RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 CCDC84Q86UT8 332 aaPredicted RBP21.81■■□□□ 1.08
SSBP1-215ENST00000612337 ITPRIPQ8IWB1 547 aa21.81■■□□□ 1.08
SSBP1-215ENST00000612337 SH3RF3Q8TEJ3 882 aaPredicted RBP21.81■■□□□ 1.08
SSBP1-215ENST00000612337 ZNF512BQ96KM6 892 aaPredicted RBP21.81■■□□□ 1.08
SSBP1-215ENST00000612337 NOP58Q9Y2X3 529 aaKnown RBP21.81■■□□□ 1.08
SSBP1-215ENST00000612337 BAG3O95817 575 aa21.8■■□□□ 1.08
SSBP1-215ENST00000612337 PRKCZQ05513 592 aa21.8■■□□□ 1.08
SSBP1-215ENST00000612337 MTFR1Q15390 333 aa21.8■■□□□ 1.08
SSBP1-215ENST00000612337 MIER1Q8N108 512 aa21.8■■□□□ 1.08
SSBP1-215ENST00000612337 TBC1D2Q9BYX2 928 aa21.8■■□□□ 1.08
SSBP1-215ENST00000612337 AATFQ9NY61 560 aaKnown RBP eCLIP21.8■■□□□ 1.08
SSBP1-215ENST00000612337 HERC5Q9UII4 1024 aaKnown RBP21.8■■□□□ 1.08
SSBP1-215ENST00000612337 AGTPBP1Q9UPW5 1226 aa21.8■■□□□ 1.08
SSBP1-215ENST00000612337 ATAD5Q96QE3 1844 aa21.79■■□□□ 1.08
SSBP1-215ENST00000612337 IGSF3O75054 1194 aa21.79■■□□□ 1.08
SSBP1-215ENST00000612337 CYP2E1P05181 493 aaPredicted RBP21.79■■□□□ 1.08
SSBP1-215ENST00000612337 RLBP1P12271 317 aa21.79■■□□□ 1.08
SSBP1-215ENST00000612337 PLCG2P16885 1265 aa21.79■■□□□ 1.08
SSBP1-215ENST00000612337 CAP2P40123 477 aa21.79■■□□□ 1.08
SSBP1-215ENST00000612337 PPP4CP60510 307 aa21.79■■□□□ 1.08
SSBP1-215ENST00000612337 PROCA1Q8NCQ7 364 aaPredicted RBP21.79■■□□□ 1.08
SSBP1-215ENST00000612337 SMCR8Q8TEV9 937 aaPredicted RBP21.79■■□□□ 1.08
SSBP1-215ENST00000612337 DHX36Q9H2U1 1008 aaKnown RBP21.79■■□□□ 1.08
SSBP1-215ENST00000612337 PI4KBQ9UBF8 816 aa21.79■■□□□ 1.08
SSBP1-215ENST00000612337 CEP290O15078 2479 aa21.79■■□□□ 1.08
SSBP1-215ENST00000612337 RRP1BQ14684 758 aaKnown RBP21.78■■□□□ 1.08
SSBP1-215ENST00000612337 ZNF280CQ8ND82 737 aa21.78■■□□□ 1.08
SSBP1-215ENST00000612337 SPP2Q13103 211 aa21.77■■□□□ 1.08
SSBP1-215ENST00000612337 TREML2Q5T2D2 321 aa21.77■■□□□ 1.08
SSBP1-215ENST00000612337 ADGRA1Q86SQ6 560 aa21.77■■□□□ 1.08
SSBP1-215ENST00000612337 SLAIN1Q8ND83 568 aa21.77■■□□□ 1.08
SSBP1-215ENST00000612337 PCDH10Q9P2E7 1040 aa21.77■■□□□ 1.08
SSBP1-215ENST00000612337 DBNLQ9UJU6 430 aaKnown RBP21.77■■□□□ 1.08
SSBP1-215ENST00000612337 PNMA3Q9UL41 463 aa21.77■■□□□ 1.08
SSBP1-215ENST00000612337 MYO5AQ9Y4I1 1855 aaKnown RBP21.77■■□□□ 1.08
SSBP1-215ENST00000612337 LOC285556D6RIA3 1793 aa21.76■■□□□ 1.07
SSBP1-215ENST00000612337 SIPA1L1O43166 1804 aa21.76■■□□□ 1.07
SSBP1-215ENST00000612337 USP17L5A8MUK1 530 aa21.76■■□□□ 1.07
SSBP1-215ENST00000612337 ZAP70P43403 619 aa21.76■■□□□ 1.07
SSBP1-215ENST00000612337 UBXN2AP68543 259 aa21.76■■□□□ 1.07
SSBP1-215ENST00000612337 NKX2-3Q8TAU0 364 aa21.76■■□□□ 1.07
SSBP1-215ENST00000612337 TGFBRAP1Q8WUH2 860 aa21.76■■□□□ 1.07
SSBP1-215ENST00000612337 SHISA4Q96DD7 197 aa21.76■■□□□ 1.07
SSBP1-215ENST00000612337 CDK5RAP2Q96SN8 1893 aa21.76■■□□□ 1.07
SSBP1-215ENST00000612337 BIN2Q9UBW5 565 aaPredicted RBP21.76■■□□□ 1.07
SSBP1-215ENST00000612337 GABRQQ9UN88 632 aa21.76■■□□□ 1.07
SSBP1-215ENST00000612337 CCL5P13501 91 aa21.75■■□□□ 1.07
SSBP1-215ENST00000612337 MAPKAPK5Q8IW41 473 aa21.75■■□□□ 1.07
SSBP1-215ENST00000612337 EAF2Q96CJ1 260 aaPredicted RBP21.75■■□□□ 1.07
SSBP1-215ENST00000612337 CCDC8Q9H0W5 538 aaPredicted RBP21.75■■□□□ 1.07
SSBP1-215ENST00000612337 PIH1D3Q9NQM4 214 aaKnown RBP21.75■■□□□ 1.07
SSBP1-215ENST00000612337 TLR7Q9NYK1 1049 aaKnown RBP21.75■■□□□ 1.07
SSBP1-215ENST00000612337 FOCADQ5VW36 1801 aa21.75■■□□□ 1.07
SSBP1-215ENST00000612337 FLT1P17948 1338 aa21.75■■□□□ 1.07
SSBP1-215ENST00000612337 TNPO2O14787 897 aaKnown RBP21.74■■□□□ 1.07
SSBP1-215ENST00000612337 GJB1P08034 283 aa21.74■■□□□ 1.07
SSBP1-215ENST00000612337 FLT3LGP49771 235 aa21.74■■□□□ 1.07
SSBP1-215ENST00000612337 HMGCS2P54868 508 aa21.74■■□□□ 1.07
SSBP1-215ENST00000612337 FAM110CQ1W6H9 321 aa21.74■■□□□ 1.07
SSBP1-215ENST00000612337 HABP4Q5JVS0 413 aaKnown RBP21.74■■□□□ 1.07
SSBP1-215ENST00000612337 DIEXFQ68CQ4 756 aaKnown RBP21.74■■□□□ 1.07
SSBP1-215ENST00000612337 CEP85Q6P2H3 762 aa21.74■■□□□ 1.07
SSBP1-215ENST00000612337 METTL16Q86W50 562 aaKnown RBP21.74■■□□□ 1.07
SSBP1-215ENST00000612337 ANKRD13CQ8N6S4 541 aa21.74■■□□□ 1.07
SSBP1-215ENST00000612337 AS3MTQ9HBK9 375 aa21.74■■□□□ 1.07
SSBP1-215ENST00000612337 ZBED9Q6R2W3 1325 aa21.74■■□□□ 1.07
SSBP1-215ENST00000612337 GJA8P48165 433 aa21.73■■□□□ 1.07
SSBP1-215ENST00000612337 PABPC4Q13310 644 aaKnown RBP eCLIP21.73■■□□□ 1.072e-25■■■□□ 18
SSBP1-215ENST00000612337 SH3D19Q5HYK7 790 aa21.73■■□□□ 1.07
SSBP1-215ENST00000612337 FOXP4Q8IVH2 680 aaPredicted RBP21.73■■□□□ 1.07
SSBP1-215ENST00000612337 RNF208Q9H0X6 261 aa21.73■■□□□ 1.07
SSBP1-215ENST00000612337 DOCK3Q8IZD9 2030 aa21.72■■□□□ 1.07
SSBP1-215ENST00000612337 ADCY3O60266 1144 aa21.72■■□□□ 1.07
SSBP1-215ENST00000612337 ASNSP08243 561 aa21.72■■□□□ 1.07
SSBP1-215ENST00000612337 GCLCP48506 637 aaPredicted RBP21.72■■□□□ 1.07
SSBP1-215ENST00000612337 IRF5Q13568 498 aa21.72■■□□□ 1.07
SSBP1-215ENST00000612337 PXYLP1Q8TE99 480 aa21.72■■□□□ 1.07
SSBP1-215ENST00000612337 WDR18Q9BV38 432 aa21.72■■□□□ 1.07
SSBP1-215ENST00000612337 DNAJC18Q9H819 358 aa21.72■■□□□ 1.07
SSBP1-215ENST00000612337 CYP7A1P22680 504 aa21.71■■□□□ 1.07
SSBP1-215ENST00000612337 COA7Q96BR5 231 aa21.71■■□□□ 1.07
SSBP1-215ENST00000612337 PALD1Q9ULE6 856 aa21.71■■□□□ 1.07
SSBP1-215ENST00000612337 IDH1O75874 414 aaKnown RBP21.7■■□□□ 1.06
SSBP1-215ENST00000612337 BACE1P56817 501 aa21.7■■□□□ 1.06
SSBP1-215ENST00000612337 DYNLL1P63167 89 aaKnown RBP21.7■■□□□ 1.06
SSBP1-215ENST00000612337 ERC1Q8IUD2 1116 aa21.7■■□□□ 1.06
SSBP1-215ENST00000612337 CRACR2BQ8N4Y2 399 aaPredicted RBP21.7■■□□□ 1.06
SSBP1-215ENST00000612337 PANK1Q8TE04 598 aa21.7■■□□□ 1.06
SSBP1-215ENST00000612337 TRIM34Q9BYJ4 488 aa21.7■■□□□ 1.06
SSBP1-215ENST00000612337 ASCC2Q9H1I8 757 aaPredicted RBP21.7■■□□□ 1.06
SSBP1-215ENST00000612337 GINM1Q9NU53 330 aa21.7■■□□□ 1.06
SSBP1-215ENST00000612337 HLA-DOAP06340 250 aa21.69■■□□□ 1.06
SSBP1-215ENST00000612337 ELNP15502 786 aa21.69■■□□□ 1.06
SSBP1-215ENST00000612337 MTMR2Q13614 643 aa21.69■■□□□ 1.06
SSBP1-215ENST00000612337 UBE2Q1Q7Z7E8 422 aa21.69■■□□□ 1.06
SSBP1-215ENST00000612337 CERS3Q8IU89 383 aa21.69■■□□□ 1.06
SSBP1-215ENST00000612337 U2AF1L4Q8WU68 220 aaKnown RBP21.69■■□□□ 1.06
SSBP1-215ENST00000612337 UNC93B1Q9H1C4 597 aa21.69■■□□□ 1.06
SSBP1-215ENST00000612337 EXOC6BQ9Y2D4 811 aa21.69■■□□□ 1.06
SSBP1-215ENST00000612337 RANBP2P49792 3224 aaKnown RBP21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms