RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 MCAMP43121 646 aa21.95■■□□□ 1.1
SMN2-213ENST00000614240 TTC39AQ5SRH9 613 aa21.95■■□□□ 1.1
SMN2-213ENST00000614240 UNC93B1Q9H1C4 597 aa21.95■■□□□ 1.1
SMN2-213ENST00000614240 ELNP15502 786 aa21.94■■□□□ 1.1
SMN2-213ENST00000614240 FXR1P51114 621 aaKnown RBP eCLIP21.94■■□□□ 1.1
SMN2-213ENST00000614240 CCDC158Q5M9N0 1113 aa21.94■■□□□ 1.1
SMN2-213ENST00000614240 TREML2Q5T2D2 321 aa21.94■■□□□ 1.1
SMN2-213ENST00000614240 PROCA1Q8NCQ7 364 aaPredicted RBP21.94■■□□□ 1.1
SMN2-213ENST00000614240 ZNF280CQ8ND82 737 aa21.94■■□□□ 1.1
SMN2-213ENST00000614240 U2AF1L4Q8WU68 220 aaKnown RBP21.94■■□□□ 1.1
SMN2-213ENST00000614240 SNRKQ9NRH2 765 aa21.94■■□□□ 1.1
SMN2-213ENST00000614240 USP17L5A8MUK1 530 aa21.93■■□□□ 1.1
SMN2-213ENST00000614240 BAG3O95817 575 aa21.93■■□□□ 1.1
SMN2-213ENST00000614240 CAP2P40123 477 aa21.93■■□□□ 1.1
SMN2-213ENST00000614240 PABPC4Q13310 644 aaKnown RBP eCLIP21.93■■□□□ 1.1
SMN2-213ENST00000614240 DOCK1Q14185 1865 aa21.93■■□□□ 1.1
SMN2-213ENST00000614240 ZKSCAN2Q63HK3 967 aa21.93■■□□□ 1.1
SMN2-213ENST00000614240 NAA16Q6N069 864 aaPredicted RBP21.93■■□□□ 1.1
SMN2-213ENST00000614240 PXYLP1Q8TE99 480 aa21.93■■□□□ 1.1
SMN2-213ENST00000614240 SH3RF3Q8TEJ3 882 aaPredicted RBP21.93■■□□□ 1.1
SMN2-213ENST00000614240 TBC1D2Q9BYX2 928 aa21.93■■□□□ 1.1
SMN2-213ENST00000614240 FARP2O94887 1054 aaPredicted RBP21.92■■□□□ 1.1
SMN2-213ENST00000614240 TFRCP02786 760 aaKnown RBP21.92■■□□□ 1.1
SMN2-213ENST00000614240 INHAP05111 366 aa21.92■■□□□ 1.1
SMN2-213ENST00000614240 PLCG2P16885 1265 aa21.92■■□□□ 1.1
SMN2-213ENST00000614240 HMGCS2P54868 508 aa21.92■■□□□ 1.1
SMN2-213ENST00000614240 IRF5Q13568 498 aa21.92■■□□□ 1.1
SMN2-213ENST00000614240 CHRDL2Q6WN34 429 aa21.92■■□□□ 1.1
SMN2-213ENST00000614240 TRIM34Q9BYJ4 488 aa21.92■■□□□ 1.1
SMN2-213ENST00000614240 AS3MTQ9HBK9 375 aa21.92■■□□□ 1.1
SMN2-213ENST00000614240 AATFQ9NY61 560 aaKnown RBP eCLIP21.92■■□□□ 1.1
SMN2-213ENST00000614240 PI4KBQ9UBF8 816 aa21.92■■□□□ 1.1
SMN2-213ENST00000614240 HERC5Q9UII4 1024 aaKnown RBP21.92■■□□□ 1.1
SMN2-213ENST00000614240 SGPL1O95470 568 aa21.91■■□□□ 1.1
SMN2-213ENST00000614240 FAM110CQ1W6H9 321 aa21.91■■□□□ 1.1
SMN2-213ENST00000614240 TMEM57Q8N5G2 664 aa21.91■■□□□ 1.1
SMN2-213ENST00000614240 DHX36Q9H2U1 1008 aaKnown RBP21.91■■□□□ 1.1
SMN2-213ENST00000614240 NR2E3Q9Y5X4 410 aa21.91■■□□□ 1.1
SMN2-213ENST00000614240 COL2A1P02458 1487 aaPredicted RBP21.9■■□□□ 1.1
SMN2-213ENST00000614240 GCLCP48506 637 aaPredicted RBP21.9■■□□□ 1.1
SMN2-213ENST00000614240 TNNI3KQ59H18 835 aa21.9■■□□□ 1.1
SMN2-213ENST00000614240 DBNDD2Q9BQY9 259 aa21.9■■□□□ 1.1
SMN2-213ENST00000614240 GPR108Q9NPR9 543 aa21.9■■□□□ 1.1
SMN2-213ENST00000614240 FPGT-TNNI3KV9GXZ4 949 aa21.9■■□□□ 1.1
SMN2-213ENST00000614240 CENPFP49454 3210 aa21.89■■□□□ 1.09
SMN2-213ENST00000614240 SURF6O75683 361 aaKnown RBP21.89■■□□□ 1.09
SMN2-213ENST00000614240 CRACR2BQ8N4Y2 399 aaPredicted RBP21.89■■□□□ 1.09
SMN2-213ENST00000614240 TGFBRAP1Q8WUH2 860 aa21.89■■□□□ 1.09
SMN2-213ENST00000614240 DEFB118Q96PH6 123 aa21.89■■□□□ 1.09
SMN2-213ENST00000614240 ATP8B2P98198 1209 aa21.88■■□□□ 1.09
SMN2-213ENST00000614240 POLA2Q14181 598 aa21.88■■□□□ 1.09
SMN2-213ENST00000614240 RRP1BQ14684 758 aaKnown RBP21.88■■□□□ 1.09
SMN2-213ENST00000614240 UBE2Q1Q7Z7E8 422 aa21.88■■□□□ 1.09
SMN2-213ENST00000614240 MAPKAPK5Q8IW41 473 aa21.88■■□□□ 1.09
SMN2-213ENST00000614240 ASCC2Q9H1I8 757 aaPredicted RBP21.88■■□□□ 1.09
SMN2-213ENST00000614240 TMOD4Q9NZQ9 345 aa21.88■■□□□ 1.09
SMN2-213ENST00000614240 MGAMO43451 1857 aa21.88■■□□□ 1.09
SMN2-213ENST00000614240 IRX3P78415 501 aaPredicted RBP21.87■■□□□ 1.09
SMN2-213ENST00000614240 FTSJ3Q8IY81 847 aaKnown RBP21.87■■□□□ 1.09
SMN2-213ENST00000614240 PHIPQ8WWQ0 1821 aa21.86■■□□□ 1.09
SMN2-213ENST00000614240 ASNSP08243 561 aa21.86■■□□□ 1.09
SMN2-213ENST00000614240 CAPN2P17655 700 aa21.86■■□□□ 1.09
SMN2-213ENST00000614240 MTMR2Q13614 643 aa21.86■■□□□ 1.09
SMN2-213ENST00000614240 SH3D19Q5HYK7 790 aa21.86■■□□□ 1.09
SMN2-213ENST00000614240 FOXP4Q8IVH2 680 aaPredicted RBP21.86■■□□□ 1.09
SMN2-213ENST00000614240 SSH3Q8TE77 659 aa21.86■■□□□ 1.09
SMN2-213ENST00000614240 C1orf115Q9H7X2 142 aa21.86■■□□□ 1.09
SMN2-213ENST00000614240 MKI67P46013 3256 aaKnown RBP21.86■■□□□ 1.09
SMN2-213ENST00000614240 CEP290O15078 2479 aa21.85■■□□□ 1.09
SMN2-213ENST00000614240 PTPRFP10586 1907 aa21.85■■□□□ 1.09
SMN2-213ENST00000614240 EVI5O60447 810 aa21.85■■□□□ 1.09
SMN2-213ENST00000614240 CYP2E1P05181 493 aaPredicted RBP21.85■■□□□ 1.09
SMN2-213ENST00000614240 PPP4CP60510 307 aa21.85■■□□□ 1.09
SMN2-213ENST00000614240 ITPRIPQ8IWB1 547 aa21.85■■□□□ 1.09
SMN2-213ENST00000614240 WDR18Q9BV38 432 aa21.85■■□□□ 1.09
SMN2-213ENST00000614240 RBM27Q9P2N5 1060 aaKnown RBP21.85■■□□□ 1.09
SMN2-213ENST00000614240 PALD1Q9ULE6 856 aa21.85■■□□□ 1.09
SMN2-213ENST00000614240 FLT1P17948 1338 aa21.84■■□□□ 1.09
SMN2-213ENST00000614240 HLA-DOAP06340 250 aa21.84■■□□□ 1.09
SMN2-213ENST00000614240 ZAP70P43403 619 aa21.84■■□□□ 1.09
SMN2-213ENST00000614240 BACE1P56817 501 aa21.84■■□□□ 1.09
SMN2-213ENST00000614240 ADGRA1Q86SQ6 560 aa21.84■■□□□ 1.09
SMN2-213ENST00000614240 SAP30BPQ9UHR5 308 aaKnown RBP21.84■■□□□ 1.09
SMN2-213ENST00000614240 HMGCRP04035 888 aa21.83■■□□□ 1.09
SMN2-213ENST00000614240 CYP7A1P22680 504 aa21.83■■□□□ 1.09
SMN2-213ENST00000614240 ZNF512BQ96KM6 892 aaPredicted RBP21.83■■□□□ 1.09
SMN2-213ENST00000614240 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.83■■□□□ 1.09
SMN2-213ENST00000614240 PIH1D3Q9NQM4 214 aaKnown RBP21.83■■□□□ 1.09
SMN2-213ENST00000614240 PAK6Q9NQU5 681 aaPredicted RBP21.83■■□□□ 1.09
SMN2-213ENST00000614240 C19orf81C9J6K1 198 aa21.82■■□□□ 1.08
SMN2-213ENST00000614240 USP17L10C9JJH3 530 aa21.82■■□□□ 1.08
SMN2-213ENST00000614240 ZBTB7BO15156 539 aaPredicted RBP21.82■■□□□ 1.08
SMN2-213ENST00000614240 IGSF3O75054 1194 aa21.82■■□□□ 1.08
SMN2-213ENST00000614240 GDF11O95390 407 aa21.82■■□□□ 1.08
SMN2-213ENST00000614240 CCDC8Q9H0W5 538 aaPredicted RBP21.82■■□□□ 1.08
SMN2-213ENST00000614240 IDH1O75874 414 aaKnown RBP21.81■■□□□ 1.08
SMN2-213ENST00000614240 CCAR1Q8IX12 1150 aaKnown RBP21.81■■□□□ 1.08
SMN2-213ENST00000614240 P2RX7Q99572 595 aaKnown RBP21.81■■□□□ 1.08
SMN2-213ENST00000614240 GINM1Q9NU53 330 aa21.81■■□□□ 1.08
SMN2-213ENST00000614240 DBNLQ9UJU6 430 aaKnown RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms