RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 PRC1O43663 620 aa11.57□□□□□ -0.56
GGA3-221ENST00000614198 GJB2P29033 226 aa11.57□□□□□ -0.56
GGA3-221ENST00000614198 ALDH1B1P30837 517 aa11.57□□□□□ -0.56
GGA3-221ENST00000614198 DHX32Q7L7V1 743 aaKnown RBP11.57□□□□□ -0.56
GGA3-221ENST00000614198 ZNF592Q92610 1267 aa11.57□□□□□ -0.56
GGA3-221ENST00000614198 KCNF1Q9H3M0 494 aa11.57□□□□□ -0.56
GGA3-221ENST00000614198 GADD45BO75293 160 aaPredicted RBP11.57□□□□□ -0.56
GGA3-221ENST00000614198 DYNLL2Q96FJ2 89 aa11.57□□□□□ -0.56
GGA3-221ENST00000614198 ZNF277Q9NRM2 450 aaPredicted RBP11.57□□□□□ -0.56
GGA3-221ENST00000614198 ZSWIM5Q9P217 1185 aa11.57□□□□□ -0.56
GGA3-221ENST00000614198 LTBP1Q14766 1721 aa11.57□□□□□ -0.56
GGA3-221ENST00000614198 SCN9AQ15858 1988 aa11.57□□□□□ -0.56
GGA3-221ENST00000614198 LRRFIP1Q32MZ4 808 aaKnown RBP11.57□□□□□ -0.56
GGA3-221ENST00000614198 FERMT3Q86UX7 667 aa11.57□□□□□ -0.56
GGA3-221ENST00000614198 MAPKAPK5Q8IW41 473 aa11.57□□□□□ -0.56
GGA3-221ENST00000614198 MB21D2Q8IYB1 491 aaPredicted RBP11.57□□□□□ -0.56
GGA3-221ENST00000614198 SLC44A5Q8NCS7 719 aa11.57□□□□□ -0.56
GGA3-221ENST00000614198 TGFBRAP1Q8WUH2 860 aa11.57□□□□□ -0.56
GGA3-221ENST00000614198 EPB41L2O43491 1005 aaKnown RBP11.56□□□□□ -0.56
GGA3-221ENST00000614198 CCDC183Q5T5S1 534 aa11.56□□□□□ -0.56
GGA3-221ENST00000614198 KIAA0825Q8IV33 1275 aa11.56□□□□□ -0.56
GGA3-221ENST00000614198 UPF1Q92900 1129 aaKnown RBP eCLIP11.56□□□□□ -0.563e-6■■□□□ 13.9
GGA3-221ENST00000614198 MYH2Q9UKX2 1941 aa11.56□□□□□ -0.56
GGA3-221ENST00000614198 IL1R1P14778 569 aa11.56□□□□□ -0.56
GGA3-221ENST00000614198 FAM47AQ5JRC9 791 aa11.56□□□□□ -0.56
GGA3-221ENST00000614198 CTR9Q6PD62 1173 aa11.56□□□□□ -0.56
GGA3-221ENST00000614198 CCDC82Q8N4S0 544 aa11.56□□□□□ -0.56
GGA3-221ENST00000614198 C7orf43Q8WVR3 580 aa11.56□□□□□ -0.56
GGA3-221ENST00000614198 G3V3G9 751 aa11.56□□□□□ -0.56
GGA3-221ENST00000614198 TULP2O00295 520 aa11.56□□□□□ -0.56
GGA3-221ENST00000614198 CTDNEP1O95476 244 aa11.56□□□□□ -0.56
GGA3-221ENST00000614198 MCM2P49736 904 aa11.56□□□□□ -0.56
GGA3-221ENST00000614198 IRX3P78415 501 aaPredicted RBP11.56□□□□□ -0.56
GGA3-221ENST00000614198 DCAF8Q5TAQ9 597 aa11.56□□□□□ -0.56
GGA3-221ENST00000614198 RGPD3A6NKT7 1758 aaPredicted RBP11.55□□□□□ -0.56
GGA3-221ENST00000614198 RGPD4Q7Z3J3 1758 aa11.55□□□□□ -0.56
GGA3-221ENST00000614198 FAM193AP78312 1265 aa11.55□□□□□ -0.56
GGA3-221ENST00000614198 GUCY1B3Q02153 619 aa11.55□□□□□ -0.56
GGA3-221ENST00000614198 PICALMQ13492 652 aa11.55□□□□□ -0.56
GGA3-221ENST00000614198 DCP1AQ9NPI6 582 aaPredicted RBP11.55□□□□□ -0.56
GGA3-221ENST00000614198 SYT1P21579 422 aa11.55□□□□□ -0.56
GGA3-221ENST00000614198 PLCD1P51178 756 aa11.55□□□□□ -0.56
GGA3-221ENST00000614198 PPARAQ07869 468 aa11.55□□□□□ -0.56
GGA3-221ENST00000614198 OTUD7BQ6GQQ9 843 aa11.55□□□□□ -0.56
GGA3-221ENST00000614198 USP48Q86UV5 1035 aa11.55□□□□□ -0.56
GGA3-221ENST00000614198 KIF18AQ8NI77 898 aa11.55□□□□□ -0.56
GGA3-221ENST00000614198 MCM9Q9NXL9 1143 aa11.55□□□□□ -0.56
GGA3-221ENST00000614198 TCHHQ07283 1943 aa11.54□□□□□ -0.56
GGA3-221ENST00000614198 SMTNL1A8MU46 457 aa11.54□□□□□ -0.56
GGA3-221ENST00000614198 BTDP43251 543 aa11.54□□□□□ -0.56
GGA3-221ENST00000614198 RALYLQ86SE5 291 aaKnown RBP11.54□□□□□ -0.56
GGA3-221ENST00000614198 INTS4Q96HW7 963 aaKnown RBP11.54□□□□□ -0.56
GGA3-221ENST00000614198 CALCOCO1Q9P1Z2 691 aa11.54□□□□□ -0.56
GGA3-221ENST00000614198 SMC3Q9UQE7 1217 aa11.54□□□□□ -0.56
GGA3-221ENST00000614198 BAZ2BQ9UIF8 2168 aaKnown RBP11.54□□□□□ -0.56
GGA3-221ENST00000614198 YDJCA8MPS7 323 aa11.54□□□□□ -0.56
GGA3-221ENST00000614198 PDIA3P30101 505 aaKnown RBP11.54□□□□□ -0.56
GGA3-221ENST00000614198 KRT32Q14532 448 aa11.54□□□□□ -0.56
GGA3-221ENST00000614198 RASGRP2Q7LDG7 609 aa11.54□□□□□ -0.56
GGA3-221ENST00000614198 TMEM87AQ8NBN3 555 aa11.54□□□□□ -0.56
GGA3-221ENST00000614198 NLGN2Q8NFZ4 835 aa11.54□□□□□ -0.56
GGA3-221ENST00000614198 NCOA7Q8NI08 942 aa11.54□□□□□ -0.56
GGA3-221ENST00000614198 MTMR7Q9Y216 660 aa11.54□□□□□ -0.56
GGA3-221ENST00000614198 ZBTB12Q9Y330 459 aaPredicted RBP11.54□□□□□ -0.56
GGA3-221ENST00000614198 LRRC37AA6NMS7 1700 aa11.54□□□□□ -0.56
GGA3-221ENST00000614198 KLF18A0A0U1RQI7 1052 aa11.54□□□□□ -0.56
GGA3-221ENST00000614198 VPS37CA5D8V6 355 aaPredicted RBP11.54□□□□□ -0.56
GGA3-221ENST00000614198 GOLGA6L6A8MZA4 724 aa11.54□□□□□ -0.56
GGA3-221ENST00000614198 RAD17O75943 681 aa11.54□□□□□ -0.56
GGA3-221ENST00000614198 KRT222Q8N1A0 295 aa11.54□□□□□ -0.56
GGA3-221ENST00000614198 RTFDC1Q9BY42 306 aaPredicted RBP11.54□□□□□ -0.56
GGA3-221ENST00000614198 TTF2Q9UNY4 1162 aaKnown RBP11.54□□□□□ -0.56
GGA3-221ENST00000614198 COL4A5P29400 1685 aa11.54□□□□□ -0.56
GGA3-221ENST00000614198 ECE2O60344 883 aa11.53□□□□□ -0.56
GGA3-221ENST00000614198 ADD1P35611 737 aaKnown RBP11.53□□□□□ -0.56
GGA3-221ENST00000614198 MICU3Q86XE3 530 aa11.53□□□□□ -0.56
GGA3-221ENST00000614198 WDR66Q8TBY9 1149 aa11.53□□□□□ -0.56
GGA3-221ENST00000614198 AIFM3Q96NN9 605 aa11.53□□□□□ -0.56
GGA3-221ENST00000614198 CCDC88AQ3V6T2 1871 aa11.53□□□□□ -0.56
GGA3-221ENST00000614198 SHTN1A0MZ66 631 aa11.53□□□□□ -0.56
GGA3-221ENST00000614198 SEMA3EO15041 775 aa11.53□□□□□ -0.56
GGA3-221ENST00000614198 RANBP6O60518 1105 aaKnown RBP11.53□□□□□ -0.56
GGA3-221ENST00000614198 GIMAP6Q6P9H5 292 aa11.53□□□□□ -0.56
GGA3-221ENST00000614198 MFSD6Q6ZSS7 791 aa11.53□□□□□ -0.56
GGA3-221ENST00000614198 CDC37L1Q7L3B6 337 aa11.53□□□□□ -0.56
GGA3-221ENST00000614198 ZFPM1Q8IX07 1006 aa11.53□□□□□ -0.56
GGA3-221ENST00000614198 HPS5Q9UPZ3 1129 aa11.53□□□□□ -0.56
GGA3-221ENST00000614198 hCG_1642624A0A1W2PR95 340 aa11.53□□□□□ -0.56
GGA3-221ENST00000614198 AKNAD1Q5T1N1 836 aa11.53□□□□□ -0.56
GGA3-221ENST00000614198 CREBRFQ8IUR6 639 aa11.53□□□□□ -0.56
GGA3-221ENST00000614198 FAM196BA6NMK8 535 aa11.52□□□□□ -0.57
GGA3-221ENST00000614198 USP5P45974 858 aa11.52□□□□□ -0.57
GGA3-221ENST00000614198 SHROOM1Q2M3G4 852 aaPredicted RBP11.52□□□□□ -0.57
GGA3-221ENST00000614198 GTF3C6Q969F1 213 aa11.52□□□□□ -0.57
GGA3-221ENST00000614198 C16orf45Q96MC5 204 aaPredicted RBP11.52□□□□□ -0.57
GGA3-221ENST00000614198 FAM53CQ9NYF3 392 aa11.52□□□□□ -0.57
GGA3-221ENST00000614198 ERICH4A6NGS2 130 aa11.52□□□□□ -0.57
GGA3-221ENST00000614198 PPIP5K2O43314 1243 aa11.52□□□□□ -0.57
GGA3-221ENST00000614198 CDC27P30260 824 aa11.52□□□□□ -0.57
GGA3-221ENST00000614198 STYK1Q6J9G0 422 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms