RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 EHHADHQ08426 723 aa5□□□□□ -1.61
HMGB1P50-201ENST00000605814 MAP7Q14244 749 aa5□□□□□ -1.61
HMGB1P50-201ENST00000605814 SYCP1Q15431 976 aa5□□□□□ -1.61
HMGB1P50-201ENST00000605814 EXOSC6Q5RKV6 272 aaKnown RBP5□□□□□ -1.61
HMGB1P50-201ENST00000605814 SKAP1Q86WV1 359 aa5□□□□□ -1.61
HMGB1P50-201ENST00000605814 CREBRFQ8IUR6 639 aa5□□□□□ -1.61
HMGB1P50-201ENST00000605814 PBXIP1Q96AQ6 731 aa5□□□□□ -1.61
HMGB1P50-201ENST00000605814 TMPRSS13Q9BYE2 586 aa5□□□□□ -1.61
HMGB1P50-201ENST00000605814 SOX17Q9H6I2 414 aaPredicted RBP5□□□□□ -1.61
HMGB1P50-201ENST00000605814 SUGCTQ9HAC7 445 aa5□□□□□ -1.61
HMGB1P50-201ENST00000605814 RAD18Q9NS91 495 aa5□□□□□ -1.61
HMGB1P50-201ENST00000605814 KDM6BO15054 1643 aa5□□□□□ -1.61
HMGB1P50-201ENST00000605814 LAMC1P11047 1609 aa5□□□□□ -1.61
HMGB1P50-201ENST00000605814 POLA1P09884 1462 aaPredicted RBP5□□□□□ -1.61
HMGB1P50-201ENST00000605814 BICRAQ9NZM4 1560 aa4.99□□□□□ -1.61
HMGB1P50-201ENST00000605814 KIF21AQ7Z4S6 1674 aa4.99□□□□□ -1.61
HMGB1P50-201ENST00000605814 RTEL1-TNFRSF6BF6WH68 1400 aa4.99□□□□□ -1.61
HMGB1P50-201ENST00000605814 KRTAP4-8A0A0G2JLE6 195 aa4.99□□□□□ -1.61
HMGB1P50-201ENST00000605814 NFKBIEO00221 500 aa4.99□□□□□ -1.61
HMGB1P50-201ENST00000605814 EREGO14944 169 aa4.99□□□□□ -1.61
HMGB1P50-201ENST00000605814 TIAF1O95411 115 aa4.99□□□□□ -1.61
HMGB1P50-201ENST00000605814 MPSTP25325 297 aa4.99□□□□□ -1.61
HMGB1P50-201ENST00000605814 USP5P45974 858 aa4.99□□□□□ -1.61
HMGB1P50-201ENST00000605814 EIF1AXP47813 144 aaKnown RBP4.99□□□□□ -1.61
HMGB1P50-201ENST00000605814 CYP27A1Q02318 531 aa4.99□□□□□ -1.61
HMGB1P50-201ENST00000605814 GABPB1Q06547 395 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P50-201ENST00000605814 MSMPQ1L6U9 139 aa4.99□□□□□ -1.61
HMGB1P50-201ENST00000605814 HGSNATQ68CP4 663 aa4.99□□□□□ -1.61
HMGB1P50-201ENST00000605814 OGFOD2Q6N063 350 aa4.99□□□□□ -1.61
HMGB1P50-201ENST00000605814 PDCL2Q8N4E4 241 aa4.99□□□□□ -1.61
HMGB1P50-201ENST00000605814 DDX54Q8TDD1 881 aaKnown RBP4.99□□□□□ -1.61
HMGB1P50-201ENST00000605814 TNPO1Q92973 898 aaKnown RBP4.99□□□□□ -1.61
HMGB1P50-201ENST00000605814 NXPE3Q969Y0 559 aa4.99□□□□□ -1.61
HMGB1P50-201ENST00000605814 C22orf23Q9BZE7 217 aa4.99□□□□□ -1.61
HMGB1P50-201ENST00000605814 GZF1Q9H116 711 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P50-201ENST00000605814 GGNBP2Q9H3C7 697 aa4.99□□□□□ -1.61
HMGB1P50-201ENST00000605814 ZFYVE1Q9HBF4 777 aa4.99□□□□□ -1.61
HMGB1P50-201ENST00000605814 POLIQ9UNA4 740 aa4.99□□□□□ -1.61
HMGB1P50-201ENST00000605814 AP4E1Q9UPM8 1137 aa4.99□□□□□ -1.61
HMGB1P50-201ENST00000605814 MTMR7Q9Y216 660 aa4.99□□□□□ -1.61
HMGB1P50-201ENST00000605814 AMOTL2Q9Y2J4 779 aa4.99□□□□□ -1.61
HMGB1P50-201ENST00000605814 LRRIQ1Q96JM4 1722 aa4.99□□□□□ -1.61
HMGB1P50-201ENST00000605814 NPC1L1Q9UHC9 1359 aa4.99□□□□□ -1.61
HMGB1P50-201ENST00000605814 YEATS2Q9ULM3 1422 aa4.98□□□□□ -1.61
HMGB1P50-201ENST00000605814 CC2D2AQ9P2K1 1620 aa4.98□□□□□ -1.61
HMGB1P50-201ENST00000605814 E9PSI1 815 aa4.98□□□□□ -1.61
HMGB1P50-201ENST00000605814 GOLGA6L22H0YM25 854 aa4.98□□□□□ -1.61
HMGB1P50-201ENST00000605814 JUNBP17275 347 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P50-201ENST00000605814 MMP14P50281 582 aa4.98□□□□□ -1.61
HMGB1P50-201ENST00000605814 SOX4Q06945 474 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P50-201ENST00000605814 CDPF1Q6NVV7 123 aa4.98□□□□□ -1.61
HMGB1P50-201ENST00000605814 DYMQ7RTS9 669 aa4.98□□□□□ -1.61
HMGB1P50-201ENST00000605814 VN1R5Q7Z5H4 357 aa4.98□□□□□ -1.61
HMGB1P50-201ENST00000605814 ZAR1Q86SH2 424 aa4.98□□□□□ -1.61
HMGB1P50-201ENST00000605814 TEX2Q8IWB9 1127 aa4.98□□□□□ -1.61
HMGB1P50-201ENST00000605814 HSCBQ8IWL3 235 aa4.98□□□□□ -1.61
HMGB1P50-201ENST00000605814 DNAJC2Q99543 621 aaKnown RBP4.98□□□□□ -1.61
HMGB1P50-201ENST00000605814 TSPYL1Q9H0U9 437 aa4.98□□□□□ -1.61
HMGB1P50-201ENST00000605814 CHRDQ9H2X0 955 aa4.98□□□□□ -1.61
HMGB1P50-201ENST00000605814 RWDD1Q9H446 243 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P50-201ENST00000605814 RRP7BPQ9NSQ0 103 aa4.98□□□□□ -1.61
HMGB1P50-201ENST00000605814 ZHX1Q9UKY1 873 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P50-201ENST00000605814 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P50-201ENST00000605814 NKTRP30414 1462 aaKnown RBP4.98□□□□□ -1.61
HMGB1P50-201ENST00000605814 PLXNC1O60486 1568 aa4.98□□□□□ -1.61
HMGB1P50-201ENST00000605814 ABCC2Q92887 1545 aa4.97□□□□□ -1.61
HMGB1P50-201ENST00000605814 CUL7Q14999 1698 aa4.97□□□□□ -1.61
HMGB1P50-201ENST00000605814 PZPP20742 1482 aa4.97□□□□□ -1.61
HMGB1P50-201ENST00000605814 GPRASP1Q5JY77 1395 aa4.97□□□□□ -1.61
HMGB1P50-201ENST00000605814 TULP2O00295 520 aa4.97□□□□□ -1.61
HMGB1P50-201ENST00000605814 TNFRSF21O75509 655 aa4.97□□□□□ -1.61
HMGB1P50-201ENST00000605814 PRNPP04156 253 aa4.97□□□□□ -1.61
HMGB1P50-201ENST00000605814 CYP11A1P05108 521 aa4.97□□□□□ -1.61
HMGB1P50-201ENST00000605814 ESRRAP11474 423 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P50-201ENST00000605814 ADH5P11766 374 aa4.97□□□□□ -1.61
HMGB1P50-201ENST00000605814 AKAP4Q5JQC9 854 aa4.97□□□□□ -1.61
HMGB1P50-201ENST00000605814 C2CD4AQ8NCU7 369 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P50-201ENST00000605814 GTF3C2Q8WUA4 911 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P50-201ENST00000605814 ANKRD7Q92527 254 aa4.97□□□□□ -1.61
HMGB1P50-201ENST00000605814 ZNF830Q96NB3 372 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P50-201ENST00000605814 CORO1BQ9BR76 489 aa4.97□□□□□ -1.61
HMGB1P50-201ENST00000605814 OGFRQ9NZT2 677 aa4.97□□□□□ -1.61
HMGB1P50-201ENST00000605814 PRKAG2Q9UGJ0 569 aa4.97□□□□□ -1.61
HMGB1P50-201ENST00000605814 SHROOM2Q13796 1616 aa4.97□□□□□ -1.61
HMGB1P50-201ENST00000605814 HMGXB3Q12766 1538 aa4.97□□□□□ -1.61
HMGB1P50-201ENST00000605814 UHRF1BP1LA0JNW5 1464 aa4.96□□□□□ -1.62
HMGB1P50-201ENST00000605814 PLEKHH1Q9ULM0 1364 aa4.96□□□□□ -1.62
HMGB1P50-201ENST00000605814 ST20-MTHFSA0A0A6YYL1 179 aa4.96□□□□□ -1.62
HMGB1P50-201ENST00000605814 CCDC66A2RUB6 948 aa4.96□□□□□ -1.62
HMGB1P50-201ENST00000605814 FAM170BA6NMN3 283 aa4.96□□□□□ -1.62
HMGB1P50-201ENST00000605814 BIN1O00499 593 aa4.96□□□□□ -1.62
HMGB1P50-201ENST00000605814 FAM13AO94988 1023 aa4.96□□□□□ -1.62
HMGB1P50-201ENST00000605814 NUCB2P80303 420 aa4.96□□□□□ -1.62
HMGB1P50-201ENST00000605814 PLCL1Q15111 1095 aa4.96□□□□□ -1.62
HMGB1P50-201ENST00000605814 CARD11Q9BXL7 1154 aa4.96□□□□□ -1.62
HMGB1P50-201ENST00000605814 BHLHE41Q9C0J9 482 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P50-201ENST00000605814 YY1AP1Q9H869 796 aa4.96□□□□□ -1.62
HMGB1P50-201ENST00000605814 SPTLC3Q9NUV7 552 aa4.96□□□□□ -1.62
HMGB1P50-201ENST00000605814 FOXD3Q9UJU5 478 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P50-201ENST00000605814 DNMT1P26358 1616 aaKnown RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms