RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 SDR42E1Q8WUS8 393 aa30.95■■■□□ 2.55
TRIM28-204ENST00000594806 RILPL2Q969X0 211 aa30.95■■■□□ 2.55
TRIM28-204ENST00000594806 TRIM34Q9BYJ4 488 aa30.95■■■□□ 2.55
TRIM28-204ENST00000594806 SAP30BPQ9UHR5 308 aaKnown RBP30.95■■■□□ 2.55
TRIM28-204ENST00000594806 SLC4A4Q9Y6R1 1079 aa30.95■■■□□ 2.55
TRIM28-204ENST00000594806 INPP5BP32019 993 aa30.94■■■□□ 2.54
TRIM28-204ENST00000594806 GIMAP6Q6P9H5 292 aa30.94■■■□□ 2.54
TRIM28-204ENST00000594806 ERO1BQ86YB8 467 aa30.94■■■□□ 2.54
TRIM28-204ENST00000594806 CRACR2BQ8N4Y2 399 aaPredicted RBP30.94■■■□□ 2.54
TRIM28-204ENST00000594806 ZKSCAN4Q969J2 545 aaPredicted RBP30.94■■■□□ 2.54
TRIM28-204ENST00000594806 ELP3Q9H9T3 547 aa30.94■■■□□ 2.54
TRIM28-204ENST00000594806 MCM9Q9NXL9 1143 aa30.94■■■□□ 2.54
TRIM28-204ENST00000594806 SNCAIPQ9Y6H5 919 aa30.94■■■□□ 2.54
TRIM28-204ENST00000594806 DDX60LQ5H9U9 1706 aaKnown RBP30.93■■■□□ 2.54
TRIM28-204ENST00000594806 GPAA1O43292 621 aa30.93■■■□□ 2.54
TRIM28-204ENST00000594806 POLR3DP05423 398 aaPredicted RBP30.93■■■□□ 2.54
TRIM28-204ENST00000594806 KIF23Q02241 960 aaPredicted RBP30.93■■■□□ 2.54
TRIM28-204ENST00000594806 TTC22Q5TAA0 569 aa30.93■■■□□ 2.54
TRIM28-204ENST00000594806 HELLSQ9NRZ9 838 aa30.93■■■□□ 2.54
TRIM28-204ENST00000594806 SIPA1L1O43166 1804 aa30.93■■■□□ 2.54
TRIM28-204ENST00000594806 SPDYE5A6NIY4 337 aa30.92■■■□□ 2.54
TRIM28-204ENST00000594806 AMOTL1Q8IY63 956 aa30.92■■■□□ 2.54
TRIM28-204ENST00000594806 OPTNQ96CV9 577 aa30.92■■■□□ 2.54
TRIM28-204ENST00000594806 SERPINB13Q9UIV8 391 aa30.92■■■□□ 2.54
TRIM28-204ENST00000594806 LAMB1P07942 1786 aa30.92■■■□□ 2.54
TRIM28-204ENST00000594806 MANSC4A6NHS7 340 aaPredicted RBP30.91■■■□□ 2.54
TRIM28-204ENST00000594806 HIP1O00291 1037 aa30.91■■■□□ 2.54
TRIM28-204ENST00000594806 PRKAB2O43741 272 aa30.91■■■□□ 2.54
TRIM28-204ENST00000594806 INHBEP58166 350 aa30.91■■■□□ 2.54
TRIM28-204ENST00000594806 PPATQ06203 517 aa30.91■■■□□ 2.54
TRIM28-204ENST00000594806 SCYL3Q8IZE3 742 aa30.91■■■□□ 2.54
TRIM28-204ENST00000594806 WBP1LQ9NX94 342 aa30.91■■■□□ 2.54
TRIM28-204ENST00000594806 M0R2C6 588 aa30.9■■■□□ 2.54
TRIM28-204ENST00000594806 SREBF2Q12772 1141 aa30.9■■■□□ 2.54
TRIM28-204ENST00000594806 BEGAINQ9BUH8 593 aa30.9■■■□□ 2.54
TRIM28-204ENST00000594806 GINM1Q9NU53 330 aa30.9■■■□□ 2.54
TRIM28-204ENST00000594806 PPP4R2Q9NY27 417 aa30.9■■■□□ 2.54
TRIM28-204ENST00000594806 BAZ2AQ9UIF9 1905 aaKnown RBP30.89■■■□□ 2.54
TRIM28-204ENST00000594806 ZIC5Q96T25 663 aa30.89■■■□□ 2.54
TRIM28-204ENST00000594806 PICK1Q9NRD5 415 aa30.89■■■□□ 2.54
TRIM28-204ENST00000594806 PATL2C9JE40 543 aaKnown RBP30.88■■■□□ 2.53
TRIM28-204ENST00000594806 CA12O43570 354 aa30.88■■■□□ 2.53
TRIM28-204ENST00000594806 SDSP20132 328 aa30.88■■■□□ 2.53
TRIM28-204ENST00000594806 TM4SF4P48230 202 aa30.88■■■□□ 2.53
TRIM28-204ENST00000594806 PPIL2Q13356 520 aa30.88■■■□□ 2.53
TRIM28-204ENST00000594806 SEC62Q99442 399 aaKnown RBP30.88■■■□□ 2.53
TRIM28-204ENST00000594806 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.88■■■□□ 2.53
TRIM28-204ENST00000594806 DOCK1Q14185 1865 aa30.88■■■□□ 2.53
TRIM28-204ENST00000594806 GSG1L2A8MUP6 293 aa30.87■■■□□ 2.53
TRIM28-204ENST00000594806 CAP2P40123 477 aa30.87■■■□□ 2.53
TRIM28-204ENST00000594806 MCMDC2Q4G0Z9 681 aa30.87■■■□□ 2.53
TRIM28-204ENST00000594806 NACAP1Q9BZK3 213 aa30.87■■■□□ 2.53
TRIM28-204ENST00000594806 ARPP21Q9UBL0 812 aaPredicted RBP30.87■■■□□ 2.53
TRIM28-204ENST00000594806 FAM196BA6NMK8 535 aa30.86■■■□□ 2.53
TRIM28-204ENST00000594806 GJA5P36382 358 aa30.86■■■□□ 2.53
TRIM28-204ENST00000594806 PLCD1P51178 756 aa30.86■■■□□ 2.53
TRIM28-204ENST00000594806 GTF2A2P52657 109 aa30.86■■■□□ 2.53
TRIM28-204ENST00000594806 OTUD5Q96G74 571 aa30.86■■■□□ 2.53
TRIM28-204ENST00000594806 TBC1D2Q9BYX2 928 aa30.86■■■□□ 2.53
TRIM28-204ENST00000594806 DNAJC18Q9H819 358 aa30.86■■■□□ 2.53
TRIM28-204ENST00000594806 USP17L12C9JPN9 530 aa30.85■■■□□ 2.53
TRIM28-204ENST00000594806 USP17L21D6R901 530 aa30.85■■■□□ 2.53
TRIM28-204ENST00000594806 SLURP2P0DP57 97 aa30.85■■■□□ 2.53
TRIM28-204ENST00000594806 GSPT1P15170 499 aaKnown RBP30.85■■■□□ 2.53
TRIM28-204ENST00000594806 MKRN3Q13064 507 aaKnown RBP30.85■■■□□ 2.53
TRIM28-204ENST00000594806 SBK1Q52WX2 424 aa30.85■■■□□ 2.53
TRIM28-204ENST00000594806 C12orf60Q5U649 245 aa30.85■■■□□ 2.53
TRIM28-204ENST00000594806 TATDN1Q6P1N9 297 aa30.85■■■□□ 2.53
TRIM28-204ENST00000594806 SWAP70Q9UH65 585 aa30.85■■■□□ 2.53
TRIM28-204ENST00000594806 HSPA1AP0DMV8 641 aaKnown RBP30.84■■■□□ 2.53
TRIM28-204ENST00000594806 HSPA1BP0DMV9 641 aaKnown RBP30.84■■■□□ 2.53
TRIM28-204ENST00000594806 PTPRAP18433 802 aa30.84■■■□□ 2.53
TRIM28-204ENST00000594806 MFAP1P55081 439 aaKnown RBP30.84■■■□□ 2.53
TRIM28-204ENST00000594806 GABPAQ06546 454 aa30.84■■■□□ 2.53
TRIM28-204ENST00000594806 SLC4A8Q2Y0W8 1093 aa30.84■■■□□ 2.53
TRIM28-204ENST00000594806 DIAPH3Q9NSV4 1193 aa30.84■■■□□ 2.53
TRIM28-204ENST00000594806 ATAD5Q96QE3 1844 aa30.83■■■□□ 2.53
TRIM28-204ENST00000594806 TESPA1A2RU30 521 aaPredicted RBP30.83■■■□□ 2.53
TRIM28-204ENST00000594806 APPP05067 770 aa30.83■■■□□ 2.53
TRIM28-204ENST00000594806 ASNSP08243 561 aa30.83■■■□□ 2.53
TRIM28-204ENST00000594806 CTR9Q6PD62 1173 aa30.83■■■□□ 2.53
TRIM28-204ENST00000594806 CNKSR2Q8WXI2 1034 aa30.83■■■□□ 2.53
TRIM28-204ENST00000594806 FAM227BQ96M60 508 aa30.83■■■□□ 2.53
TRIM28-204ENST00000594806 NMIQ13287 307 aaPredicted RBP30.82■■■□□ 2.52
TRIM28-204ENST00000594806 SNAPC2Q13487 334 aa30.82■■■□□ 2.52
TRIM28-204ENST00000594806 IFNL3Q8IZI9 196 aa30.82■■■□□ 2.52
TRIM28-204ENST00000594806 SAGE1Q9NXZ1 904 aa30.82■■■□□ 2.52
TRIM28-204ENST00000594806 KCNH4Q9UQ05 1017 aa30.82■■■□□ 2.52
TRIM28-204ENST00000594806 A0A0D9SFI3 127 aa30.81■■■□□ 2.52
TRIM28-204ENST00000594806 CXCL11O14625 94 aa30.81■■■□□ 2.52
TRIM28-204ENST00000594806 IRF6O14896 467 aa30.81■■■□□ 2.52
TRIM28-204ENST00000594806 TDO2P48775 406 aa30.81■■■□□ 2.52
TRIM28-204ENST00000594806 MS4A4AQ96JQ5 239 aa30.81■■■□□ 2.52
TRIM28-204ENST00000594806 ALDH1A1P00352 501 aa30.8■■■□□ 2.52
TRIM28-204ENST00000594806 CETPP11597 493 aa30.8■■■□□ 2.52
TRIM28-204ENST00000594806 OTUD7BQ6GQQ9 843 aa30.8■■■□□ 2.52
TRIM28-204ENST00000594806 ZHX2Q9Y6X8 837 aa30.8■■■□□ 2.52
TRIM28-204ENST00000594806 RRP1BQ14684 758 aaKnown RBP30.79■■■□□ 2.52
TRIM28-204ENST00000594806 CERKLQ49MI3 558 aaPredicted RBP30.79■■■□□ 2.52
TRIM28-204ENST00000594806 EPB41L4AQ9HCS5 686 aaPredicted RBP30.79■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms