RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 MINDY4BA8MYZ0 360 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 POLR2BP30876 1174 aaKnown RBP3.81□□□□□ -1.8
LPP-220ENST00000617246 BCCIPQ9P287 314 aaKnown RBP eCLIP3.81□□□□□ -1.8
LPP-220ENST00000617246 STX8Q9UNK0 236 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 XDHP47989 1333 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 CCDC172P0C7W6 258 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 TWISTNBQ3B726 338 aaPredicted RBP3.81□□□□□ -1.8
LPP-220ENST00000617246 ARHGAP15Q53QZ3 475 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 NCAPGQ9BPX3 1015 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 LIG1P18858 919 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 LMAN1P49257 510 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 VEPH1Q14D04 833 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 MCMDC2Q4G0Z9 681 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 NCDNQ9UBB6 729 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 ITGB4P16144 1822 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 INHBEP58166 350 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 TMCO3Q6UWJ1 677 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 SIL1Q9H173 461 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 POLR3EQ9NVU0 708 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 GMEB2Q9UKD1 530 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 TMEM88BA6NKF7 163 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 TOMM70O94826 608 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 GPTP24298 496 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 MARCKSP29966 332 aaPredicted RBP3.81□□□□□ -1.8
LPP-220ENST00000617246 LETM2Q2VYF4 491 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 SLITRK6Q9H5Y7 841 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 CPSF1Q10570 1443 aaKnown RBP3.81□□□□□ -1.8
LPP-220ENST00000617246 SHTN1A0MZ66 631 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 FERP16591 822 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 ZBTB8OSQ8IWT0 167 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 GLT1D1Q96MS3 346 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 SPINK5Q9NQ38 1064 aaPredicted RBP3.81□□□□□ -1.8
LPP-220ENST00000617246 TRPC6Q9Y210 931 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 MAN1A1P33908 653 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 NUCB1Q02818 461 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 COLEC12Q5KU26 742 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 FBXO31Q5XUX0 539 aaPredicted RBP3.81□□□□□ -1.8
LPP-220ENST00000617246 CLUAP1Q96AJ1 413 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 SYNCQ9H7C4 482 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 CCDC194A0A1B0GVG4 234 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 MAP3K13O43283 966 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 HOXA2O43364 376 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 FKTNO75072 461 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 GNRH1P01148 92 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 GNAI2P04899 355 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 C12orf50Q8NA57 414 aaPredicted RBP3.81□□□□□ -1.8
LPP-220ENST00000617246 MKRN1Q9UHC7 482 aaKnown RBP3.81□□□□□ -1.8
LPP-220ENST00000617246 GOLGA6CA6NDK9 693 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 GOLGA6BA6NDN3 693 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 GOLGA6DP0CG33 693 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 SETSIPP0DME0 302 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 PSMC4P43686 418 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 AK2P54819 239 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 CC2D1AQ6P1N0 951 aaPredicted RBP3.81□□□□□ -1.8
LPP-220ENST00000617246 CEP112Q8N8E3 955 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 CHURC1Q8WUH1 139 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 OXCT2Q9BYC2 517 aaPredicted RBP3.81□□□□□ -1.8
LPP-220ENST00000617246 INO80BQ9C086 356 aaPredicted RBP3.81□□□□□ -1.8
LPP-220ENST00000617246 EFCC1Q9HA90 598 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 GOLGA6AQ9NYA3 693 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 RAG1P15918 1043 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 BIRC3Q13489 604 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 HOMER1Q86YM7 354 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 CEP57L1Q8IYX8 460 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 NDC80O14777 642 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 KRT17Q04695 432 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 SHCBP1Q8NEM2 672 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 PPM1EQ8WY54 764 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 PRIMPOLQ96LW4 560 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 GBP4Q96PP9 640 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 MYH10P35580 1976 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 SLIT3O75094 1523 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 PDIA4P13667 645 aaKnown RBP3.81□□□□□ -1.8
LPP-220ENST00000617246 HAUS3Q68CZ6 603 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 NUDT12Q9BQG2 462 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 PI4K2BG5E9Z4 385 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 RPS12P25398 132 aaKnown RBP3.81□□□□□ -1.8
LPP-220ENST00000617246 PSMD2Q13200 908 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 BFSP2Q13515 415 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 CCDC73Q6ZRK6 1079 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 SND1Q7KZF4 910 aaKnown RBP eCLIP3.81□□□□□ -1.8
LPP-220ENST00000617246 VPS36Q86VN1 386 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 PI4K2BQ8TCG2 481 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 KIF9Q9HAQ2 790 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 CCPG1Q9ULG6 757 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 KRT32Q14532 448 aa3.81□□□□□ -1.8
LPP-220ENST00000617246 TMEM57Q8N5G2 664 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 PLVAPQ9BX97 442 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 EXOC7Q9UPT5 735 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 PCDHB13Q9Y5F0 798 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 RGPD2P0DJD1 1756 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 RARBP10826 455 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 DEKP35659 375 aaKnown RBP3.8□□□□□ -1.8
LPP-220ENST00000617246 YWHAEP62258 255 aaKnown RBP3.8□□□□□ -1.8
LPP-220ENST00000617246 AMPD3Q01432 767 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 PEX6Q13608 980 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 GLMNQ92990 594 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 PPP1R9BQ96SB3 815 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 KIAA0232Q92628 1395 aa3.8□□□□□ -1.8
LPP-220ENST00000617246 SCN7AQ01118 1682 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms