RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 MAPKAPK5Q8IW41 473 aa22.15■■□□□ 1.14
VCX3A-203ENST00000612369 TBC1D2Q9BYX2 928 aa22.15■■□□□ 1.14
VCX3A-203ENST00000612369 NDUFB9Q9Y6M9 179 aa22.15■■□□□ 1.14
VCX3A-203ENST00000612369 SLURP2P0DP57 97 aa22.14■■□□□ 1.13
VCX3A-203ENST00000612369 MLLT1Q03111 559 aaPredicted RBP22.14■■□□□ 1.13
VCX3A-203ENST00000612369 METTL16Q86W50 562 aaKnown RBP22.14■■□□□ 1.13
VCX3A-203ENST00000612369 PTPN22Q9Y2R2 807 aa22.14■■□□□ 1.13
VCX3A-203ENST00000612369 FOCADQ5VW36 1801 aa22.14■■□□□ 1.13
VCX3A-203ENST00000612369 CAP2P40123 477 aa22.13■■□□□ 1.13
VCX3A-203ENST00000612369 DYNLL1P63167 89 aaKnown RBP22.13■■□□□ 1.13
VCX3A-203ENST00000612369 KIF22Q14807 665 aa22.13■■□□□ 1.13
VCX3A-203ENST00000612369 LRRCC1Q9C099 1032 aa22.13■■□□□ 1.13
VCX3A-203ENST00000612369 CDK5RAP2Q96SN8 1893 aa22.13■■□□□ 1.13
VCX3A-203ENST00000612369 FAM196BA6NMK8 535 aa22.12■■□□□ 1.13
VCX3A-203ENST00000612369 GPAT2Q6NUI2 795 aa22.12■■□□□ 1.13
VCX3A-203ENST00000612369 C17orf99Q6UX52 265 aa22.12■■□□□ 1.13
VCX3A-203ENST00000612369 PARK7Q99497 189 aaKnown RBP22.12■■□□□ 1.13
VCX3A-203ENST00000612369 SLC45A1Q9Y2W3 748 aa22.12■■□□□ 1.13
VCX3A-203ENST00000612369 GNRH1P01148 92 aa22.11■■□□□ 1.13
VCX3A-203ENST00000612369 HLA-DOAP06340 250 aa22.11■■□□□ 1.13
VCX3A-203ENST00000612369 ATP5JP18859 108 aa22.11■■□□□ 1.13
VCX3A-203ENST00000612369 MIGA1Q8NAN2 632 aa22.11■■□□□ 1.13
VCX3A-203ENST00000612369 GINM1Q9NU53 330 aa22.11■■□□□ 1.13
VCX3A-203ENST00000612369 PHIPQ8WWQ0 1821 aa22.1■■□□□ 1.13
VCX3A-203ENST00000612369 USP5P45974 858 aa22.1■■□□□ 1.13
VCX3A-203ENST00000612369 LACTBP83111 547 aaPredicted RBP22.1■■□□□ 1.13
VCX3A-203ENST00000612369 SLC9C2Q5TAH2 1124 aa22.1■■□□□ 1.13
VCX3A-203ENST00000612369 CRACR2BQ8N4Y2 399 aaPredicted RBP22.1■■□□□ 1.13
VCX3A-203ENST00000612369 DNAJC2Q99543 621 aaKnown RBP22.1■■□□□ 1.13
VCX3A-203ENST00000612369 TRIM34Q9BYJ4 488 aa22.1■■□□□ 1.13
VCX3A-203ENST00000612369 PALD1Q9ULE6 856 aa22.1■■□□□ 1.13
VCX3A-203ENST00000612369 ADGRA2Q96PE1 1338 aa22.09■■□□□ 1.13
VCX3A-203ENST00000612369 TRIM75PA6NK02 468 aa22.09■■□□□ 1.13
VCX3A-203ENST00000612369 USP17L5A8MUK1 530 aa22.09■■□□□ 1.13
VCX3A-203ENST00000612369 GOLIM4O00461 696 aa22.09■■□□□ 1.13
VCX3A-203ENST00000612369 ASNSP08243 561 aa22.09■■□□□ 1.13
VCX3A-203ENST00000612369 GADL1Q6ZQY3 521 aa22.09■■□□□ 1.13
VCX3A-203ENST00000612369 ZNF280CQ8ND82 737 aa22.09■■□□□ 1.13
VCX3A-203ENST00000612369 RIOK1Q9BRS2 568 aaKnown RBP22.09■■□□□ 1.13
VCX3A-203ENST00000612369 DCTPP1Q9H773 170 aa22.09■■□□□ 1.13
VCX3A-203ENST00000612369 AS3MTQ9HBK9 375 aa22.09■■□□□ 1.13
VCX3A-203ENST00000612369 PTPRFP10586 1907 aa22.08■■□□□ 1.13
VCX3A-203ENST00000612369 PDE6AP16499 860 aa22.08■■□□□ 1.13
VCX3A-203ENST00000612369 SOX10P56693 466 aa22.08■■□□□ 1.13
VCX3A-203ENST00000612369 CAP1Q01518 475 aa22.08■■□□□ 1.13
VCX3A-203ENST00000612369 BCL11AQ9H165 835 aa22.08■■□□□ 1.13
VCX3A-203ENST00000612369 PAG1Q9NWQ8 432 aa22.08■■□□□ 1.13
VCX3A-203ENST00000612369 CPA4Q9UI42 421 aa22.08■■□□□ 1.13
VCX3A-203ENST00000612369 SIPA1L1O43166 1804 aa22.08■■□□□ 1.12
VCX3A-203ENST00000612369 MAGEB6P1A0A0J9YX57 407 aa22.07■■□□□ 1.12
VCX3A-203ENST00000612369 PRMT2P55345 433 aa22.07■■□□□ 1.12
VCX3A-203ENST00000612369 RRP1P56182 461 aaKnown RBP22.07■■□□□ 1.12
VCX3A-203ENST00000612369 SPP2Q13103 211 aa22.07■■□□□ 1.12
VCX3A-203ENST00000612369 RRP1BQ14684 758 aaKnown RBP22.07■■□□□ 1.12
VCX3A-203ENST00000612369 TTC6Q86TZ1 520 aa22.07■■□□□ 1.12
VCX3A-203ENST00000612369 PROCA1Q8NCQ7 364 aaPredicted RBP22.07■■□□□ 1.12
VCX3A-203ENST00000612369 HAUS7Q99871 368 aa22.07■■□□□ 1.12
VCX3A-203ENST00000612369 BOLA2Q9H3K6 86 aa22.07■■□□□ 1.12
VCX3A-203ENST00000612369 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.07■■□□□ 1.12
VCX3A-203ENST00000612369 SAP30BPQ9UHR5 308 aaKnown RBP22.07■■□□□ 1.12
VCX3A-203ENST00000612369 AGTPBP1Q9UPW5 1226 aa22.07■■□□□ 1.12
VCX3A-203ENST00000612369 ATAD5Q96QE3 1844 aa22.07■■□□□ 1.12
VCX3A-203ENST00000612369 CCDC84Q86UT8 332 aaPredicted RBP22.06■■□□□ 1.12
VCX3A-203ENST00000612369 WDR18Q9BV38 432 aa22.06■■□□□ 1.12
VCX3A-203ENST00000612369 CRNKL1Q9BZJ0 848 aaKnown RBP22.06■■□□□ 1.12
VCX3A-203ENST00000612369 EHD4Q9H223 541 aa22.06■■□□□ 1.12
VCX3A-203ENST00000612369 DNAJC18Q9H819 358 aa22.06■■□□□ 1.12
VCX3A-203ENST00000612369 MYH1P12882 1939 aa22.06■■□□□ 1.12
VCX3A-203ENST00000612369 ZNF532Q9HCE3 1301 aa22.06■■□□□ 1.12
VCX3A-203ENST00000612369 CYP2C8P10632 490 aa22.05■■□□□ 1.12
VCX3A-203ENST00000612369 BCRP11274 1271 aa22.05■■□□□ 1.12
VCX3A-203ENST00000612369 SH3D19Q5HYK7 790 aa22.05■■□□□ 1.12
VCX3A-203ENST00000612369 ARMC5Q96C12 935 aa22.05■■□□□ 1.12
VCX3A-203ENST00000612369 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.05■■□□□ 1.12
VCX3A-203ENST00000612369 HTTP42858 3142 aa22.04■■□□□ 1.12
VCX3A-203ENST00000612369 TCRBV5S4A2TA0A5A2 114 aa22.04■■□□□ 1.12
VCX3A-203ENST00000612369 HOXD10P28358 340 aa22.04■■□□□ 1.12
VCX3A-203ENST00000612369 PABPC4Q13310 644 aaKnown RBP eCLIP22.04■■□□□ 1.12
VCX3A-203ENST00000612369 NBPF11Q86T75 865 aa22.04■■□□□ 1.12
VCX3A-203ENST00000612369 SERPINB13Q9UIV8 391 aa22.04■■□□□ 1.12
VCX3A-203ENST00000612369 PNMA3Q9UL41 463 aa22.04■■□□□ 1.12
VCX3A-203ENST00000612369 SMARCA5O60264 1052 aaPredicted RBP22.03■■□□□ 1.12
VCX3A-203ENST00000612369 TATDN1Q6P1N9 297 aa22.03■■□□□ 1.12
VCX3A-203ENST00000612369 EDC3Q96F86 508 aaKnown RBP22.03■■□□□ 1.12
VCX3A-203ENST00000612369 ARHGAP39Q9C0H5 1083 aa22.03■■□□□ 1.12
VCX3A-203ENST00000612369 ECHDC1Q9NTX5 307 aa22.03■■□□□ 1.12
VCX3A-203ENST00000612369 ADD2P35612 726 aa22.02■■□□□ 1.12
VCX3A-203ENST00000612369 PSMC4P43686 418 aa22.02■■□□□ 1.12
VCX3A-203ENST00000612369 SMCR8Q8TEV9 937 aaPredicted RBP22.02■■□□□ 1.12
VCX3A-203ENST00000612369 GPATCH3Q96I76 525 aa22.02■■□□□ 1.12
VCX3A-203ENST00000612369 ZBTB21Q9ULJ3 1066 aa22.02■■□□□ 1.12
VCX3A-203ENST00000612369 PTCH2Q9Y6C5 1203 aa22.02■■□□□ 1.12
VCX3A-203ENST00000612369 C19orf81C9J6K1 198 aa22.01■■□□□ 1.11
VCX3A-203ENST00000612369 HMGCS2P54868 508 aa22.01■■□□□ 1.11
VCX3A-203ENST00000612369 BACE1P56817 501 aa22.01■■□□□ 1.11
VCX3A-203ENST00000612369 SLC9C1Q4G0N8 1177 aa22.01■■□□□ 1.11
VCX3A-203ENST00000612369 ZSCAN25Q6NSZ9 544 aa22.01■■□□□ 1.11
VCX3A-203ENST00000612369 TAOK2Q9UL54 1235 aa22.01■■□□□ 1.11
VCX3A-203ENST00000612369 PCDHB15Q9Y5E8 787 aa22.01■■□□□ 1.11
VCX3A-203ENST00000612369 LOC285556D6RIA3 1793 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms