RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 ERC1Q8IUD2 1116 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 AFAP1Q8N556 730 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 ARL6IP6Q8N6S5 226 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 RTF1Q92541 710 aaKnown RBP4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 CCDC102AQ96A19 550 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 JAKMIP2Q96AA8 810 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 PAWRQ96IZ0 340 aaKnown RBP4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 PLEKHG4BQ96PX9 1271 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 VRTNQ9H8Y1 702 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 PLSCR2Q9NRY7 297 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 IGSF5Q9NSI5 407 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 TUBA8Q9NY65 449 aaPredicted RBP4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 CARD8Q9Y2G2 431 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 ANGPTL3Q9Y5C1 460 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 C3P01024 1663 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 MTUS2Q5JR59 1369 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 ZFYVE16Q7Z3T8 1539 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 A0A1W2PRQ8 180 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 REC8O95072 547 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 CCNCP24863 283 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 NYAP1Q6ZVC0 841 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 PDCD7Q8N8D1 485 aaKnown RBP4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 ANKRD49Q8WVL7 239 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.39□□□□□ -1.717e-13■□□□□ 9.5
R3HDM1-220ENST00000628915 AP1M1Q9BXS5 423 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 ACBD3Q9H3P7 528 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 PCSK1NQ9UHG2 260 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 CNPY2Q9Y2B0 182 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 DAAM1Q9Y4D1 1078 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 PLA2R1Q13018 1463 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 NWD1Q149M9 1564 aa4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 F8VZ95 297 aa4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 G3V3G9 751 aa4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 ATP6V1G1O75348 118 aa4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 ATF3P18847 181 aa4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 EPS15P42566 896 aa4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 CCDC40Q4G0X9 1142 aa4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 DRAXINQ8NBI3 349 aaPredicted RBP4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 SYNCQ9H7C4 482 aa4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 PCDH12Q9NPG4 1184 aa4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 DCAF16Q9NXF7 216 aa4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 GCC2Q8IWJ2 1684 aa4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 STMND1H3BQB6 276 aa4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 HARSP12081 509 aaKnown RBP4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 HSPA1LP34931 641 aa4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 Q4G0T1 1027 aa4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 SH2D4BQ5SQS7 431 aa4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 IFFO2Q5TF58 517 aa4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 CEP135Q66GS9 1140 aa4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 MCTP1Q6DN14 999 aa4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 SYT10Q6XYQ8 523 aa4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 PPP1R21Q6ZMI0 780 aa4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 SPATA21Q7Z572 469 aa4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 ZNF397Q8NF99 534 aaPredicted RBP4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 CCDC110Q8TBZ0 833 aa4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 ZNF512BQ96KM6 892 aaPredicted RBP4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 C8orf37Q96NL8 207 aa4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 AGAP3Q96P47 875 aa4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 TRPC6Q9Y210 931 aa4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 ROCK1Q13464 1354 aa4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 HNRNPCP07910 306 aaKnown RBP eCLIP4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 MYL3P08590 195 aa4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 ELF1P32519 619 aa4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 MAGEA9P43362 315 aa4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 MAP7Q14244 749 aa4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 ANKRD1Q15327 319 aa4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 PREPLQ4J6C6 727 aaPredicted RBP4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 CTCFLQ8NI51 663 aaPredicted RBP4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 GOLGA5Q8TBA6 731 aa4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 ABCG4Q9H172 646 aa4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 OCEL1Q9H607 264 aa4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 FANCFQ9NPI8 374 aa4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 LUC7LQ9NQ29 371 aaKnown RBP4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 POGZQ7Z3K3 1410 aa4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 NKTRP30414 1462 aaKnown RBP4.38□□□□□ -1.71
R3HDM1-220ENST00000628915 SART1O43290 800 aaKnown RBP4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 DNAJC6O75061 913 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 VIL1P09327 827 aaKnown RBP4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 IDEP14735 1019 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 TUFMP49411 452 aaKnown RBP4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 MUM1L1Q5H9M0 696 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 METTL24Q5JXM2 366 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 PPP1R14CQ8TAE6 165 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 TRIM63Q969Q1 353 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 ZBTB10Q96DT7 871 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 L3MBTL3Q96JM7 780 aaPredicted RBP4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 SPAG5Q96R06 1193 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 TTC12Q9H892 705 aaPredicted RBP4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 GPCPD1Q9NPB8 672 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 DDX56Q9NY93 547 aaKnown RBP4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 MTUS1Q9ULD2 1270 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 ZNF711Q9Y462 761 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 UNC13BO14795 1591 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 RAD50Q92878 1312 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 MYO3AQ8NEV4 1616 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 TCOF1Q13428 1488 aaKnown RBP4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 SAMD9LQ8IVG5 1584 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 FOXN3O00409 490 aaPredicted RBP4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 TBX3O15119 743 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms