RNA–Protein interactions for RNA: ENST00000602056.1

GTPBP3-227, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 2

Gene GTPBP3, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-227ENST00000602056 TREML2Q5T2D2 321 aa28.55■■■□□ 2.16
GTPBP3-227ENST00000602056 ITPRIPQ8IWB1 547 aa28.55■■■□□ 2.16
GTPBP3-227ENST00000602056 FTSJ3Q8IY81 847 aaKnown RBP28.55■■■□□ 2.16
GTPBP3-227ENST00000602056 SHISA4Q96DD7 197 aa28.55■■■□□ 2.16
GTPBP3-227ENST00000602056 AATFQ9NY61 560 aaKnown RBP eCLIP28.55■■■□□ 2.16
GTPBP3-227ENST00000602056 TLR7Q9NYK1 1049 aaKnown RBP28.55■■■□□ 2.16
GTPBP3-227ENST00000602056 AGTPBP1Q9UPW5 1226 aa28.55■■■□□ 2.16
GTPBP3-227ENST00000602056 CCDC158Q5M9N0 1113 aa28.54■■■□□ 2.16
GTPBP3-227ENST00000602056 NAA16Q6N069 864 aaPredicted RBP28.54■■■□□ 2.16
GTPBP3-227ENST00000602056 ZNF512BQ96KM6 892 aaPredicted RBP28.54■■■□□ 2.16
GTPBP3-227ENST00000602056 DBNLQ9UJU6 430 aaKnown RBP28.54■■■□□ 2.16
GTPBP3-227ENST00000602056 CAP2P40123 477 aa28.53■■■□□ 2.16
GTPBP3-227ENST00000602056 ZAP70P43403 619 aa28.53■■■□□ 2.16
GTPBP3-227ENST00000602056 PPP4CP60510 307 aa28.53■■■□□ 2.16
GTPBP3-227ENST00000602056 SPP2Q13103 211 aa28.53■■■□□ 2.16
GTPBP3-227ENST00000602056 PIH1D3Q9NQM4 214 aaKnown RBP28.53■■■□□ 2.16
GTPBP3-227ENST00000602056 EAF2Q96CJ1 260 aaPredicted RBP28.52■■■□□ 2.16
GTPBP3-227ENST00000602056 DOCK1Q14185 1865 aa28.51■■■□□ 2.15
GTPBP3-227ENST00000602056 ZNF280CQ8ND82 737 aa28.51■■■□□ 2.15
GTPBP3-227ENST00000602056 CCDC8Q9H0W5 538 aaPredicted RBP28.51■■■□□ 2.15
GTPBP3-227ENST00000602056 PHIPQ8WWQ0 1821 aa28.5■■■□□ 2.15
GTPBP3-227ENST00000602056 JAG1P78504 1218 aa28.5■■■□□ 2.15
GTPBP3-227ENST00000602056 SMCR8Q8TEV9 937 aaPredicted RBP28.5■■■□□ 2.15
GTPBP3-227ENST00000602056 TGFBRAP1Q8WUH2 860 aa28.5■■■□□ 2.15
GTPBP3-227ENST00000602056 GCC1Q96CN9 775 aa28.5■■■□□ 2.15
GTPBP3-227ENST00000602056 DNAJC18Q9H819 358 aa28.5■■■□□ 2.15
GTPBP3-227ENST00000602056 PI4KBQ9UBF8 816 aa28.5■■■□□ 2.15
GTPBP3-227ENST00000602056 HERC5Q9UII4 1024 aaKnown RBP28.5■■■□□ 2.15
GTPBP3-227ENST00000602056 BAG3O95817 575 aa28.49■■■□□ 2.15
GTPBP3-227ENST00000602056 CCL5P13501 91 aa28.49■■■□□ 2.15
GTPBP3-227ENST00000602056 HABP4Q5JVS0 413 aaKnown RBP28.49■■■□□ 2.15
GTPBP3-227ENST00000602056 CEP85Q6P2H3 762 aa28.49■■■□□ 2.15
GTPBP3-227ENST00000602056 MAPKAPK5Q8IW41 473 aa28.49■■■□□ 2.15
GTPBP3-227ENST00000602056 ANKRD13CQ8N6S4 541 aa28.49■■■□□ 2.15
GTPBP3-227ENST00000602056 PROCA1Q8NCQ7 364 aaPredicted RBP28.49■■■□□ 2.15
GTPBP3-227ENST00000602056 NOL10Q9BSC4 688 aaKnown RBP28.49■■■□□ 2.15
GTPBP3-227ENST00000602056 FLT1P17948 1338 aa28.48■■■□□ 2.15
GTPBP3-227ENST00000602056 FLT3LGP49771 235 aa28.48■■■□□ 2.15
GTPBP3-227ENST00000602056 HMGCS2P54868 508 aa28.48■■■□□ 2.15
GTPBP3-227ENST00000602056 DHX36Q9H2U1 1008 aaKnown RBP28.48■■■□□ 2.15
GTPBP3-227ENST00000602056 USP17L5A8MUK1 530 aa28.47■■■□□ 2.15
GTPBP3-227ENST00000602056 PLCG2P16885 1265 aa28.47■■■□□ 2.15
GTPBP3-227ENST00000602056 SHROOM1Q2M3G4 852 aaPredicted RBP28.47■■■□□ 2.15
GTPBP3-227ENST00000602056 METTL16Q86W50 562 aaKnown RBP28.47■■■□□ 2.15
GTPBP3-227ENST00000602056 SLAIN1Q8ND83 568 aa28.47■■■□□ 2.15
GTPBP3-227ENST00000602056 PTPRFP10586 1907 aa28.46■■■□□ 2.15
GTPBP3-227ENST00000602056 GJB1P08034 283 aa28.46■■■□□ 2.15
GTPBP3-227ENST00000602056 GJA8P48165 433 aa28.46■■■□□ 2.15
GTPBP3-227ENST00000602056 DYNLL1P63167 89 aaKnown RBP28.46■■■□□ 2.15
GTPBP3-227ENST00000602056 SH3D19Q5HYK7 790 aa28.46■■■□□ 2.15
GTPBP3-227ENST00000602056 DIEXFQ68CQ4 756 aaKnown RBP28.46■■■□□ 2.15
GTPBP3-227ENST00000602056 PANK1Q8TE04 598 aa28.46■■■□□ 2.15
GTPBP3-227ENST00000602056 BIN2Q9UBW5 565 aaPredicted RBP28.46■■■□□ 2.15
GTPBP3-227ENST00000602056 TNPO2O14787 897 aaKnown RBP28.45■■■□□ 2.14
GTPBP3-227ENST00000602056 ADCY3O60266 1144 aa28.45■■■□□ 2.14
GTPBP3-227ENST00000602056 ELNP15502 786 aa28.45■■■□□ 2.14
GTPBP3-227ENST00000602056 UBE2Q1Q7Z7E8 422 aa28.45■■■□□ 2.14
GTPBP3-227ENST00000602056 TBC1D2Q9BYX2 928 aa28.45■■■□□ 2.14
GTPBP3-227ENST00000602056 RNF208Q9H0X6 261 aa28.45■■■□□ 2.14
GTPBP3-227ENST00000602056 UNC93B1Q9H1C4 597 aa28.45■■■□□ 2.14
GTPBP3-227ENST00000602056 PALD1Q9ULE6 856 aa28.45■■■□□ 2.14
GTPBP3-227ENST00000602056 NDUFB9Q9Y6M9 179 aa28.45■■■□□ 2.14
GTPBP3-227ENST00000602056 FAM110CQ1W6H9 321 aa28.44■■■□□ 2.14
GTPBP3-227ENST00000602056 WDR18Q9BV38 432 aa28.44■■■□□ 2.14
GTPBP3-227ENST00000602056 PNMA3Q9UL41 463 aa28.44■■■□□ 2.14
GTPBP3-227ENST00000602056 IGSF3O75054 1194 aa28.43■■■□□ 2.14
GTPBP3-227ENST00000602056 CYP7A1P22680 504 aa28.43■■■□□ 2.14
GTPBP3-227ENST00000602056 UBXN2AP68543 259 aa28.43■■■□□ 2.14
GTPBP3-227ENST00000602056 IRF5Q13568 498 aa28.43■■■□□ 2.14
GTPBP3-227ENST00000602056 ASCC2Q9H1I8 757 aaPredicted RBP28.43■■■□□ 2.14
GTPBP3-227ENST00000602056 ANTXR1Q9H6X2 564 aa28.43■■■□□ 2.14
GTPBP3-227ENST00000602056 PCDH10Q9P2E7 1040 aa28.43■■■□□ 2.14
GTPBP3-227ENST00000602056 SAP30BPQ9UHR5 308 aaKnown RBP28.43■■■□□ 2.14
GTPBP3-227ENST00000602056 EXOC6BQ9Y2D4 811 aa28.43■■■□□ 2.14
GTPBP3-227ENST00000602056 ZBED9Q6R2W3 1325 aa28.43■■■□□ 2.14
GTPBP3-227ENST00000602056 SIPA1L1O43166 1804 aa28.42■■■□□ 2.14
GTPBP3-227ENST00000602056 FOXP4Q8IVH2 680 aaPredicted RBP28.42■■■□□ 2.14
GTPBP3-227ENST00000602056 NKX2-3Q8TAU0 364 aa28.42■■■□□ 2.14
GTPBP3-227ENST00000602056 PXYLP1Q8TE99 480 aa28.42■■■□□ 2.14
GTPBP3-227ENST00000602056 H0YGN5 161 aa28.41■■■□□ 2.14
GTPBP3-227ENST00000602056 IDH1O75874 414 aaKnown RBP28.41■■■□□ 2.14
GTPBP3-227ENST00000602056 INHAP05111 366 aa28.41■■■□□ 2.14
GTPBP3-227ENST00000602056 MTMR2Q13614 643 aa28.41■■■□□ 2.14
GTPBP3-227ENST00000602056 AS3MTQ9HBK9 375 aa28.41■■■□□ 2.14
GTPBP3-227ENST00000602056 MAST2Q6P0Q8 1798 aa28.4■■■□□ 2.14
GTPBP3-227ENST00000602056 GDF11O95390 407 aa28.4■■■□□ 2.14
GTPBP3-227ENST00000602056 BACE1P56817 501 aa28.4■■■□□ 2.14
GTPBP3-227ENST00000602056 MIGA1Q8NAN2 632 aa28.4■■■□□ 2.14
GTPBP3-227ENST00000602056 U2AF1L4Q8WU68 220 aaKnown RBP28.4■■■□□ 2.14
GTPBP3-227ENST00000602056 ASNSP08243 561 aa28.39■■■□□ 2.14
GTPBP3-227ENST00000602056 GCLCP48506 637 aaPredicted RBP28.39■■■□□ 2.14
GTPBP3-227ENST00000602056 COLQQ9Y215 455 aaPredicted RBP28.39■■■□□ 2.14
GTPBP3-227ENST00000602056 PABPC4Q13310 644 aaKnown RBP eCLIP28.38■■■□□ 2.134e-7■■■□□ 17.1
GTPBP3-227ENST00000602056 AACSQ86V21 672 aa28.38■■■□□ 2.13
GTPBP3-227ENST00000602056 CRACR2BQ8N4Y2 399 aaPredicted RBP28.38■■■□□ 2.13
GTPBP3-227ENST00000602056 MAGEB6Q8N7X4 407 aa28.38■■■□□ 2.13
GTPBP3-227ENST00000602056 COA7Q96BR5 231 aa28.38■■■□□ 2.13
GTPBP3-227ENST00000602056 LOC285556D6RIA3 1793 aa28.37■■■□□ 2.13
GTPBP3-227ENST00000602056 PEX10O60683 326 aa28.37■■■□□ 2.13
GTPBP3-227ENST00000602056 GJD2Q9UKL4 321 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms