RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 NEFLP07196 543 aa24.17■■□□□ 1.46
SSBP4-210ENST00000601444 RRP1BQ14684 758 aaKnown RBP24.17■■□□□ 1.46
SSBP4-210ENST00000601444 STRBPQ96SI9 672 aaKnown RBP24.17■■□□□ 1.46
SSBP4-210ENST00000601444 DNAJC18Q9H819 358 aa24.17■■□□□ 1.46
SSBP4-210ENST00000601444 PLCD1P51178 756 aa24.16■■□□□ 1.46
SSBP4-210ENST00000601444 RILPL2Q969X0 211 aa24.16■■□□□ 1.46
SSBP4-210ENST00000601444 OTUD5Q96G74 571 aa24.16■■□□□ 1.46
SSBP4-210ENST00000601444 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.16■■□□□ 1.46
SSBP4-210ENST00000601444 SLC4A4Q9Y6R1 1079 aa24.16■■□□□ 1.46
SSBP4-210ENST00000601444 SIPA1L1O43166 1804 aa24.16■■□□□ 1.46
SSBP4-210ENST00000601444 SPDYE5A6NIY4 337 aa24.15■■□□□ 1.46
SSBP4-210ENST00000601444 FOXN1O15353 648 aa24.15■■□□□ 1.46
SSBP4-210ENST00000601444 ZBTB48P10074 688 aaPredicted RBP24.15■■□□□ 1.46
SSBP4-210ENST00000601444 ZMYM1Q5SVZ6 1142 aa24.15■■□□□ 1.46
SSBP4-210ENST00000601444 METTL16Q86W50 562 aaKnown RBP24.15■■□□□ 1.46
SSBP4-210ENST00000601444 FOXP4Q8IVH2 680 aaPredicted RBP24.15■■□□□ 1.46
SSBP4-210ENST00000601444 MCM9Q9NXL9 1143 aa24.15■■□□□ 1.46
SSBP4-210ENST00000601444 HLA-DOAP06340 250 aa24.14■■□□□ 1.45
SSBP4-210ENST00000601444 CYP2D6P10635 497 aa24.14■■□□□ 1.45
SSBP4-210ENST00000601444 LRRFIP1Q32MZ4 808 aaKnown RBP24.14■■□□□ 1.45
SSBP4-210ENST00000601444 NOL9Q5SY16 702 aaKnown RBP24.14■■□□□ 1.45
SSBP4-210ENST00000601444 SKAP1Q86WV1 359 aa24.14■■□□□ 1.45
SSBP4-210ENST00000601444 ERO1BQ86YB8 467 aa24.14■■□□□ 1.45
SSBP4-210ENST00000601444 HERC5Q9UII4 1024 aaKnown RBP24.14■■□□□ 1.45
SSBP4-210ENST00000601444 SMIM22K7EJ46 135 aa24.13■■□□□ 1.45
SSBP4-210ENST00000601444 GPAA1O43292 621 aa24.13■■□□□ 1.45
SSBP4-210ENST00000601444 POLR3DP05423 398 aaPredicted RBP24.13■■□□□ 1.45
SSBP4-210ENST00000601444 SCYL3Q8IZE3 742 aa24.13■■□□□ 1.45
SSBP4-210ENST00000601444 CRACR2BQ8N4Y2 399 aaPredicted RBP24.13■■□□□ 1.45
SSBP4-210ENST00000601444 ATP8A2Q9NTI2 1148 aa24.13■■□□□ 1.45
SSBP4-210ENST00000601444 TSKSQ9UJT2 592 aa24.13■■□□□ 1.45
SSBP4-210ENST00000601444 CYP2D7A0A087X1C5 515 aa24.12■■□□□ 1.45
SSBP4-210ENST00000601444 IRF6O14896 467 aa24.12■■□□□ 1.45
SSBP4-210ENST00000601444 CTNND1O60716 968 aaKnown RBP24.12■■□□□ 1.45
SSBP4-210ENST00000601444 TM4SF4P48230 202 aa24.12■■□□□ 1.45
SSBP4-210ENST00000601444 JAG1P78504 1218 aa24.12■■□□□ 1.45
SSBP4-210ENST00000601444 SHROOM1Q2M3G4 852 aaPredicted RBP24.12■■□□□ 1.45
SSBP4-210ENST00000601444 CCDC129Q6ZRS4 1044 aa24.12■■□□□ 1.45
SSBP4-210ENST00000601444 CENPQQ7L2Z9 268 aaPredicted RBP24.12■■□□□ 1.45
SSBP4-210ENST00000601444 CCDC84Q86UT8 332 aaPredicted RBP24.12■■□□□ 1.45
SSBP4-210ENST00000601444 MS4A4AQ96JQ5 239 aa24.12■■□□□ 1.45
SSBP4-210ENST00000601444 DDX60LQ5H9U9 1706 aaKnown RBP24.12■■□□□ 1.45
SSBP4-210ENST00000601444 MYH1P12882 1939 aa24.12■■□□□ 1.45
SSBP4-210ENST00000601444 GSG1L2A8MUP6 293 aa24.11■■□□□ 1.45
SSBP4-210ENST00000601444 GSPT1P15170 499 aaKnown RBP24.11■■□□□ 1.45
SSBP4-210ENST00000601444 TTC6Q86TZ1 520 aa24.11■■□□□ 1.45
SSBP4-210ENST00000601444 CCDC136Q96JN2 1154 aa24.11■■□□□ 1.45
SSBP4-210ENST00000601444 FAM227BQ96M60 508 aa24.11■■□□□ 1.45
SSBP4-210ENST00000601444 BEGAINQ9BUH8 593 aa24.11■■□□□ 1.45
SSBP4-210ENST00000601444 TRIM34Q9BYJ4 488 aa24.11■■□□□ 1.45
SSBP4-210ENST00000601444 RNF186Q9NXI6 227 aa24.11■■□□□ 1.45
SSBP4-210ENST00000601444 MANSC4A6NHS7 340 aaPredicted RBP24.1■■□□□ 1.45
SSBP4-210ENST00000601444 USP17L12C9JPN9 530 aa24.1■■□□□ 1.45
SSBP4-210ENST00000601444 USP17L21D6R901 530 aa24.1■■□□□ 1.45
SSBP4-210ENST00000601444 PTPRAP18433 802 aa24.1■■□□□ 1.45
SSBP4-210ENST00000601444 CAP2P40123 477 aa24.1■■□□□ 1.45
SSBP4-210ENST00000601444 PPATQ06203 517 aa24.1■■□□□ 1.45
SSBP4-210ENST00000601444 TTC22Q5TAA0 569 aa24.1■■□□□ 1.45
SSBP4-210ENST00000601444 EHD4Q9H223 541 aa24.1■■□□□ 1.45
SSBP4-210ENST00000601444 SERPINB13Q9UIV8 391 aa24.1■■□□□ 1.45
SSBP4-210ENST00000601444 NAV1Q8NEY1 1877 aa24.1■■□□□ 1.45
SSBP4-210ENST00000601444 A0A0D9SFI3 127 aa24.09■■□□□ 1.45
SSBP4-210ENST00000601444 TRPA1O75762 1119 aa24.09■■□□□ 1.45
SSBP4-210ENST00000601444 SREBF2Q12772 1141 aa24.09■■□□□ 1.45
SSBP4-210ENST00000601444 PPIL2Q13356 520 aa24.09■■□□□ 1.45
SSBP4-210ENST00000601444 CTR9Q6PD62 1173 aa24.09■■□□□ 1.45
SSBP4-210ENST00000601444 REM2Q8IYK8 340 aaPredicted RBP24.09■■□□□ 1.45
SSBP4-210ENST00000601444 PTPN18Q99952 460 aa24.09■■□□□ 1.45
SSBP4-210ENST00000601444 PICK1Q9NRD5 415 aa24.09■■□□□ 1.45
SSBP4-210ENST00000601444 ZHX2Q9Y6X8 837 aa24.09■■□□□ 1.45
SSBP4-210ENST00000601444 GDF11O95390 407 aa24.08■■□□□ 1.45
SSBP4-210ENST00000601444 SDSP20132 328 aa24.08■■□□□ 1.45
SSBP4-210ENST00000601444 NMIQ13287 307 aaPredicted RBP24.08■■□□□ 1.45
SSBP4-210ENST00000601444 DYNLL2Q96FJ2 89 aa24.08■■□□□ 1.45
SSBP4-210ENST00000601444 EPB41L4AQ9HCS5 686 aaPredicted RBP24.08■■□□□ 1.45
SSBP4-210ENST00000601444 TESPA1A2RU30 521 aaPredicted RBP24.07■■□□□ 1.44
SSBP4-210ENST00000601444 IGF2BP3O00425 579 aaKnown RBP eCLIP24.07■■□□□ 1.44
SSBP4-210ENST00000601444 GTF2A2P52657 109 aa24.07■■□□□ 1.44
SSBP4-210ENST00000601444 GABPAQ06546 454 aa24.07■■□□□ 1.44
SSBP4-210ENST00000601444 C12orf60Q5U649 245 aa24.07■■□□□ 1.44
SSBP4-210ENST00000601444 TATDN1Q6P1N9 297 aa24.07■■□□□ 1.44
SSBP4-210ENST00000601444 IFNL1Q8IU54 200 aa24.07■■□□□ 1.44
SSBP4-210ENST00000601444 BRI3BPQ8WY22 251 aa24.07■■□□□ 1.44
SSBP4-210ENST00000601444 CCL15-CCL14A0A0B4J2E2 113 aa24.06■■□□□ 1.44
SSBP4-210ENST00000601444 PATL2C9JE40 543 aaKnown RBP24.06■■□□□ 1.44
SSBP4-210ENST00000601444 APPP05067 770 aa24.06■■□□□ 1.44
SSBP4-210ENST00000601444 HSPA8P11142 646 aaKnown RBP24.06■■□□□ 1.44
SSBP4-210ENST00000601444 SHMT1P34896 483 aa24.06■■□□□ 1.44
SSBP4-210ENST00000601444 INHBEP58166 350 aa24.06■■□□□ 1.44
SSBP4-210ENST00000601444 CCL15Q16663 113 aa24.06■■□□□ 1.44
SSBP4-210ENST00000601444 SLC44A5Q8NCS7 719 aa24.06■■□□□ 1.44
SSBP4-210ENST00000601444 HELLSQ9NRZ9 838 aa24.06■■□□□ 1.44
SSBP4-210ENST00000601444 FOXP2O15409 715 aa24.05■■□□□ 1.44
SSBP4-210ENST00000601444 GNAT2P19087 354 aa24.05■■□□□ 1.44
SSBP4-210ENST00000601444 LBX1P52954 281 aa24.05■■□□□ 1.44
SSBP4-210ENST00000601444 VPS53Q5VIR6 699 aa24.05■■□□□ 1.44
SSBP4-210ENST00000601444 IFNL3Q8IZI9 196 aa24.05■■□□□ 1.44
SSBP4-210ENST00000601444 DDRGK1Q96HY6 314 aa24.05■■□□□ 1.44
SSBP4-210ENST00000601444 KCNH4Q9UQ05 1017 aa24.05■■□□□ 1.44
SSBP4-210ENST00000601444 AFG3L2Q9Y4W6 797 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms