RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 IFNAR1P17181 557 aa13.56□□□□□ -0.24
C11orf54-215ENST00000617482 NR5A1Q13285 461 aa13.56□□□□□ -0.24
C11orf54-215ENST00000617482 SAFBQ15424 915 aaKnown RBP eCLIP13.56□□□□□ -0.24
C11orf54-215ENST00000617482 SUSD4Q5VX71 490 aa13.56□□□□□ -0.24
C11orf54-215ENST00000617482 LRRN4CLQ8ND94 238 aa13.56□□□□□ -0.24
C11orf54-215ENST00000617482 NUP133Q8WUM0 1156 aa13.56□□□□□ -0.24
C11orf54-215ENST00000617482 UTP14AQ9BVJ6 771 aaKnown RBP13.56□□□□□ -0.24
C11orf54-215ENST00000617482 KRT23Q9C075 422 aa13.56□□□□□ -0.24
C11orf54-215ENST00000617482 CNNM2Q9H8M5 875 aa13.56□□□□□ -0.24
C11orf54-215ENST00000617482 MYO5AQ9Y4I1 1855 aaKnown RBP13.56□□□□□ -0.24
C11orf54-215ENST00000617482 ABCA3Q99758 1704 aa13.55□□□□□ -0.24
C11orf54-215ENST00000617482 WTAPQ15007 396 aa13.55□□□□□ -0.24
C11orf54-215ENST00000617482 RTN1Q16799 776 aa13.55□□□□□ -0.24
C11orf54-215ENST00000617482 UTP14CQ5TAP6 766 aaKnown RBP13.55□□□□□ -0.24
C11orf54-215ENST00000617482 FBXO38Q6PIJ6 1188 aa13.55□□□□□ -0.24
C11orf54-215ENST00000617482 TRIM22Q8IYM9 498 aa13.55□□□□□ -0.24
C11orf54-215ENST00000617482 ZNF34Q8IZ26 560 aa13.55□□□□□ -0.24
C11orf54-215ENST00000617482 ZNF397Q8NF99 534 aaPredicted RBP13.55□□□□□ -0.24
C11orf54-215ENST00000617482 IQSEC3Q9UPP2 1182 aaPredicted RBP13.55□□□□□ -0.24
C11orf54-215ENST00000617482 MYH7P12883 1935 aa13.55□□□□□ -0.24
C11orf54-215ENST00000617482 CBFA2T2O43439 604 aa13.55□□□□□ -0.24
C11orf54-215ENST00000617482 TOP1P11387 765 aaKnown RBP13.55□□□□□ -0.24
C11orf54-215ENST00000617482 MDM2Q00987 491 aaPredicted RBP13.55□□□□□ -0.24
C11orf54-215ENST00000617482 ERCC6LQ2NKX8 1250 aa13.55□□□□□ -0.24
C11orf54-215ENST00000617482 GRAMD1CQ8IYS0 662 aa13.55□□□□□ -0.24
C11orf54-215ENST00000617482 PDILTQ8N807 584 aa13.55□□□□□ -0.24
C11orf54-215ENST00000617482 WASF1Q92558 559 aa13.55□□□□□ -0.24
C11orf54-215ENST00000617482 DNAI1Q9UI46 699 aa13.55□□□□□ -0.24
C11orf54-215ENST00000617482 PCDHB6Q9Y5E3 794 aa13.55□□□□□ -0.24
C11orf54-215ENST00000617482 ERVV-1B6SEH8 477 aa13.54□□□□□ -0.24
C11orf54-215ENST00000617482 SART3Q15020 963 aaKnown RBP13.54□□□□□ -0.24
C11orf54-215ENST00000617482 ZNF827Q17R98 1081 aa13.54□□□□□ -0.24
C11orf54-215ENST00000617482 VSTM4Q8IW00 320 aa13.54□□□□□ -0.24
C11orf54-215ENST00000617482 GTPBP4Q9BZE4 634 aaKnown RBP13.54□□□□□ -0.24
C11orf54-215ENST00000617482 NACAP1Q9BZK3 213 aa13.54□□□□□ -0.24
C11orf54-215ENST00000617482 LRP2BPQ9P2M1 347 aa13.54□□□□□ -0.24
C11orf54-215ENST00000617482 SERTAD1Q9UHV2 236 aa13.54□□□□□ -0.24
C11orf54-215ENST00000617482 DDX60Q8IY21 1712 aaKnown RBP13.54□□□□□ -0.24
C11orf54-215ENST00000617482 STK36Q9NRP7 1315 aa13.54□□□□□ -0.24
C11orf54-215ENST00000617482 ERICH2A1L162 156 aa13.54□□□□□ -0.24
C11orf54-215ENST00000617482 PRR29P0C7W0 189 aa13.54□□□□□ -0.24
C11orf54-215ENST00000617482 CRACR2BQ8N4Y2 399 aaPredicted RBP13.54□□□□□ -0.24
C11orf54-215ENST00000617482 OXER1Q8TDS5 423 aa13.54□□□□□ -0.24
C11orf54-215ENST00000617482 L2HGDHQ9H9P8 463 aa13.54□□□□□ -0.24
C11orf54-215ENST00000617482 INTS13Q9NVM9 706 aa13.54□□□□□ -0.24
C11orf54-215ENST00000617482 FBXO2Q9UK22 296 aaPredicted RBP13.54□□□□□ -0.24
C11orf54-215ENST00000617482 MAN1B1Q9UKM7 699 aa13.54□□□□□ -0.24
C11orf54-215ENST00000617482 MINDY4BA8MYZ0 360 aa13.53□□□□□ -0.24
C11orf54-215ENST00000617482 SMIM22K7EJ46 135 aa13.53□□□□□ -0.24
C11orf54-215ENST00000617482 IL6STP40189 918 aaPredicted RBP13.53□□□□□ -0.24
C11orf54-215ENST00000617482 KCNJ6P48051 423 aa13.53□□□□□ -0.24
C11orf54-215ENST00000617482 ETF1P62495 437 aaKnown RBP13.53□□□□□ -0.24
C11orf54-215ENST00000617482 DHX8Q14562 1220 aaKnown RBP13.53□□□□□ -0.24
C11orf54-215ENST00000617482 POSTNQ15063 836 aa13.53□□□□□ -0.24
C11orf54-215ENST00000617482 STAG1Q8WVM7 1258 aa13.53□□□□□ -0.24
C11orf54-215ENST00000617482 CABP5Q9NP86 173 aa13.53□□□□□ -0.24
C11orf54-215ENST00000617482 BCL9O00512 1426 aa13.53□□□□□ -0.24
C11orf54-215ENST00000617482 CDK11BP21127 795 aaKnown RBP13.53□□□□□ -0.24
C11orf54-215ENST00000617482 PTPREP23469 700 aa13.53□□□□□ -0.24
C11orf54-215ENST00000617482 FMR1Q06787 632 aaKnown RBP eCLIP13.53□□□□□ -0.24
C11orf54-215ENST00000617482 CCDC93Q567U6 631 aa13.53□□□□□ -0.24
C11orf54-215ENST00000617482 USP49Q70CQ1 688 aa13.53□□□□□ -0.24
C11orf54-215ENST00000617482 TRMT44Q8IYL2 757 aaKnown RBP13.53□□□□□ -0.24
C11orf54-215ENST00000617482 FAM177A1Q8N128 213 aaPredicted RBP13.53□□□□□ -0.24
C11orf54-215ENST00000617482 FANCBQ8NB91 859 aa13.53□□□□□ -0.24
C11orf54-215ENST00000617482 SDR42E1Q8WUS8 393 aa13.53□□□□□ -0.24
C11orf54-215ENST00000617482 TMX1Q9H3N1 280 aa13.53□□□□□ -0.24
C11orf54-215ENST00000617482 HOOK1Q9UJC3 728 aaKnown RBP13.53□□□□□ -0.24
C11orf54-215ENST00000617482 MORC2Q9Y6X9 1032 aaPredicted RBP13.53□□□□□ -0.24
C11orf54-215ENST00000617482 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.53□□□□□ -0.24
C11orf54-215ENST00000617482 FOXP1Q9H334 677 aaPredicted RBP13.52□□□□□ -0.24
C11orf54-215ENST00000617482 NFE2L3Q9Y4A8 694 aa13.52□□□□□ -0.24
C11orf54-215ENST00000617482 hCG_1642624A0A1W2PR95 340 aa13.52□□□□□ -0.25
C11orf54-215ENST00000617482 EXOC5O00471 708 aa13.52□□□□□ -0.25
C11orf54-215ENST00000617482 DEXIO95424 95 aa13.52□□□□□ -0.25
C11orf54-215ENST00000617482 RILPL1Q5EBL4 403 aa13.52□□□□□ -0.25
C11orf54-215ENST00000617482 ZNF654Q8IZM8 581 aa13.52□□□□□ -0.25
C11orf54-215ENST00000617482 UBAC1Q9BSL1 405 aa13.52□□□□□ -0.25
C11orf54-215ENST00000617482 ABCF2Q9UG63 623 aa13.52□□□□□ -0.25
C11orf54-215ENST00000617482 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.52□□□□□ -0.25
C11orf54-215ENST00000617482 STRCQ7RTU9 1775 aa13.51□□□□□ -0.25
C11orf54-215ENST00000617482 GNAT2P19087 354 aa13.51□□□□□ -0.25
C11orf54-215ENST00000617482 CYP7A1P22680 504 aa13.51□□□□□ -0.25
C11orf54-215ENST00000617482 TRIM65Q6PJ69 517 aa13.51□□□□□ -0.25
C11orf54-215ENST00000617482 ADGRA1Q86SQ6 560 aa13.51□□□□□ -0.25
C11orf54-215ENST00000617482 SMARCE1Q969G3 411 aa13.51□□□□□ -0.25
C11orf54-215ENST00000617482 ITGB4P16144 1822 aa13.51□□□□□ -0.25
C11orf54-215ENST00000617482 CCDC196A0A1B0GTZ2 297 aa13.51□□□□□ -0.25
C11orf54-215ENST00000617482 WTIPA6NIX2 430 aaPredicted RBP13.51□□□□□ -0.25
C11orf54-215ENST00000617482 FANCGO15287 622 aa13.51□□□□□ -0.25
C11orf54-215ENST00000617482 ADKP55263 362 aaKnown RBP13.51□□□□□ -0.25
C11orf54-215ENST00000617482 PPARAQ07869 468 aa13.51□□□□□ -0.25
C11orf54-215ENST00000617482 REXO1L1PQ8IX06 675 aa13.51□□□□□ -0.25
C11orf54-215ENST00000617482 CSRNP2Q9H175 543 aa13.51□□□□□ -0.25
C11orf54-215ENST00000617482 ZNF446Q9NWS9 450 aa13.51□□□□□ -0.25
C11orf54-215ENST00000617482 FAM205CA6NFA0 338 aa13.5□□□□□ -0.25
C11orf54-215ENST00000617482 CCP110O43303 1012 aa13.5□□□□□ -0.25
C11orf54-215ENST00000617482 URI1O94763 535 aaPredicted RBP13.5□□□□□ -0.25
C11orf54-215ENST00000617482 IGHMBP2P38935 993 aaKnown RBP13.5□□□□□ -0.25
C11orf54-215ENST00000617482 TMTC2Q8N394 836 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms