RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 PPIL4Q8WUA2 492 aaKnown RBP eCLIP30.69■■■□□ 2.5
VEGFA-228ENST00000617771 DOCK1Q14185 1865 aa30.69■■■□□ 2.5
VEGFA-228ENST00000617771 MYO5AQ9Y4I1 1855 aaKnown RBP30.68■■■□□ 2.5
VEGFA-228ENST00000617771 A0A0G2JLL6 359 aaPredicted RBP30.68■■■□□ 2.5
VEGFA-228ENST00000617771 PRRT2Q7Z6L0 340 aaPredicted RBP30.68■■■□□ 2.5
VEGFA-228ENST00000617771 BCL11AQ9H165 835 aa30.68■■■□□ 2.5
VEGFA-228ENST00000617771 PTPN22Q9Y2R2 807 aa30.68■■■□□ 2.5
VEGFA-228ENST00000617771 KIF22Q14807 665 aa30.67■■■□□ 2.5
VEGFA-228ENST00000617771 DYNLL1P63167 89 aaKnown RBP30.66■■■□□ 2.5
VEGFA-228ENST00000617771 MIGA1Q8NAN2 632 aa30.65■■■□□ 2.5
VEGFA-228ENST00000617771 PARK7Q99497 189 aaKnown RBP30.65■■■□□ 2.5
VEGFA-228ENST00000617771 TRIM34Q9BYJ4 488 aa30.65■■■□□ 2.5
VEGFA-228ENST00000617771 TBC1D2Q9BYX2 928 aa30.65■■■□□ 2.5
VEGFA-228ENST00000617771 GPAT2Q6NUI2 795 aa30.64■■■□□ 2.5
VEGFA-228ENST00000617771 C17orf99Q6UX52 265 aa30.64■■■□□ 2.5
VEGFA-228ENST00000617771 GADL1Q6ZQY3 521 aa30.64■■■□□ 2.5
VEGFA-228ENST00000617771 TRIM75PA6NK02 468 aa30.63■■■□□ 2.49
VEGFA-228ENST00000617771 HLA-DOAP06340 250 aa30.63■■■□□ 2.49
VEGFA-228ENST00000617771 CAP2P40123 477 aa30.63■■■□□ 2.49
VEGFA-228ENST00000617771 CAP1Q01518 475 aa30.63■■■□□ 2.49
VEGFA-228ENST00000617771 FOXP4Q8IVH2 680 aaPredicted RBP30.63■■■□□ 2.49
VEGFA-228ENST00000617771 CRACR2BQ8N4Y2 399 aaPredicted RBP30.63■■■□□ 2.49
VEGFA-228ENST00000617771 DNAJC2Q99543 621 aaKnown RBP30.63■■■□□ 2.49
VEGFA-228ENST00000617771 FRMD4AQ9P2Q2 1039 aaPredicted RBP30.63■■■□□ 2.49
VEGFA-228ENST00000617771 FOCADQ5VW36 1801 aa30.62■■■□□ 2.49
VEGFA-228ENST00000617771 USP5P45974 858 aa30.62■■■□□ 2.49
VEGFA-228ENST00000617771 LACTBP83111 547 aaPredicted RBP30.62■■■□□ 2.49
VEGFA-228ENST00000617771 LRRCC1Q9C099 1032 aa30.62■■■□□ 2.49
VEGFA-228ENST00000617771 CPA4Q9UI42 421 aa30.62■■■□□ 2.49
VEGFA-228ENST00000617771 PALD1Q9ULE6 856 aa30.62■■■□□ 2.49
VEGFA-228ENST00000617771 SLC45A1Q9Y2W3 748 aa30.62■■■□□ 2.49
VEGFA-228ENST00000617771 GOLIM4O00461 696 aa30.61■■■□□ 2.49
VEGFA-228ENST00000617771 CCDC84Q86UT8 332 aaPredicted RBP30.61■■■□□ 2.49
VEGFA-228ENST00000617771 METTL16Q86W50 562 aaKnown RBP30.61■■■□□ 2.49
VEGFA-228ENST00000617771 SAP30BPQ9UHR5 308 aaKnown RBP30.61■■■□□ 2.49
VEGFA-228ENST00000617771 SLC9C2Q5TAH2 1124 aa30.6■■■□□ 2.49
VEGFA-228ENST00000617771 ADGRA2Q96PE1 1338 aa30.6■■■□□ 2.49
VEGFA-228ENST00000617771 CDK5RAP2Q96SN8 1893 aa30.6■■■□□ 2.49
VEGFA-228ENST00000617771 PHIPQ8WWQ0 1821 aa30.59■■■□□ 2.49
VEGFA-228ENST00000617771 USP17L5A8MUK1 530 aa30.59■■■□□ 2.49
VEGFA-228ENST00000617771 GNRH1P01148 92 aa30.59■■■□□ 2.49
VEGFA-228ENST00000617771 ZNF280CQ8ND82 737 aa30.59■■■□□ 2.49
VEGFA-228ENST00000617771 AS3MTQ9HBK9 375 aa30.59■■■□□ 2.49
VEGFA-228ENST00000617771 PDE6AP16499 860 aa30.58■■■□□ 2.49
VEGFA-228ENST00000617771 ATP5JP18859 108 aa30.58■■■□□ 2.49
VEGFA-228ENST00000617771 RRP1BQ14684 758 aaKnown RBP30.58■■■□□ 2.49
VEGFA-228ENST00000617771 ARHGAP39Q9C0H5 1083 aa30.58■■■□□ 2.49
VEGFA-228ENST00000617771 SIPA1L1O43166 1804 aa30.57■■■□□ 2.48
VEGFA-228ENST00000617771 MAGEB6P1A0A0J9YX57 407 aa30.57■■■□□ 2.48
VEGFA-228ENST00000617771 ASNSP08243 561 aa30.57■■■□□ 2.48
VEGFA-228ENST00000617771 CYP2C8P10632 490 aa30.57■■■□□ 2.48
VEGFA-228ENST00000617771 SPP2Q13103 211 aa30.57■■■□□ 2.48
VEGFA-228ENST00000617771 RIOK1Q9BRS2 568 aaKnown RBP30.57■■■□□ 2.48
VEGFA-228ENST00000617771 BOLA2Q9H3K6 86 aa30.57■■■□□ 2.48
VEGFA-228ENST00000617771 DNAJC18Q9H819 358 aa30.57■■■□□ 2.48
VEGFA-228ENST00000617771 GINM1Q9NU53 330 aa30.57■■■□□ 2.48
VEGFA-228ENST00000617771 AGTPBP1Q9UPW5 1226 aa30.57■■■□□ 2.48
VEGFA-228ENST00000617771 PROCA1Q8NCQ7 364 aaPredicted RBP30.56■■■□□ 2.48
VEGFA-228ENST00000617771 ARMC5Q96C12 935 aa30.56■■■□□ 2.48
VEGFA-228ENST00000617771 PAG1Q9NWQ8 432 aa30.56■■■□□ 2.48
VEGFA-228ENST00000617771 ATAD5Q96QE3 1844 aa30.55■■■□□ 2.48
VEGFA-228ENST00000617771 PRMT2P55345 433 aa30.55■■■□□ 2.48
VEGFA-228ENST00000617771 PTCH2Q9Y6C5 1203 aa30.55■■■□□ 2.48
VEGFA-228ENST00000617771 PTPRFP10586 1907 aa30.55■■■□□ 2.48
VEGFA-228ENST00000617771 ZNF532Q9HCE3 1301 aa30.54■■■□□ 2.48
VEGFA-228ENST00000617771 BCRP11274 1271 aa30.54■■■□□ 2.48
VEGFA-228ENST00000617771 SLC4A8Q2Y0W8 1093 aa30.54■■■□□ 2.48
VEGFA-228ENST00000617771 HAUS7Q99871 368 aa30.54■■■□□ 2.48
VEGFA-228ENST00000617771 PNMA3Q9UL41 463 aa30.54■■■□□ 2.48
VEGFA-228ENST00000617771 SMARCA5O60264 1052 aaPredicted RBP30.53■■■□□ 2.48
VEGFA-228ENST00000617771 PSMC4P43686 418 aa30.53■■■□□ 2.48
VEGFA-228ENST00000617771 RRP1P56182 461 aaKnown RBP30.53■■■□□ 2.48
VEGFA-228ENST00000617771 SLC9C1Q4G0N8 1177 aa30.53■■■□□ 2.48
VEGFA-228ENST00000617771 NBPF11Q86T75 865 aa30.53■■■□□ 2.48
VEGFA-228ENST00000617771 TTC6Q86TZ1 520 aa30.53■■■□□ 2.48
VEGFA-228ENST00000617771 SMCR8Q8TEV9 937 aaPredicted RBP30.53■■■□□ 2.48
VEGFA-228ENST00000617771 EDC3Q96F86 508 aaKnown RBP30.53■■■□□ 2.48
VEGFA-228ENST00000617771 CRNKL1Q9BZJ0 848 aaKnown RBP30.53■■■□□ 2.48
VEGFA-228ENST00000617771 DCTPP1Q9H773 170 aa30.53■■■□□ 2.48
VEGFA-228ENST00000617771 HOXD10P28358 340 aa30.52■■■□□ 2.48
VEGFA-228ENST00000617771 PABPC4Q13310 644 aaKnown RBP eCLIP30.52■■■□□ 2.486e-13■■■■■ 112.3
VEGFA-228ENST00000617771 WDR18Q9BV38 432 aa30.52■■■□□ 2.48
VEGFA-228ENST00000617771 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.52■■■□□ 2.481e-12■■■□□ 17.3
VEGFA-228ENST00000617771 EHD4Q9H223 541 aa30.52■■■□□ 2.48
VEGFA-228ENST00000617771 SERPINB13Q9UIV8 391 aa30.52■■■□□ 2.48
VEGFA-228ENST00000617771 TCRBV5S4A2TA0A5A2 114 aa30.51■■■□□ 2.47
VEGFA-228ENST00000617771 ECM2O94769 699 aaPredicted RBP30.51■■■□□ 2.47
VEGFA-228ENST00000617771 GDF11O95390 407 aa30.51■■■□□ 2.47
VEGFA-228ENST00000617771 FMNL1O95466 1100 aaPredicted RBP30.51■■■□□ 2.47
VEGFA-228ENST00000617771 HMGCS2P54868 508 aa30.51■■■□□ 2.47
VEGFA-228ENST00000617771 SH3D19Q5HYK7 790 aa30.51■■■□□ 2.47
VEGFA-228ENST00000617771 TREML2Q5T2D2 321 aa30.51■■■□□ 2.47
VEGFA-228ENST00000617771 TRIM47Q96LD4 638 aa30.51■■■□□ 2.47
VEGFA-228ENST00000617771 HTTP42858 3142 aa30.5■■■□□ 2.47
VEGFA-228ENST00000617771 MYH1P12882 1939 aa30.5■■■□□ 2.47
VEGFA-228ENST00000617771 ZBTB21Q9ULJ3 1066 aa30.5■■■□□ 2.47
VEGFA-228ENST00000617771 ZSWIM8A7E2V4 1837 aa30.5■■■□□ 2.47
VEGFA-228ENST00000617771 YTHDC1Q96MU7 727 aaKnown RBP30.49■■■□□ 2.47
VEGFA-228ENST00000617771 SRRDQ9UH36 339 aa30.49■■■□□ 2.47
VEGFA-228ENST00000617771 POLR3DP05423 398 aaPredicted RBP30.48■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms