RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 TRMT44Q8IYL2 757 aaKnown RBP19.17■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 SOCS4Q8WXH5 440 aa19.17■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 DDX4Q9NQI0 724 aaKnown RBP19.17■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 GAKO14976 1311 aa19.17■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 PTPRFP10586 1907 aa19.17■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 TBC1D12O60347 775 aa19.16■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 ZKSCAN1P17029 563 aaPredicted RBP19.16■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 BTDP43251 543 aa19.16■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 IRX3P78415 501 aaPredicted RBP19.16■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 PDE3AQ14432 1141 aa19.16■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 LRRC26Q2I0M4 334 aa19.16■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 MAP3K21Q5TCX8 1036 aa19.16■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 CCAR1Q8IX12 1150 aaKnown RBP19.16■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 CEP126Q9P2H0 1117 aa19.16■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 ABCF2Q9UG63 623 aa19.16■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 RFX7Q2KHR2 1363 aa19.16■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 COL6A1P12109 1028 aa19.15■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 CCDC184Q52MB2 194 aa19.15■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 AS3MTQ9HBK9 375 aa19.15■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 MORF4L1Q9UBU8 362 aa19.15■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 PHIPQ8WWQ0 1821 aa19.14■□□□□ 0.65
NEDD8-MDP1-204ENST00000605847 FAM196BA6NMK8 535 aa19.14■□□□□ 0.65
NEDD8-MDP1-204ENST00000605847 XRCC5P13010 732 aaKnown RBP19.14■□□□□ 0.65
NEDD8-MDP1-204ENST00000605847 PHKA1P46020 1223 aa19.14■□□□□ 0.65
NEDD8-MDP1-204ENST00000605847 CACNB2Q08289 660 aaPredicted RBP19.14■□□□□ 0.65
NEDD8-MDP1-204ENST00000605847 SPTY2D1Q68D10 685 aaPredicted RBP19.14■□□□□ 0.65
NEDD8-MDP1-204ENST00000605847 ATG9AQ7Z3C6 839 aa19.14■□□□□ 0.65
NEDD8-MDP1-204ENST00000605847 SIL1Q9H173 461 aa19.14■□□□□ 0.65
NEDD8-MDP1-204ENST00000605847 PRKAG2Q9UGJ0 569 aa19.14■□□□□ 0.65
NEDD8-MDP1-204ENST00000605847 USP17L5A8MUK1 530 aa19.13■□□□□ 0.65
NEDD8-MDP1-204ENST00000605847 RFX5P48382 616 aaPredicted RBP19.13■□□□□ 0.65
NEDD8-MDP1-204ENST00000605847 GPRC5AQ8NFJ5 357 aa19.13■□□□□ 0.65
NEDD8-MDP1-204ENST00000605847 PRDM6Q9NQX0 595 aa19.13■□□□□ 0.65
NEDD8-MDP1-204ENST00000605847 DOCK3Q8IZD9 2030 aa19.13■□□□□ 0.65
NEDD8-MDP1-204ENST00000605847 MROH7-TTC4A0A0A0MT08 1334 aa19.12■□□□□ 0.65
NEDD8-MDP1-204ENST00000605847 MAPK4P31152 587 aa19.12■□□□□ 0.65
NEDD8-MDP1-204ENST00000605847 SH3D19Q5HYK7 790 aa19.12■□□□□ 0.65
NEDD8-MDP1-204ENST00000605847 FAM163AQ96GL9 167 aaPredicted RBP19.12■□□□□ 0.65
NEDD8-MDP1-204ENST00000605847 USP44Q9H0E7 712 aa19.12■□□□□ 0.65
NEDD8-MDP1-204ENST00000605847 CWC22Q9HCG8 908 aaKnown RBP19.12■□□□□ 0.65
NEDD8-MDP1-204ENST00000605847 TMOD4Q9NZQ9 345 aa19.12■□□□□ 0.65
NEDD8-MDP1-204ENST00000605847 FBXO3Q9UK99 471 aa19.12■□□□□ 0.65
NEDD8-MDP1-204ENST00000605847 CCND3P30281 292 aaPredicted RBP19.11■□□□□ 0.65
NEDD8-MDP1-204ENST00000605847 CAP2P40123 477 aa19.11■□□□□ 0.65
NEDD8-MDP1-204ENST00000605847 RGS2P41220 211 aa19.11■□□□□ 0.65
NEDD8-MDP1-204ENST00000605847 MAFAQ8NHW3 353 aaPredicted RBP19.11■□□□□ 0.65
NEDD8-MDP1-204ENST00000605847 SENP6Q9GZR1 1112 aaPredicted RBP19.11■□□□□ 0.65
NEDD8-MDP1-204ENST00000605847 LOC285556D6RIA3 1793 aa19.11■□□□□ 0.65
NEDD8-MDP1-204ENST00000605847 MYH2Q9UKX2 1941 aa19.1■□□□□ 0.65
NEDD8-MDP1-204ENST00000605847 PTPRCP08575 1304 aa19.1■□□□□ 0.65
NEDD8-MDP1-204ENST00000605847 CIAO1O76071 339 aa19.1■□□□□ 0.65
NEDD8-MDP1-204ENST00000605847 CCDC102BQ68D86 513 aa19.1■□□□□ 0.65
NEDD8-MDP1-204ENST00000605847 LHX8Q68G74 356 aa19.1■□□□□ 0.65
NEDD8-MDP1-204ENST00000605847 CDX2Q99626 313 aaPredicted RBP19.1■□□□□ 0.65
NEDD8-MDP1-204ENST00000605847 COL2A1P02458 1487 aaPredicted RBP19.09■□□□□ 0.65
NEDD8-MDP1-204ENST00000605847 NPM3O75607 178 aaKnown RBP19.09■□□□□ 0.65
NEDD8-MDP1-204ENST00000605847 HERVK_113P62684 666 aa19.09■□□□□ 0.65
NEDD8-MDP1-204ENST00000605847 MTMR2Q13614 643 aa19.09■□□□□ 0.65
NEDD8-MDP1-204ENST00000605847 ERICH6Q7L0X2 663 aa19.09■□□□□ 0.65
NEDD8-MDP1-204ENST00000605847 SYMPKQ92797 1274 aaKnown RBP19.09■□□□□ 0.65
NEDD8-MDP1-204ENST00000605847 P2RX7Q99572 595 aaKnown RBP19.09■□□□□ 0.65
NEDD8-MDP1-204ENST00000605847 GPR75-ASB3A0A0A6YYF3 556 aa19.08■□□□□ 0.64
NEDD8-MDP1-204ENST00000605847 HOXA7P31268 230 aaPredicted RBP19.08■□□□□ 0.64
NEDD8-MDP1-204ENST00000605847 IL15P40933 162 aaPredicted RBP19.08■□□□□ 0.64
NEDD8-MDP1-204ENST00000605847 MECOMQ03112 1051 aa19.08■□□□□ 0.64
NEDD8-MDP1-204ENST00000605847 RASGRF1Q13972 1273 aa19.08■□□□□ 0.64
NEDD8-MDP1-204ENST00000605847 CCL14Q16627 93 aa19.08■□□□□ 0.64
NEDD8-MDP1-204ENST00000605847 APBA2Q99767 749 aa19.08■□□□□ 0.64
NEDD8-MDP1-204ENST00000605847 PEX10O60683 326 aa19.07■□□□□ 0.64
NEDD8-MDP1-204ENST00000605847 MAP4K4O95819 1239 aaPredicted RBP19.07■□□□□ 0.64
NEDD8-MDP1-204ENST00000605847 LDHCP07864 332 aa19.07■□□□□ 0.64
NEDD8-MDP1-204ENST00000605847 ATN1P54259 1190 aaPredicted RBP19.07■□□□□ 0.64
NEDD8-MDP1-204ENST00000605847 BACE1P56817 501 aa19.07■□□□□ 0.64
NEDD8-MDP1-204ENST00000605847 RHBDL3P58872 404 aa19.07■□□□□ 0.64
NEDD8-MDP1-204ENST00000605847 GPR142Q7Z601 462 aa19.07■□□□□ 0.64
NEDD8-MDP1-204ENST00000605847 PLEKHH3Q7Z736 793 aa19.07■□□□□ 0.64
NEDD8-MDP1-204ENST00000605847 PAGR1Q9BTK6 254 aa19.07■□□□□ 0.64
NEDD8-MDP1-204ENST00000605847 MRS2Q9HD23 443 aa19.07■□□□□ 0.64
NEDD8-MDP1-204ENST00000605847 TXNRD2Q9NNW7 524 aa19.07■□□□□ 0.64
NEDD8-MDP1-204ENST00000605847 HERC5Q9UII4 1024 aaKnown RBP19.07■□□□□ 0.64
NEDD8-MDP1-204ENST00000605847 PLXNB2O15031 1838 aa19.07■□□□□ 0.64
NEDD8-MDP1-204ENST00000605847 PDS5AQ29RF7 1337 aaKnown RBP19.06■□□□□ 0.64
NEDD8-MDP1-204ENST00000605847 ZBTB22O15209 634 aa19.06■□□□□ 0.64
NEDD8-MDP1-204ENST00000605847 ADORA1P30542 326 aa19.06■□□□□ 0.64
NEDD8-MDP1-204ENST00000605847 ERVK-9P63128 1117 aa19.06■□□□□ 0.64
NEDD8-MDP1-204ENST00000605847 ERVK-24P63145 666 aa19.06■□□□□ 0.64
NEDD8-MDP1-204ENST00000605847 GSTO1P78417 241 aa19.06■□□□□ 0.64
NEDD8-MDP1-204ENST00000605847 MFSD14CQ5VZR4 134 aa19.06■□□□□ 0.64
NEDD8-MDP1-204ENST00000605847 MRPL50Q8N5N7 158 aaKnown RBP19.06■□□□□ 0.64
NEDD8-MDP1-204ENST00000605847 GTF3C2Q8WUA4 911 aaPredicted RBP19.06■□□□□ 0.64
NEDD8-MDP1-204ENST00000605847 WDR18Q9BV38 432 aa19.06■□□□□ 0.64
NEDD8-MDP1-204ENST00000605847 SEMA6BQ9H3T3 888 aa19.06■□□□□ 0.64
NEDD8-MDP1-204ENST00000605847 C19orf81C9J6K1 198 aa19.05■□□□□ 0.64
NEDD8-MDP1-204ENST00000605847 ASNSP08243 561 aa19.05■□□□□ 0.64
NEDD8-MDP1-204ENST00000605847 CNGA1P29973 690 aa19.05■□□□□ 0.64
NEDD8-MDP1-204ENST00000605847 MORN1Q5T089 497 aa19.05■□□□□ 0.64
NEDD8-MDP1-204ENST00000605847 USP6NLQ92738 828 aa19.05■□□□□ 0.64
NEDD8-MDP1-204ENST00000605847 PORCNQ9H237 461 aa19.05■□□□□ 0.64
NEDD8-MDP1-204ENST00000605847 RBPJLQ9UBG7 517 aa19.05■□□□□ 0.64
NEDD8-MDP1-204ENST00000605847 VCANP13611 3396 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms