RNA–Protein interactions for RNA: ENST00000598165.5

XRCC1-207, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-207ENST00000598165 DCP1AQ9NPI6 582 aaPredicted RBP16.95■□□□□ 0.3
XRCC1-207ENST00000598165 ATP8A2Q9NTI2 1148 aa16.95■□□□□ 0.3
XRCC1-207ENST00000598165 MCM9Q9NXL9 1143 aa16.95■□□□□ 0.3
XRCC1-207ENST00000598165 POLR3DP05423 398 aaPredicted RBP16.94■□□□□ 0.3
XRCC1-207ENST00000598165 SLC10A3P09131 477 aa16.94■□□□□ 0.3
XRCC1-207ENST00000598165 GNAT2P19087 354 aa16.94■□□□□ 0.3
XRCC1-207ENST00000598165 SLC4A8Q2Y0W8 1093 aa16.94■□□□□ 0.3
XRCC1-207ENST00000598165 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.94■□□□□ 0.3
XRCC1-207ENST00000598165 RASAL3Q86YV0 1011 aa16.94■□□□□ 0.3
XRCC1-207ENST00000598165 FOXP4Q8IVH2 680 aaPredicted RBP16.94■□□□□ 0.3
XRCC1-207ENST00000598165 CRACR2BQ8N4Y2 399 aaPredicted RBP16.94■□□□□ 0.3
XRCC1-207ENST00000598165 TRIM34Q9BYJ4 488 aa16.94■□□□□ 0.3
XRCC1-207ENST00000598165 HELLSQ9NRZ9 838 aa16.94■□□□□ 0.3
XRCC1-207ENST00000598165 HERC5Q9UII4 1024 aaKnown RBP16.94■□□□□ 0.3
XRCC1-207ENST00000598165 ZNF112Q9UJU3 913 aa16.94■□□□□ 0.3
XRCC1-207ENST00000598165 FOCADQ5VW36 1801 aa16.93■□□□□ 0.3
XRCC1-207ENST00000598165 CDK5RAP2Q96SN8 1893 aa16.93■□□□□ 0.3
XRCC1-207ENST00000598165 FAM196BA6NMK8 535 aa16.93■□□□□ 0.3
XRCC1-207ENST00000598165 FAM155AB1AL88 458 aaPredicted RBP16.93■□□□□ 0.3
XRCC1-207ENST00000598165 HIP1O00291 1037 aa16.93■□□□□ 0.3
XRCC1-207ENST00000598165 SLURP2P0DP57 97 aa16.93■□□□□ 0.3
XRCC1-207ENST00000598165 SDSP20132 328 aa16.93■□□□□ 0.3
XRCC1-207ENST00000598165 NOGQ13253 232 aa16.93■□□□□ 0.3
XRCC1-207ENST00000598165 VGLL4Q14135 290 aa16.93■□□□□ 0.3
XRCC1-207ENST00000598165 ZKSCAN4Q969J2 545 aaPredicted RBP16.93■□□□□ 0.3
XRCC1-207ENST00000598165 ELP3Q9H9T3 547 aa16.93■□□□□ 0.3
XRCC1-207ENST00000598165 CCDC85CA6NKD9 419 aa16.92■□□□□ 0.3
XRCC1-207ENST00000598165 PHF20L1A8MW92 1017 aa16.92■□□□□ 0.3
XRCC1-207ENST00000598165 INPP5BP32019 993 aa16.92■□□□□ 0.3
XRCC1-207ENST00000598165 MAP2K2P36507 400 aa16.92■□□□□ 0.3
XRCC1-207ENST00000598165 NMIQ13287 307 aaPredicted RBP16.92■□□□□ 0.3
XRCC1-207ENST00000598165 MCMDC2Q4G0Z9 681 aa16.92■□□□□ 0.3
XRCC1-207ENST00000598165 SKAP1Q86WV1 359 aa16.92■□□□□ 0.3
XRCC1-207ENST00000598165 AMOTL1Q8IY63 956 aa16.92■□□□□ 0.3
XRCC1-207ENST00000598165 FAM227BQ96M60 508 aa16.92■□□□□ 0.3
XRCC1-207ENST00000598165 DIAPH3Q9NSV4 1193 aa16.92■□□□□ 0.3
XRCC1-207ENST00000598165 A0A0D9SFI3 127 aa16.91■□□□□ 0.3
XRCC1-207ENST00000598165 GSG1L2A8MUP6 293 aa16.91■□□□□ 0.3
XRCC1-207ENST00000598165 APPP05067 770 aa16.91■□□□□ 0.3
XRCC1-207ENST00000598165 GIMAP6Q6P9H5 292 aa16.91■□□□□ 0.3
XRCC1-207ENST00000598165 METTL16Q86W50 562 aaKnown RBP16.91■□□□□ 0.3
XRCC1-207ENST00000598165 EHD4Q9H223 541 aa16.91■□□□□ 0.3
XRCC1-207ENST00000598165 SERPINB13Q9UIV8 391 aa16.91■□□□□ 0.3
XRCC1-207ENST00000598165 SNCAIPQ9Y6H5 919 aa16.91■□□□□ 0.3
XRCC1-207ENST00000598165 PATL2C9JE40 543 aaKnown RBP16.9■□□□□ 0.3
XRCC1-207ENST00000598165 CTNND1O60716 968 aaKnown RBP16.9■□□□□ 0.3
XRCC1-207ENST00000598165 ZBTB48P10074 688 aaPredicted RBP16.9■□□□□ 0.3
XRCC1-207ENST00000598165 PLCD1P51178 756 aa16.9■□□□□ 0.3
XRCC1-207ENST00000598165 MKRN3Q13064 507 aaKnown RBP16.9■□□□□ 0.3
XRCC1-207ENST00000598165 NOL9Q5SY16 702 aaKnown RBP16.9■□□□□ 0.3
XRCC1-207ENST00000598165 SPRYD7Q5W111 196 aa16.9■□□□□ 0.3
XRCC1-207ENST00000598165 CCDC129Q6ZRS4 1044 aa16.9■□□□□ 0.3
XRCC1-207ENST00000598165 SCYL3Q8IZE3 742 aa16.9■□□□□ 0.3
XRCC1-207ENST00000598165 OPTNQ96CV9 577 aa16.9■□□□□ 0.3
XRCC1-207ENST00000598165 WNK4Q96J92 1243 aa16.9■□□□□ 0.3
XRCC1-207ENST00000598165 NACAP1Q9BZK3 213 aa16.9■□□□□ 0.3
XRCC1-207ENST00000598165 MYH1P12882 1939 aa16.9■□□□□ 0.3
XRCC1-207ENST00000598165 NAV1Q8NEY1 1877 aa16.89■□□□□ 0.29
XRCC1-207ENST00000598165 SPDYE5A6NIY4 337 aa16.89■□□□□ 0.29
XRCC1-207ENST00000598165 USP17L12C9JPN9 530 aa16.89■□□□□ 0.29
XRCC1-207ENST00000598165 USP17L21D6R901 530 aa16.89■□□□□ 0.29
XRCC1-207ENST00000598165 CYP2D6P10635 497 aa16.89■□□□□ 0.29
XRCC1-207ENST00000598165 TDO2P48775 406 aa16.89■□□□□ 0.29
XRCC1-207ENST00000598165 KIF23Q02241 960 aaPredicted RBP16.89■□□□□ 0.29
XRCC1-207ENST00000598165 CWC27Q6UX04 472 aaKnown RBP16.89■□□□□ 0.29
XRCC1-207ENST00000598165 ERO1BQ86YB8 467 aa16.89■□□□□ 0.29
XRCC1-207ENST00000598165 IFNL3Q8IZI9 196 aa16.89■□□□□ 0.29
XRCC1-207ENST00000598165 ZIC5Q96T25 663 aa16.89■□□□□ 0.29
XRCC1-207ENST00000598165 DNAJC18Q9H819 358 aa16.89■□□□□ 0.29
XRCC1-207ENST00000598165 PICK1Q9NRD5 415 aa16.89■□□□□ 0.29
XRCC1-207ENST00000598165 ARPP21Q9UBL0 812 aaPredicted RBP16.89■□□□□ 0.29
XRCC1-207ENST00000598165 OTOFQ9HC10 1997 aa16.88■□□□□ 0.29
XRCC1-207ENST00000598165 CA12O43570 354 aa16.88■□□□□ 0.29
XRCC1-207ENST00000598165 MFAP1P55081 439 aaKnown RBP16.88■□□□□ 0.29
XRCC1-207ENST00000598165 C12orf60Q5U649 245 aa16.88■□□□□ 0.29
XRCC1-207ENST00000598165 CTR9Q6PD62 1173 aa16.88■□□□□ 0.29
XRCC1-207ENST00000598165 CNKSR2Q8WXI2 1034 aa16.88■□□□□ 0.29
XRCC1-207ENST00000598165 OTUD5Q96G74 571 aa16.88■□□□□ 0.29
XRCC1-207ENST00000598165 EPB41L4AQ9HCS5 686 aaPredicted RBP16.88■□□□□ 0.29
XRCC1-207ENST00000598165 DDX60LQ5H9U9 1706 aaKnown RBP16.87■□□□□ 0.29
XRCC1-207ENST00000598165 CYP2D7A0A087X1C5 515 aa16.87■□□□□ 0.29
XRCC1-207ENST00000598165 SLC34A2O95436 690 aa16.87■□□□□ 0.29
XRCC1-207ENST00000598165 CAP2P40123 477 aa16.87■□□□□ 0.29
XRCC1-207ENST00000598165 PPATQ06203 517 aa16.87■□□□□ 0.29
XRCC1-207ENST00000598165 SBK1Q52WX2 424 aa16.87■□□□□ 0.29
XRCC1-207ENST00000598165 REM2Q8IYK8 340 aaPredicted RBP16.87■□□□□ 0.29
XRCC1-207ENST00000598165 MCOLN1Q9GZU1 580 aa16.87■□□□□ 0.29
XRCC1-207ENST00000598165 NAPBQ9H115 298 aa16.87■□□□□ 0.29
XRCC1-207ENST00000598165 TAOK2Q9UL54 1235 aa16.87■□□□□ 0.29
XRCC1-207ENST00000598165 CCDC171Q6TFL3 1326 aa16.87■□□□□ 0.29
XRCC1-207ENST00000598165 SIPA1L1O43166 1804 aa16.86■□□□□ 0.29
XRCC1-207ENST00000598165 MINDY4BA8MYZ0 360 aa16.86■□□□□ 0.29
XRCC1-207ENST00000598165 GJA5P36382 358 aa16.86■□□□□ 0.29
XRCC1-207ENST00000598165 MLLT1Q03111 559 aaPredicted RBP16.86■□□□□ 0.29
XRCC1-207ENST00000598165 EVX2Q03828 476 aa16.86■□□□□ 0.29
XRCC1-207ENST00000598165 GABPAQ06546 454 aa16.86■□□□□ 0.29
XRCC1-207ENST00000598165 PPIL2Q13356 520 aa16.86■□□□□ 0.29
XRCC1-207ENST00000598165 RRP1BQ14684 758 aaKnown RBP16.86■□□□□ 0.29
XRCC1-207ENST00000598165 BMP2KLQ5H9B9 411 aa16.86■□□□□ 0.29
XRCC1-207ENST00000598165 VPS53Q5VIR6 699 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms