RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 TM4SF4P48230 202 aa16.85■□□□□ 0.29
SNRPA1-216ENST00000626000 GTF2A2P52657 109 aa16.85■□□□□ 0.29
SNRPA1-216ENST00000626000 DYNLL1P63167 89 aaKnown RBP16.85■□□□□ 0.29
SNRPA1-216ENST00000626000 TSHZ3Q63HK5 1081 aa16.85■□□□□ 0.29
SNRPA1-216ENST00000626000 SH3BP5LQ7L8J4 393 aa16.85■□□□□ 0.29
SNRPA1-216ENST00000626000 METTL16Q86W50 562 aaKnown RBP16.85■□□□□ 0.29
SNRPA1-216ENST00000626000 ZFPM1Q8IX07 1006 aa16.85■□□□□ 0.29
SNRPA1-216ENST00000626000 OPTNQ96CV9 577 aa16.85■□□□□ 0.29
SNRPA1-216ENST00000626000 CLMNQ96JQ2 1002 aa16.85■□□□□ 0.29
SNRPA1-216ENST00000626000 ELP3Q9H9T3 547 aa16.85■□□□□ 0.29
SNRPA1-216ENST00000626000 MYH1P12882 1939 aa16.85■□□□□ 0.29
SNRPA1-216ENST00000626000 NAV1Q8NEY1 1877 aa16.84■□□□□ 0.29
SNRPA1-216ENST00000626000 MBD4O95243 580 aa16.84■□□□□ 0.29
SNRPA1-216ENST00000626000 PPIL2Q13356 520 aa16.84■□□□□ 0.29
SNRPA1-216ENST00000626000 GIMAP6Q6P9H5 292 aa16.84■□□□□ 0.29
SNRPA1-216ENST00000626000 SCYL3Q8IZE3 742 aa16.84■□□□□ 0.29
SNRPA1-216ENST00000626000 OTUD7AQ8TE49 926 aaPredicted RBP16.84■□□□□ 0.29
SNRPA1-216ENST00000626000 FZD1Q9UP38 647 aa16.84■□□□□ 0.29
SNRPA1-216ENST00000626000 SNCAIPQ9Y6H5 919 aa16.84■□□□□ 0.29
SNRPA1-216ENST00000626000 DOCK1Q14185 1865 aa16.84■□□□□ 0.29
SNRPA1-216ENST00000626000 SNAPC2Q13487 334 aa16.83■□□□□ 0.28
SNRPA1-216ENST00000626000 ZCCHC17Q9NP64 241 aaKnown RBP16.83■□□□□ 0.28
SNRPA1-216ENST00000626000 SERPINB13Q9UIV8 391 aa16.83■□□□□ 0.28
SNRPA1-216ENST00000626000 DDX60LQ5H9U9 1706 aaKnown RBP16.82■□□□□ 0.28
SNRPA1-216ENST00000626000 PHF20L1A8MW92 1017 aa16.82■□□□□ 0.28
SNRPA1-216ENST00000626000 POLR3DP05423 398 aaPredicted RBP16.82■□□□□ 0.28
SNRPA1-216ENST00000626000 ASNSP08243 561 aa16.82■□□□□ 0.28
SNRPA1-216ENST00000626000 CETPP11597 493 aa16.82■□□□□ 0.28
SNRPA1-216ENST00000626000 INPP5BP32019 993 aa16.82■□□□□ 0.28
SNRPA1-216ENST00000626000 CENPQQ7L2Z9 268 aaPredicted RBP16.82■□□□□ 0.28
SNRPA1-216ENST00000626000 LCORLQ8N3X6 602 aa16.82■□□□□ 0.28
SNRPA1-216ENST00000626000 ZKSCAN4Q969J2 545 aaPredicted RBP16.82■□□□□ 0.28
SNRPA1-216ENST00000626000 OTUD5Q96G74 571 aa16.82■□□□□ 0.28
SNRPA1-216ENST00000626000 ARMT1Q9H993 441 aa16.82■□□□□ 0.28
SNRPA1-216ENST00000626000 PRDM10Q9NQV6 1147 aa16.82■□□□□ 0.28
SNRPA1-216ENST00000626000 PALD1Q9ULE6 856 aa16.82■□□□□ 0.28
SNRPA1-216ENST00000626000 TESPA1A2RU30 521 aaPredicted RBP16.81■□□□□ 0.28
SNRPA1-216ENST00000626000 HIP1O00291 1037 aa16.81■□□□□ 0.28
SNRPA1-216ENST00000626000 ERICH6BQ5W0A0 696 aa16.81■□□□□ 0.28
SNRPA1-216ENST00000626000 PLEKHM2Q8IWE5 1019 aa16.81■□□□□ 0.28
SNRPA1-216ENST00000626000 CFHR5Q9BXR6 569 aa16.81■□□□□ 0.28
SNRPA1-216ENST00000626000 NACAP1Q9BZK3 213 aa16.81■□□□□ 0.28
SNRPA1-216ENST00000626000 DCP1AQ9NPI6 582 aaPredicted RBP16.81■□□□□ 0.28
SNRPA1-216ENST00000626000 MCM9Q9NXL9 1143 aa16.81■□□□□ 0.28
SNRPA1-216ENST00000626000 ARPP21Q9UBL0 812 aaPredicted RBP16.81■□□□□ 0.28
SNRPA1-216ENST00000626000 SWAP70Q9UH65 585 aa16.81■□□□□ 0.28
SNRPA1-216ENST00000626000 PCNTO95613 3336 aa16.8■□□□□ 0.28
SNRPA1-216ENST00000626000 TRIM6-TRIM34B2RNG4 842 aa16.8■□□□□ 0.28
SNRPA1-216ENST00000626000 CXCL11O14625 94 aa16.8■□□□□ 0.28
SNRPA1-216ENST00000626000 CAP2P40123 477 aa16.8■□□□□ 0.28
SNRPA1-216ENST00000626000 NOM1Q5C9Z4 860 aaKnown RBP16.8■□□□□ 0.28
SNRPA1-216ENST00000626000 AS3MTQ9HBK9 375 aa16.8■□□□□ 0.28
SNRPA1-216ENST00000626000 SAP30BPQ9UHR5 308 aaKnown RBP16.8■□□□□ 0.28
SNRPA1-216ENST00000626000 SLC4A4Q9Y6R1 1079 aa16.8■□□□□ 0.28
SNRPA1-216ENST00000626000 FOXN1O15353 648 aa16.79■□□□□ 0.28
SNRPA1-216ENST00000626000 GPAA1O43292 621 aa16.79■□□□□ 0.28
SNRPA1-216ENST00000626000 MFAP1P55081 439 aaKnown RBP16.79■□□□□ 0.28
SNRPA1-216ENST00000626000 MKRN3Q13064 507 aaKnown RBP16.79■□□□□ 0.28
SNRPA1-216ENST00000626000 ZMYM1Q5SVZ6 1142 aa16.79■□□□□ 0.28
SNRPA1-216ENST00000626000 STRBPQ96SI9 672 aaKnown RBP16.79■□□□□ 0.28
SNRPA1-216ENST00000626000 PUS7LQ9H0K6 701 aaKnown RBP16.79■□□□□ 0.28
SNRPA1-216ENST00000626000 ZNF287Q9HBT7 754 aa16.79■□□□□ 0.28
SNRPA1-216ENST00000626000 HELLSQ9NRZ9 838 aa16.79■□□□□ 0.28
SNRPA1-216ENST00000626000 RNF186Q9NXI6 227 aa16.79■□□□□ 0.28
SNRPA1-216ENST00000626000 KCNH4Q9UQ05 1017 aa16.79■□□□□ 0.28
SNRPA1-216ENST00000626000 SIPA1L1O43166 1804 aa16.78■□□□□ 0.28
SNRPA1-216ENST00000626000 PTPRAP18433 802 aa16.78■□□□□ 0.28
SNRPA1-216ENST00000626000 FASTKD5Q7L8L6 764 aaKnown RBP16.78■□□□□ 0.28
SNRPA1-216ENST00000626000 IFNL1Q8IU54 200 aa16.78■□□□□ 0.28
SNRPA1-216ENST00000626000 SDR42E1Q8WUS8 393 aa16.78■□□□□ 0.28
SNRPA1-216ENST00000626000 OSBP2Q969R2 916 aa16.78■□□□□ 0.28
SNRPA1-216ENST00000626000 ZIC5Q96T25 663 aa16.78■□□□□ 0.28
SNRPA1-216ENST00000626000 ATAD5Q96QE3 1844 aa16.77■□□□□ 0.28
SNRPA1-216ENST00000626000 CCL15-CCL14A0A0B4J2E2 113 aa16.77■□□□□ 0.28
SNRPA1-216ENST00000626000 USP17L5A8MUK1 530 aa16.77■□□□□ 0.28
SNRPA1-216ENST00000626000 IRF6O14896 467 aa16.77■□□□□ 0.28
SNRPA1-216ENST00000626000 HSPA8P11142 646 aaKnown RBP16.77■□□□□ 0.28
SNRPA1-216ENST00000626000 CCL15Q16663 113 aa16.77■□□□□ 0.28
SNRPA1-216ENST00000626000 TATDN1Q6P1N9 297 aa16.77■□□□□ 0.28
SNRPA1-216ENST00000626000 MS4A4AQ96JQ5 239 aa16.77■□□□□ 0.28
SNRPA1-216ENST00000626000 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.77■□□□□ 0.28
SNRPA1-216ENST00000626000 TRPA1O75762 1119 aa16.76■□□□□ 0.27
SNRPA1-216ENST00000626000 GJA5P36382 358 aa16.76■□□□□ 0.27
SNRPA1-216ENST00000626000 SBK1Q52WX2 424 aa16.76■□□□□ 0.27
SNRPA1-216ENST00000626000 RILPL2Q969X0 211 aa16.76■□□□□ 0.27
SNRPA1-216ENST00000626000 CCDC136Q96JN2 1154 aa16.76■□□□□ 0.27
SNRPA1-216ENST00000626000 CCDC17Q96LX7 622 aa16.76■□□□□ 0.27
SNRPA1-216ENST00000626000 CABP5Q9NP86 173 aa16.76■□□□□ 0.27
SNRPA1-216ENST00000626000 ZHX2Q9Y6X8 837 aa16.76■□□□□ 0.27
SNRPA1-216ENST00000626000 PATL2C9JE40 543 aaKnown RBP16.75■□□□□ 0.27
SNRPA1-216ENST00000626000 SLC3A2P08195 630 aaKnown RBP16.75■□□□□ 0.27
SNRPA1-216ENST00000626000 TDO2P48775 406 aa16.75■□□□□ 0.27
SNRPA1-216ENST00000626000 GABPAQ06546 454 aa16.75■□□□□ 0.27
SNRPA1-216ENST00000626000 C12orf60Q5U649 245 aa16.75■□□□□ 0.27
SNRPA1-216ENST00000626000 ZNF280CQ8ND82 737 aa16.75■□□□□ 0.27
SNRPA1-216ENST00000626000 WDR18Q9BV38 432 aa16.75■□□□□ 0.27
SNRPA1-216ENST00000626000 DNAJC18Q9H819 358 aa16.75■□□□□ 0.27
SNRPA1-216ENST00000626000 DIAPH3Q9NSV4 1193 aa16.75■□□□□ 0.27
SNRPA1-216ENST00000626000 AFG3L2Q9Y4W6 797 aa16.75■□□□□ 0.27
SNRPA1-216ENST00000626000 MYH8P13535 1937 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms