RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-223ENST00000611614 FBXW7Q969H0 707 aa16.11■□□□□ 0.17
COPS7B-223ENST00000611614 PLCB2Q00722 1185 aa16.11■□□□□ 0.17
COPS7B-223ENST00000611614 GRIPAP1Q4V328 841 aa16.11■□□□□ 0.17
COPS7B-223ENST00000611614 SLF2Q8IX21 1173 aa16.11■□□□□ 0.17
COPS7B-223ENST00000611614 KIAA1524Q8TCG1 905 aa16.11■□□□□ 0.17
COPS7B-223ENST00000611614 ZNF830Q96NB3 372 aaPredicted RBP16.11■□□□□ 0.17
COPS7B-223ENST00000611614 USP28Q96RU2 1077 aa16.11■□□□□ 0.17
COPS7B-223ENST00000611614 CRNKL1Q9BZJ0 848 aaKnown RBP16.11■□□□□ 0.17
COPS7B-223ENST00000611614 HPS5Q9UPZ3 1129 aa16.11■□□□□ 0.17
COPS7B-223ENST00000611614 ATF5Q9Y2D1 282 aaPredicted RBP16.11■□□□□ 0.17
COPS7B-223ENST00000611614 GOLGA8BA8MQT2 603 aa16.1■□□□□ 0.17
COPS7B-223ENST00000611614 GSG1L2A8MUP6 293 aa16.1■□□□□ 0.17
COPS7B-223ENST00000611614 PPFIA3O75145 1194 aa16.1■□□□□ 0.17
COPS7B-223ENST00000611614 BAG3O95817 575 aa16.1■□□□□ 0.17
COPS7B-223ENST00000611614 GUCY1B3Q02153 619 aa16.1■□□□□ 0.17
COPS7B-223ENST00000611614 R3HDM1Q15032 1099 aaKnown RBP16.1■□□□□ 0.17
COPS7B-223ENST00000611614 ANO6Q4KMQ2 910 aa16.1■□□□□ 0.17
COPS7B-223ENST00000611614 SUPT20HQ8NEM7 779 aa16.1■□□□□ 0.17
COPS7B-223ENST00000611614 UPF1Q92900 1129 aaKnown RBP eCLIP16.1■□□□□ 0.171e-6■■□□□ 13.9
COPS7B-223ENST00000611614 PRKAB2O43741 272 aa16.1■□□□□ 0.17
COPS7B-223ENST00000611614 GTF2IP78347 998 aa16.1■□□□□ 0.17
COPS7B-223ENST00000611614 RIOK1Q9BRS2 568 aaKnown RBP16.1■□□□□ 0.17
COPS7B-223ENST00000611614 AATFQ9NY61 560 aaKnown RBP eCLIP16.1■□□□□ 0.17
COPS7B-223ENST00000611614 CCAR1Q8IX12 1150 aaKnown RBP16.09■□□□□ 0.17
COPS7B-223ENST00000611614 FTOQ9C0B1 505 aaKnown RBP eCLIP16.09■□□□□ 0.17
COPS7B-223ENST00000611614 NBPF3Q9H094 633 aa16.09■□□□□ 0.17
COPS7B-223ENST00000611614 DOK7Q18PE1 504 aa16.09■□□□□ 0.17
COPS7B-223ENST00000611614 CERS3Q8IU89 383 aa16.09■□□□□ 0.17
COPS7B-223ENST00000611614 CBX8Q9HC52 389 aa16.09■□□□□ 0.17
COPS7B-223ENST00000611614 FAM205AQ6ZU69 1335 aa16.09■□□□□ 0.17
COPS7B-223ENST00000611614 CTAGE5O15320 804 aa16.08■□□□□ 0.17
COPS7B-223ENST00000611614 DYNLL1P63167 89 aaKnown RBP16.08■□□□□ 0.17
COPS7B-223ENST00000611614 PODNQ7Z5L7 613 aa16.08■□□□□ 0.17
COPS7B-223ENST00000611614 ZNF384Q8TF68 577 aa16.08■□□□□ 0.17
COPS7B-223ENST00000611614 SDR42E1Q8WUS8 393 aa16.08■□□□□ 0.17
COPS7B-223ENST00000611614 C8orf76Q96K31 380 aa16.08■□□□□ 0.17
COPS7B-223ENST00000611614 EPB41L4AQ9HCS5 686 aaPredicted RBP16.08■□□□□ 0.17
COPS7B-223ENST00000611614 ORC3Q9UBD5 711 aaPredicted RBP16.08■□□□□ 0.17
COPS7B-223ENST00000611614 PRDM4Q9UKN5 801 aa16.08■□□□□ 0.17
COPS7B-223ENST00000611614 CPLX1O14810 134 aa16.08■□□□□ 0.16
COPS7B-223ENST00000611614 C21orf2O43822 256 aa16.08■□□□□ 0.16
COPS7B-223ENST00000611614 DPEP1P16444 411 aa16.08■□□□□ 0.16
COPS7B-223ENST00000611614 LUZP1Q86V48 1076 aa16.08■□□□□ 0.16
COPS7B-223ENST00000611614 TBC1D10CQ8IV04 446 aa16.08■□□□□ 0.16
COPS7B-223ENST00000611614 PPP1R1BQ9UD71 204 aaPredicted RBP16.08■□□□□ 0.16
COPS7B-223ENST00000611614 CAVIN2O95810 425 aa16.07■□□□□ 0.16
COPS7B-223ENST00000611614 TGFB2P61812 414 aa16.07■□□□□ 0.16
COPS7B-223ENST00000611614 UTP14CQ5TAP6 766 aaKnown RBP16.07■□□□□ 0.16
COPS7B-223ENST00000611614 CCDC73Q6ZRK6 1079 aa16.07■□□□□ 0.16
COPS7B-223ENST00000611614 RTKN2Q8IZC4 609 aa16.07■□□□□ 0.16
COPS7B-223ENST00000611614 ZNF710Q8N1W2 664 aa16.07■□□□□ 0.16
COPS7B-223ENST00000611614 RTEL1Q9NZ71 1219 aa16.07■□□□□ 0.16
COPS7B-223ENST00000611614 SUGT1Q9Y2Z0 365 aa16.07■□□□□ 0.16
COPS7B-223ENST00000611614 CCDC93Q567U6 631 aa16.07■□□□□ 0.16
COPS7B-223ENST00000611614 RGS22Q8NE09 1264 aa16.07■□□□□ 0.16
COPS7B-223ENST00000611614 FBXO18Q8NFZ0 1043 aa16.07■□□□□ 0.16
COPS7B-223ENST00000611614 C7orf43Q8WVR3 580 aa16.07■□□□□ 0.16
COPS7B-223ENST00000611614 RTFDC1Q9BY42 306 aaPredicted RBP16.07■□□□□ 0.16
COPS7B-223ENST00000611614 GOLPH3LQ9H4A5 285 aa16.07■□□□□ 0.16
COPS7B-223ENST00000611614 RNF41Q9H4P4 317 aaPredicted RBP16.07■□□□□ 0.16
COPS7B-223ENST00000611614 CNNM2Q9H8M5 875 aa16.07■□□□□ 0.16
COPS7B-223ENST00000611614 ANGEL1Q9UNK9 670 aaKnown RBP16.07■□□□□ 0.16
COPS7B-223ENST00000611614 DUOX1Q9NRD9 1551 aa16.06■□□□□ 0.16
COPS7B-223ENST00000611614 MFSD6Q6ZSS7 791 aa16.06■□□□□ 0.16
COPS7B-223ENST00000611614 ATP8A2Q9NTI2 1148 aa16.06■□□□□ 0.16
COPS7B-223ENST00000611614 CACNA1SQ13698 1873 aa16.06■□□□□ 0.16
COPS7B-223ENST00000611614 LTBP1Q14766 1721 aa16.06■□□□□ 0.16
COPS7B-223ENST00000611614 MINDY4BA8MYZ0 360 aa16.06■□□□□ 0.16
COPS7B-223ENST00000611614 SH2B2O14492 632 aaPredicted RBP16.06■□□□□ 0.16
COPS7B-223ENST00000611614 ME1P48163 572 aa16.06■□□□□ 0.16
COPS7B-223ENST00000611614 DIXDC1Q155Q3 683 aa16.06■□□□□ 0.16
COPS7B-223ENST00000611614 SOGA3Q5TF21 947 aa16.06■□□□□ 0.16
COPS7B-223ENST00000611614 OTUD7BQ6GQQ9 843 aa16.06■□□□□ 0.16
COPS7B-223ENST00000611614 CYB5R4Q7L1T6 521 aa16.06■□□□□ 0.16
COPS7B-223ENST00000611614 KCNF1Q9H3M0 494 aa16.06■□□□□ 0.16
COPS7B-223ENST00000611614 TOMM22Q9NS69 142 aa16.06■□□□□ 0.16
COPS7B-223ENST00000611614 PIM2Q9P1W9 311 aa16.06■□□□□ 0.16
COPS7B-223ENST00000611614 FAM160A1Q05DH4 1040 aa16.05■□□□□ 0.16
COPS7B-223ENST00000611614 SNW1Q13573 536 aaKnown RBP16.05■□□□□ 0.16
COPS7B-223ENST00000611614 BRAPQ7Z569 592 aa16.05■□□□□ 0.16
COPS7B-223ENST00000611614 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.05■□□□□ 0.16
COPS7B-223ENST00000611614 RAB11FIP4Q86YS3 637 aa16.05■□□□□ 0.16
COPS7B-223ENST00000611614 ENGASEQ8NFI3 743 aa16.05■□□□□ 0.16
COPS7B-223ENST00000611614 KRT23Q9C075 422 aa16.05■□□□□ 0.16
COPS7B-223ENST00000611614 DNAJC25Q9H1X3 360 aa16.05■□□□□ 0.16
COPS7B-223ENST00000611614 DBNDD1Q9H9R9 158 aa16.05■□□□□ 0.16
COPS7B-223ENST00000611614 SLX4Q8IY92 1834 aa16.05■□□□□ 0.16
COPS7B-223ENST00000611614 MROH7-TTC4A0A0A0MT08 1334 aa16.05■□□□□ 0.16
COPS7B-223ENST00000611614 CCDC88AQ3V6T2 1871 aa16.05■□□□□ 0.16
COPS7B-223ENST00000611614 PLCG2P16885 1265 aa16.05■□□□□ 0.16
COPS7B-223ENST00000611614 KCNA4P22459 653 aa16.05■□□□□ 0.16
COPS7B-223ENST00000611614 USP5P45974 858 aa16.05■□□□□ 0.16
COPS7B-223ENST00000611614 ZNF165P49910 485 aa16.05■□□□□ 0.16
COPS7B-223ENST00000611614 PPARAQ07869 468 aa16.05■□□□□ 0.16
COPS7B-223ENST00000611614 AKNAD1Q5T1N1 836 aa16.05■□□□□ 0.16
COPS7B-223ENST00000611614 AMOTL1Q8IY63 956 aa16.05■□□□□ 0.16
COPS7B-223ENST00000611614 TMEM87BQ96K49 555 aa16.05■□□□□ 0.16
COPS7B-223ENST00000611614 KINO60870 393 aaKnown RBP16.04■□□□□ 0.16
COPS7B-223ENST00000611614 C17orf53Q8N3J3 647 aaPredicted RBP16.04■□□□□ 0.16
COPS7B-223ENST00000611614 FSIP1Q8NA03 581 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms