RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 ADAMTSL1Q8N6G6 1762 aa5.52□□□□□ -1.53
SYCP1-210ENST00000618516 NMT2O60551 498 aa5.52□□□□□ -1.53
SYCP1-210ENST00000618516 HMGCS2P54868 508 aa5.52□□□□□ -1.53
SYCP1-210ENST00000618516 RHBDL3P58872 404 aa5.52□□□□□ -1.53
SYCP1-210ENST00000618516 KIF23Q02241 960 aaPredicted RBP5.52□□□□□ -1.53
SYCP1-210ENST00000618516 TTF1Q15361 905 aaPredicted RBP5.52□□□□□ -1.53
SYCP1-210ENST00000618516 KBTBD3Q8NAB2 608 aa5.52□□□□□ -1.53
SYCP1-210ENST00000618516 PICK1Q9NRD5 415 aa5.52□□□□□ -1.53
SYCP1-210ENST00000618516 MAST3O60307 1309 aa5.52□□□□□ -1.53
SYCP1-210ENST00000618516 TIAM2Q8IVF5 1701 aa5.52□□□□□ -1.53
SYCP1-210ENST00000618516 MYH13Q9UKX3 1938 aa5.52□□□□□ -1.53
SYCP1-210ENST00000618516 RNF113AO15541 343 aaKnown RBP5.52□□□□□ -1.53
SYCP1-210ENST00000618516 CYP2C8P10632 490 aa5.52□□□□□ -1.53
SYCP1-210ENST00000618516 LBX1P52954 281 aa5.52□□□□□ -1.53
SYCP1-210ENST00000618516 MFAP1P55081 439 aaKnown RBP5.52□□□□□ -1.53
SYCP1-210ENST00000618516 SMC5Q8IY18 1101 aa5.52□□□□□ -1.53
SYCP1-210ENST00000618516 CCDC82Q8N4S0 544 aa5.52□□□□□ -1.53
SYCP1-210ENST00000618516 PAGR1Q9BTK6 254 aa5.52□□□□□ -1.53
SYCP1-210ENST00000618516 VPS33BQ9H267 617 aa5.52□□□□□ -1.53
SYCP1-210ENST00000618516 ZC3H4Q9UPT8 1303 aaKnown RBP5.52□□□□□ -1.53
SYCP1-210ENST00000618516 LTBP1Q14766 1721 aa5.52□□□□□ -1.53
SYCP1-210ENST00000618516 RBAK-RBAKDNI3L0D1 243 aa5.52□□□□□ -1.53
SYCP1-210ENST00000618516 HLA-DOAP06340 250 aa5.52□□□□□ -1.53
SYCP1-210ENST00000618516 HSPA1AP0DMV8 641 aaKnown RBP5.52□□□□□ -1.53
SYCP1-210ENST00000618516 HSPA1BP0DMV9 641 aaKnown RBP5.52□□□□□ -1.53
SYCP1-210ENST00000618516 ADD2P35612 726 aa5.52□□□□□ -1.53
SYCP1-210ENST00000618516 IREB2P48200 963 aaKnown RBP5.52□□□□□ -1.53
SYCP1-210ENST00000618516 PLS1Q14651 629 aa5.52□□□□□ -1.53
SYCP1-210ENST00000618516 RGMBQ6NW40 437 aa5.52□□□□□ -1.53
SYCP1-210ENST00000618516 NUP88Q99567 741 aaPredicted RBP5.52□□□□□ -1.53
SYCP1-210ENST00000618516 PPP4R2Q9NY27 417 aa5.52□□□□□ -1.53
SYCP1-210ENST00000618516 WDR33Q9C0J8 1336 aaKnown RBP5.52□□□□□ -1.53
SYCP1-210ENST00000618516 DHX16O60231 1041 aaKnown RBP5.51□□□□□ -1.53
SYCP1-210ENST00000618516 USP2O75604 605 aaPredicted RBP5.51□□□□□ -1.53
SYCP1-210ENST00000618516 TAL1P17542 331 aaPredicted RBP5.51□□□□□ -1.53
SYCP1-210ENST00000618516 ECE1P42892 770 aa5.51□□□□□ -1.53
SYCP1-210ENST00000618516 SNAP25P60880 206 aa5.51□□□□□ -1.53
SYCP1-210ENST00000618516 JAG1P78504 1218 aa5.51□□□□□ -1.53
SYCP1-210ENST00000618516 RRP1BQ14684 758 aaKnown RBP5.51□□□□□ -1.53
SYCP1-210ENST00000618516 HHIPL2Q6UWX4 724 aa5.51□□□□□ -1.53
SYCP1-210ENST00000618516 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.51□□□□□ -1.53
SYCP1-210ENST00000618516 AMOTL1Q8IY63 956 aa5.51□□□□□ -1.53
SYCP1-210ENST00000618516 CCDC144CPQ8IYA2 1237 aa5.51□□□□□ -1.53
SYCP1-210ENST00000618516 REM2Q8IYK8 340 aaPredicted RBP5.51□□□□□ -1.53
SYCP1-210ENST00000618516 LRRC47Q8N1G4 583 aaKnown RBP5.51□□□□□ -1.53
SYCP1-210ENST00000618516 SMCR8Q8TEV9 937 aaPredicted RBP5.51□□□□□ -1.53
SYCP1-210ENST00000618516 ZNF341Q9BYN7 854 aa5.51□□□□□ -1.53
SYCP1-210ENST00000618516 OSBPL5Q9H0X9 879 aaPredicted RBP5.51□□□□□ -1.53
SYCP1-210ENST00000618516 R3HDMLQ9H3Y0 253 aa5.51□□□□□ -1.53
SYCP1-210ENST00000618516 DCP1AQ9NPI6 582 aaPredicted RBP5.51□□□□□ -1.53
SYCP1-210ENST00000618516 GPR108Q9NPR9 543 aa5.51□□□□□ -1.53
SYCP1-210ENST00000618516 GPR75-ASB3A0A0A6YYF3 556 aa5.51□□□□□ -1.53
SYCP1-210ENST00000618516 SEMA3EO15041 775 aa5.51□□□□□ -1.53
SYCP1-210ENST00000618516 CPA1P15085 419 aa5.51□□□□□ -1.53
SYCP1-210ENST00000618516 RXRAP19793 462 aa5.51□□□□□ -1.53
SYCP1-210ENST00000618516 FSTL1Q12841 308 aa5.51□□□□□ -1.53
SYCP1-210ENST00000618516 MTMR2Q13614 643 aa5.51□□□□□ -1.53
SYCP1-210ENST00000618516 SEPT2Q15019 361 aa5.51□□□□□ -1.53
SYCP1-210ENST00000618516 C15orf52Q6ZUT6 534 aaKnown RBP5.51□□□□□ -1.53
SYCP1-210ENST00000618516 CENPQQ7L2Z9 268 aaPredicted RBP5.51□□□□□ -1.53
SYCP1-210ENST00000618516 ACER1Q8TDN7 264 aa5.51□□□□□ -1.53
SYCP1-210ENST00000618516 ZC3H15Q8WU90 426 aaKnown RBP5.51□□□□□ -1.53
SYCP1-210ENST00000618516 CPVLQ9H3G5 476 aa5.51□□□□□ -1.53
SYCP1-210ENST00000618516 CREBZFQ9NS37 354 aa5.51□□□□□ -1.53
SYCP1-210ENST00000618516 SERPINB13Q9UIV8 391 aa5.51□□□□□ -1.53
SYCP1-210ENST00000618516 TAF6LQ9Y6J9 622 aa5.51□□□□□ -1.53
SYCP1-210ENST00000618516 BAZ2BQ9UIF8 2168 aaKnown RBP5.51□□□□□ -1.53
SYCP1-210ENST00000618516 CCL15-CCL14A0A0B4J2E2 113 aa5.5□□□□□ -1.53
SYCP1-210ENST00000618516 TSPY2A6NKD2 308 aa5.5□□□□□ -1.53
SYCP1-210ENST00000618516 FGD1P98174 961 aa5.5□□□□□ -1.53
SYCP1-210ENST00000618516 CCL15Q16663 113 aa5.5□□□□□ -1.53
SYCP1-210ENST00000618516 CCAR1Q8IX12 1150 aaKnown RBP5.5□□□□□ -1.53
SYCP1-210ENST00000618516 EVI5LQ96CN4 794 aa5.5□□□□□ -1.53
SYCP1-210ENST00000618516 TEPSINQ96N21 525 aa5.5□□□□□ -1.53
SYCP1-210ENST00000618516 CWC22Q9HCG8 908 aaKnown RBP5.5□□□□□ -1.53
SYCP1-210ENST00000618516 HOMER2Q9NSB8 354 aa5.5□□□□□ -1.53
SYCP1-210ENST00000618516 CPA4Q9UI42 421 aa5.5□□□□□ -1.53
SYCP1-210ENST00000618516 DLEC1Q9Y238 1755 aa5.5□□□□□ -1.53
SYCP1-210ENST00000618516 CNTNAP1P78357 1384 aa5.5□□□□□ -1.53
SYCP1-210ENST00000618516 CERKLQ49MI3 558 aaPredicted RBP5.5□□□□□ -1.53
SYCP1-210ENST00000618516 TTC22Q5TAA0 569 aa5.5□□□□□ -1.53
SYCP1-210ENST00000618516 KIAA1211Q6ZU35 1233 aa5.5□□□□□ -1.53
SYCP1-210ENST00000618516 CPXCR1Q8N123 301 aa5.5□□□□□ -1.53
SYCP1-210ENST00000618516 FAM151AQ8WW52 585 aa5.5□□□□□ -1.53
SYCP1-210ENST00000618516 APPBP2Q92624 585 aa5.5□□□□□ -1.53
SYCP1-210ENST00000618516 KLRG1Q96E93 195 aa5.5□□□□□ -1.53
SYCP1-210ENST00000618516 RIOK1Q9BRS2 568 aaKnown RBP5.5□□□□□ -1.53
SYCP1-210ENST00000618516 TANGO6Q9C0B7 1094 aa5.5□□□□□ -1.53
SYCP1-210ENST00000618516 MYO5AQ9Y4I1 1855 aaKnown RBP5.5□□□□□ -1.53
SYCP1-210ENST00000618516 FOXN1O15353 648 aa5.5□□□□□ -1.53
SYCP1-210ENST00000618516 AKR1B1P15121 316 aa5.5□□□□□ -1.53
SYCP1-210ENST00000618516 GJA5P36382 358 aa5.5□□□□□ -1.53
SYCP1-210ENST00000618516 MAP3K9P80192 1104 aa5.5□□□□□ -1.53
SYCP1-210ENST00000618516 PTH1RQ03431 593 aa5.5□□□□□ -1.53
SYCP1-210ENST00000618516 COL9A3Q14050 684 aaPredicted RBP5.5□□□□□ -1.53
SYCP1-210ENST00000618516 TAF1CQ15572 869 aaPredicted RBP5.5□□□□□ -1.53
SYCP1-210ENST00000618516 COL13A1Q5TAT6 717 aaPredicted RBP5.5□□□□□ -1.53
SYCP1-210ENST00000618516 ZSCAN25Q6NSZ9 544 aa5.5□□□□□ -1.53
SYCP1-210ENST00000618516 ANKRD13AQ8IZ07 590 aa5.5□□□□□ -1.53
SYCP1-210ENST00000618516 STRBPQ96SI9 672 aaKnown RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms