTL5Q9NRN9 209 aaKnown RBP10.62□□□□□ -0.71
LINC01108-202ENST00000635227 VPS8Q8N3P4 1428 aa10.61□□□□□ -0.71
LINC01108-202ENST00000635227 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.61□□□□□ -0.71
LINC01108-202ENST00000635227 NFICP08651 508 aa10.61□□□□□ -0.71
LINC01108-202ENST00000635227 HCLS1P14317 486 aaPredicted RBP10.61□□□□□ -0.71
LINC01108-202ENST00000635227 LMNB2Q03252 620 aa10.61□□□□□ -0.71
LINC01108-202ENST00000635227 PPM1JQ5JR12 505 aa10.61□□□□□ -0.71
LINC01108-202ENST00000635227 BNC2Q6ZN30 1099 aaPredicted RBP10.61□□□□□ -0.71
LINC01108-202ENST00000635227 CLEC10AQ8IUN9 316 aa10.61□□□□□ -0.71
LINC01108-202ENST00000635227 EZH1Q92800 747 aaPredicted RBP10.61□□□□□ -0.71
LINC01108-202ENST00000635227 PLPPR2Q96GM1 343 aa10.61□□□□□ -0.71
LINC01108-202ENST00000635227 FAM83CQ9BQN1 747 aa10.61□□□□□ -0.71
LINC01108-202ENST00000635227 SEMA6CQ9H3T2 930 aa10.61□□□□□ -0.71
LINC01108-202ENST00000635227 ADCY10Q96PN6 1610 aa10.61□□□□□ -0.71
LINC01108-202ENST00000635227 NEFMP07197 916 aa10.6□□□□□ -0.71
LINC01108-202ENST00000635227 RING1Q06587 406 aa10.6□□□□□ -0.71
LINC01108-202ENST00000635227 RNF34Q969K3 372 aa10.6□□□□□ -0.71
LINC01108-202ENST00000635227 ELMO3Q96BJ8 720 aa10.6□□□□□ -0.71
LINC01108-202ENST00000635227 ADAMTSL3P82987 1691 aa10.6□□□□□ -0.71
LINC01108-202ENST00000635227 CTTNBP2Q8WZ74 1663 aa10.6□□□□□ -0.71
LINC01108-202ENST00000635227 FAM95CA0A1B0GW59 222 aa10.59□□□□□ -0.71
LINC01108-202ENST00000635227 GARTP22102 1010 aa10.59□□□□□ -0.71
LINC01108-202ENST00000635227 ITGB7P26010 798 aa10.59□□□□□ -0.71
LINC01108-202ENST00000635227 NFKBIBQ15653 356 aa10.59□□□□□ -0.71
LINC01108-202ENST00000635227 WIPI1Q5MNZ9 446 aaPredicted RBP10.59□□□□□ -0.71
LINC01108-202ENST00000635227 PIDD1Q9HB75 910 aa10.59□□□□□ -0.71
LINC01108-202ENST00000635227 DYNC1LI2O43237 492 aaPredicted RBP10.58□□□□□ -0.72
LINC01108-202ENST00000635227 F13A1P00488 732 aa10.58□□□□□ -0.72
LINC01108-202ENST00000635227 NTF4P34130 210 aa10.58□□□□□ -0.72
LINC01108-202ENST00000635227 ZNF394Q53GI3 561 aa10.58□□□□□ -0.72
LINC01108-202ENST00000635227 C9orf131Q5VYM1 1079 aa10.58□□□□□ -0.72
LINC01108-202ENST00000635227 CYFIP1Q7L576 1253 aa10.58□□□□□ -0.72
LINC01108-202ENST00000635227 METTL16Q86W50 562 aaKnown RBP10.58□□□□□ -0.72
LINC01108-202ENST00000635227 GOLM1Q8NBJ4 401 aa10.58□□□□□ -0.72
LINC01108-202ENST00000635227 RNF214Q8ND24 703 aa10.58□□□□□ -0.72
LINC01108-202ENST00000635227 YIPF2Q9BWQ6 316 aa10.58□□□□□ -0.72
LINC01108-202ENST00000635227 LGR6Q9HBX8 967 aa10.58□□□□□ -0.72
LINC01108-202ENST00000635227 DAGLAQ9Y4D2 1042 aa10.58□□□□□ -0.72
LINC01108-202ENST00000635227 PCDHGB7Q9Y5F8 929 aa10.58□□□□□ -0.72
LINC01108-202ENST00000635227 PRAMEF27A3QJZ7 478 aa10.57□□□□□ -0.72
LINC01108-202ENST00000635227 FAM221AA4D161 298 aa10.57□□□□□ -0.72
LINC01108-202ENST00000635227 K7ELQ4 463 aaPredicted RBP10.57□□□□□ -0.72
LINC01108-202ENST00000635227 RNGTTO60942 597 aaKnown RBP10.57□□□□□ -0.72
LINC01108-202ENST00000635227 EIF4A3P38919 411 aaKnown RBP10.57□□□□□ -0.72
LINC01108-202ENST00000635227 HDLBPQ00341 1268 aaKnown RBP10.57□□□□□ -0.72
LINC01108-202ENST00000635227 SNAP47Q5SQN1 464 aa10.57□□□□□ -0.72
LINC01108-202ENST00000635227 FBXL19Q6PCT2 694 aa10.57□□□□□ -0.72
LINC01108-202ENST00000635227 HDXQ7Z353 690 aa10.57□□□□□ -0.72
LINC01108-202ENST00000635227 CCDC84Q86UT8 332 aaPredicted RBP10.57□□□□□ -0.72
LINC01108-202ENST00000635227 ADAMTS1Q9UHI8 967 aa10.57□□□□□ -0.72
LINC01108-202ENST00000635227 GFRA2O00451 464 aa10.56□□□□□ -0.72
LINC01108-202ENST00000635227 FSTP19883 344 aa10.56□□□□□ -0.72
LINC01108-202ENST00000635227 PRSS36Q5K4E3 855 aa10.56□□□□□ -0.72
LINC01108-202ENST00000635227 ZBTB37Q5TC79 503 aa10.56□□□□□ -0.72
LINC01108-202ENST00000635227 USP48Q86UV5 1035 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms