RNA–Protein interactions for RNA: ENST00000619890.1

SSX4B-202, Transcript of SSX family member 4B, humanhuman

TSL 5 BASIC

Gene SSX4B, Length 1,092 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-202ENST00000619890 TNNQ9UQP3 1299 aa7.47□□□□□ -1.21
SSX4B-202ENST00000619890 AKAP2Q9Y2D5 859 aa7.47□□□□□ -1.21
SSX4B-202ENST00000619890 SUGT1Q9Y2Z0 365 aa7.47□□□□□ -1.21
SSX4B-202ENST00000619890 PPP2R3BQ9Y5P8 575 aa7.47□□□□□ -1.21
SSX4B-202ENST00000619890 CACNA1AO00555 2505 aa7.47□□□□□ -1.21
SSX4B-202ENST00000619890 PDS5AQ29RF7 1337 aaKnown RBP7.47□□□□□ -1.21
SSX4B-202ENST00000619890 LAMB1P07942 1786 aa7.46□□□□□ -1.21
SSX4B-202ENST00000619890 FRAT2O75474 233 aaPredicted RBP7.46□□□□□ -1.22
SSX4B-202ENST00000619890 SGPL1O95470 568 aa7.46□□□□□ -1.22
SSX4B-202ENST00000619890 RLBP1P12271 317 aa7.46□□□□□ -1.22
SSX4B-202ENST00000619890 GRK4P32298 578 aa7.46□□□□□ -1.22
SSX4B-202ENST00000619890 LACTBP83111 547 aaPredicted RBP7.46□□□□□ -1.22
SSX4B-202ENST00000619890 MVPQ14764 893 aaKnown RBP7.46□□□□□ -1.22
SSX4B-202ENST00000619890 DLGAP5Q15398 846 aa7.46□□□□□ -1.22
SSX4B-202ENST00000619890 TAF1CQ15572 869 aaPredicted RBP7.46□□□□□ -1.22
SSX4B-202ENST00000619890 CERS5Q8N5B7 392 aa7.46□□□□□ -1.22
SSX4B-202ENST00000619890 WDR66Q8TBY9 1149 aa7.46□□□□□ -1.22
SSX4B-202ENST00000619890 SNX27Q96L92 541 aa7.46□□□□□ -1.22
SSX4B-202ENST00000619890 FAM161BQ96MY7 647 aa7.46□□□□□ -1.22
SSX4B-202ENST00000619890 SERPINA10Q9UK55 444 aa7.46□□□□□ -1.22
SSX4B-202ENST00000619890 LHX6Q9UPM6 363 aa7.46□□□□□ -1.22
SSX4B-202ENST00000619890 SYNGAP1Q96PV0 1343 aa7.46□□□□□ -1.22
SSX4B-202ENST00000619890 TMEM265A0A087WTH1 108 aa7.45□□□□□ -1.22
SSX4B-202ENST00000619890 PPP1R12BO60237 982 aaPredicted RBP7.45□□□□□ -1.22
SSX4B-202ENST00000619890 PPP1R37O75864 691 aa7.45□□□□□ -1.22
SSX4B-202ENST00000619890 MAGEA10P43363 369 aaPredicted RBP7.45□□□□□ -1.22
SSX4B-202ENST00000619890 HDLBPQ00341 1268 aaKnown RBP7.45□□□□□ -1.22
SSX4B-202ENST00000619890 G3BP1Q13283 466 aaKnown RBP eCLIP7.45□□□□□ -1.22
SSX4B-202ENST00000619890 TNFAIP1Q13829 316 aa7.45□□□□□ -1.22
SSX4B-202ENST00000619890 PDE3AQ14432 1141 aa7.45□□□□□ -1.22
SSX4B-202ENST00000619890 KIF22Q14807 665 aa7.45□□□□□ -1.22
SSX4B-202ENST00000619890 ZGPATQ8N5A5 531 aaKnown RBP7.45□□□□□ -1.22
SSX4B-202ENST00000619890 MAFAQ8NHW3 353 aaPredicted RBP7.45□□□□□ -1.22
SSX4B-202ENST00000619890 SSH3Q8TE77 659 aa7.45□□□□□ -1.22
SSX4B-202ENST00000619890 BRI3BPQ8WY22 251 aa7.45□□□□□ -1.22
SSX4B-202ENST00000619890 ZBED3Q96IU2 234 aaPredicted RBP7.45□□□□□ -1.22
SSX4B-202ENST00000619890 MXD3Q9BW11 206 aa7.45□□□□□ -1.22
SSX4B-202ENST00000619890 GPR108Q9NPR9 543 aa7.45□□□□□ -1.22
SSX4B-202ENST00000619890 SRRDQ9UH36 339 aa7.45□□□□□ -1.22
SSX4B-202ENST00000619890 DENND2AQ9ULE3 1009 aa7.45□□□□□ -1.22
SSX4B-202ENST00000619890 ZMYND8Q9ULU4 1186 aaPredicted RBP7.45□□□□□ -1.22
SSX4B-202ENST00000619890 PA2G4Q9UQ80 394 aaKnown RBP7.45□□□□□ -1.22
SSX4B-202ENST00000619890 SALL1Q9NSC2 1324 aa7.45□□□□□ -1.22
SSX4B-202ENST00000619890 PNMA6EA0A0J9YXQ4 647 aa7.44□□□□□ -1.22
SSX4B-202ENST00000619890 A0A1B0GUL7 405 aa7.44□□□□□ -1.22
SSX4B-202ENST00000619890 TLR2O60603 784 aa7.44□□□□□ -1.22
SSX4B-202ENST00000619890 HMMRO75330 724 aa7.44□□□□□ -1.22
SSX4B-202ENST00000619890 USP2O75604 605 aaPredicted RBP7.44□□□□□ -1.22
SSX4B-202ENST00000619890 CTGFP29279 349 aa7.44□□□□□ -1.22
SSX4B-202ENST00000619890 ATP8B2P98198 1209 aa7.44□□□□□ -1.22
SSX4B-202ENST00000619890 CHAF1AQ13111 956 aaPredicted RBP7.44□□□□□ -1.22
SSX4B-202ENST00000619890 CFAP100Q494V2 611 aa7.44□□□□□ -1.22
SSX4B-202ENST00000619890 CEP85Q6P2H3 762 aa7.44□□□□□ -1.22
SSX4B-202ENST00000619890 ERC1Q8IUD2 1116 aa7.44□□□□□ -1.22
SSX4B-202ENST00000619890 FAM43AQ8N2R8 423 aa7.44□□□□□ -1.22
SSX4B-202ENST00000619890 PANK1Q8TE04 598 aa7.44□□□□□ -1.22
SSX4B-202ENST00000619890 PTCD2Q8WV60 388 aaKnown RBP7.44□□□□□ -1.22
SSX4B-202ENST00000619890 TEKT1Q969V4 418 aa7.44□□□□□ -1.22
SSX4B-202ENST00000619890 PAWRQ96IZ0 340 aaKnown RBP7.44□□□□□ -1.22
SSX4B-202ENST00000619890 CDX2Q99626 313 aaPredicted RBP7.44□□□□□ -1.22
SSX4B-202ENST00000619890 UBE2OQ9C0C9 1292 aaKnown RBP7.44□□□□□ -1.22
SSX4B-202ENST00000619890 DEFB129Q9H1M3 183 aa7.44□□□□□ -1.22
SSX4B-202ENST00000619890 TTF2Q9UNY4 1162 aaKnown RBP7.44□□□□□ -1.22
SSX4B-202ENST00000619890 CDH23Q9H251 3354 aa7.44□□□□□ -1.22
SSX4B-202ENST00000619890 RPAP1Q9BWH6 1393 aaPredicted RBP7.44□□□□□ -1.22
SSX4B-202ENST00000619890 DOCK2Q92608 1830 aa7.43□□□□□ -1.22
SSX4B-202ENST00000619890 OTOFQ9HC10 1997 aa7.43□□□□□ -1.22
SSX4B-202ENST00000619890 F8W031 263 aaPredicted RBP7.43□□□□□ -1.22
SSX4B-202ENST00000619890 IGSF3O75054 1194 aa7.43□□□□□ -1.22
SSX4B-202ENST00000619890 TFRCP02786 760 aaKnown RBP7.43□□□□□ -1.22
SSX4B-202ENST00000619890 SYN1P17600 705 aa7.43□□□□□ -1.22
SSX4B-202ENST00000619890 CAPN2P17655 700 aa7.43□□□□□ -1.22
SSX4B-202ENST00000619890 TNNI2P48788 182 aa7.43□□□□□ -1.22
SSX4B-202ENST00000619890 RBM5P52756 815 aaKnown RBP eCLIP7.43□□□□□ -1.22
SSX4B-202ENST00000619890 FOXK1P85037 733 aa7.43□□□□□ -1.22
SSX4B-202ENST00000619890 TFCP2Q12800 502 aa7.43□□□□□ -1.22
SSX4B-202ENST00000619890 OS9Q13438 667 aaPredicted RBP7.43□□□□□ -1.22
SSX4B-202ENST00000619890 HSP90AB4PQ58FF6 505 aa7.43□□□□□ -1.22
SSX4B-202ENST00000619890 TJAP1Q5JTD0 557 aa7.43□□□□□ -1.22
SSX4B-202ENST00000619890 CCDC102BQ68D86 513 aa7.43□□□□□ -1.22
SSX4B-202ENST00000619890 RPAP2Q8IXW5 612 aaPredicted RBP7.43□□□□□ -1.22
SSX4B-202ENST00000619890 C7orf61Q8IZ16 206 aa7.43□□□□□ -1.22
SSX4B-202ENST00000619890 RAET1EQ8TD07 263 aa7.43□□□□□ -1.22
SSX4B-202ENST00000619890 TRIM47Q96LD4 638 aa7.43□□□□□ -1.22
SSX4B-202ENST00000619890 MRIQ9BWK5 157 aa7.43□□□□□ -1.22
SSX4B-202ENST00000619890 UNC93B1Q9H1C4 597 aa7.43□□□□□ -1.22
SSX4B-202ENST00000619890 C1orf115Q9H7X2 142 aa7.43□□□□□ -1.22
SSX4B-202ENST00000619890 TMOD2Q9NZR1 351 aa7.43□□□□□ -1.22
SSX4B-202ENST00000619890 BIN2Q9UBW5 565 aaPredicted RBP7.43□□□□□ -1.22
SSX4B-202ENST00000619890 IQSEC3Q9UPP2 1182 aaPredicted RBP7.43□□□□□ -1.22
SSX4B-202ENST00000619890 JAG2Q9Y219 1238 aa7.43□□□□□ -1.22
SSX4B-202ENST00000619890 NOP58Q9Y2X3 529 aaKnown RBP7.43□□□□□ -1.22
SSX4B-202ENST00000619890 ARIH1Q9Y4X5 557 aaPredicted RBP7.43□□□□□ -1.22
SSX4B-202ENST00000619890 MYH2Q9UKX2 1941 aa7.42□□□□□ -1.22
SSX4B-202ENST00000619890 CCL15-CCL14A0A0B4J2E2 113 aa7.42□□□□□ -1.22
SSX4B-202ENST00000619890 SURF6O75683 361 aaKnown RBP7.42□□□□□ -1.22
SSX4B-202ENST00000619890 CENPBP07199 599 aaPredicted RBP7.42□□□□□ -1.22
SSX4B-202ENST00000619890 UQCRFS1P1P0C7P4 283 aa7.42□□□□□ -1.22
SSX4B-202ENST00000619890 OSBPP22059 807 aa7.42□□□□□ -1.22
SSX4B-202ENST00000619890 ARID4AP29374 1257 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms