RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 FAM196BA6NMK8 535 aa21.54■■□□□ 1.04
RETREG3-210ENST00000590541 ADORA1P30542 326 aa21.54■■□□□ 1.04
RETREG3-210ENST00000590541 GCLCP48506 637 aaPredicted RBP21.54■■□□□ 1.04
RETREG3-210ENST00000590541 SPP2Q13103 211 aa21.54■■□□□ 1.04
RETREG3-210ENST00000590541 CCDC102BQ68D86 513 aa21.54■■□□□ 1.04
RETREG3-210ENST00000590541 TDHQ8IZJ6 230 aa21.54■■□□□ 1.04
RETREG3-210ENST00000590541 MTMR10Q9NXD2 777 aa21.54■■□□□ 1.04
RETREG3-210ENST00000590541 OGDHLQ9ULD0 1010 aa21.54■■□□□ 1.04
RETREG3-210ENST00000590541 RHBDL3P58872 404 aa21.53■■□□□ 1.04
RETREG3-210ENST00000590541 RASGRF1Q13972 1273 aa21.53■■□□□ 1.04
RETREG3-210ENST00000590541 SSH1Q8WYL5 1049 aa21.53■■□□□ 1.04
RETREG3-210ENST00000590541 OSBPL5Q9H0X9 879 aaPredicted RBP21.53■■□□□ 1.04
RETREG3-210ENST00000590541 ABCF2Q9UG63 623 aa21.53■■□□□ 1.04
RETREG3-210ENST00000590541 MROH7-TTC4A0A0A0MT08 1334 aa21.53■■□□□ 1.04
RETREG3-210ENST00000590541 PLXNB2O15031 1838 aa21.52■■□□□ 1.04
RETREG3-210ENST00000590541 HMGCS2P54868 508 aa21.52■■□□□ 1.04
RETREG3-210ENST00000590541 SLF2Q8IX21 1173 aa21.52■■□□□ 1.04
RETREG3-210ENST00000590541 ZNF280CQ8ND82 737 aa21.52■■□□□ 1.04
RETREG3-210ENST00000590541 TRIB2Q92519 343 aa21.52■■□□□ 1.04
RETREG3-210ENST00000590541 ASCC2Q9H1I8 757 aaPredicted RBP21.52■■□□□ 1.04
RETREG3-210ENST00000590541 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.52■■□□□ 1.04
RETREG3-210ENST00000590541 PDS5AQ29RF7 1337 aaKnown RBP21.52■■□□□ 1.03
RETREG3-210ENST00000590541 GPR75-ASB3A0A0A6YYF3 556 aa21.51■■□□□ 1.03
RETREG3-210ENST00000590541 IL15P40933 162 aaPredicted RBP21.51■■□□□ 1.03
RETREG3-210ENST00000590541 RRP1BQ14684 758 aaKnown RBP21.51■■□□□ 1.03
RETREG3-210ENST00000590541 ZNF384Q8TF68 577 aa21.51■■□□□ 1.03
RETREG3-210ENST00000590541 PA2G4Q9UQ80 394 aaKnown RBP21.51■■□□□ 1.03
RETREG3-210ENST00000590541 PFASO15067 1338 aa21.51■■□□□ 1.03
RETREG3-210ENST00000590541 NPM3O75607 178 aaKnown RBP21.5■■□□□ 1.03
RETREG3-210ENST00000590541 PABPC4Q13310 644 aaKnown RBP eCLIP21.5■■□□□ 1.03
RETREG3-210ENST00000590541 MAP3K21Q5TCX8 1036 aa21.5■■□□□ 1.03
RETREG3-210ENST00000590541 CUL9Q8IWT3 2517 aa21.5■■□□□ 1.03
RETREG3-210ENST00000590541 MECOMQ03112 1051 aa21.49■■□□□ 1.03
RETREG3-210ENST00000590541 SH3D19Q5HYK7 790 aa21.49■■□□□ 1.03
RETREG3-210ENST00000590541 TBC1D2Q9BYX2 928 aa21.49■■□□□ 1.03
RETREG3-210ENST00000590541 UBE2OQ9C0C9 1292 aaKnown RBP21.49■■□□□ 1.03
RETREG3-210ENST00000590541 MORF4L1Q9UBU8 362 aa21.49■■□□□ 1.03
RETREG3-210ENST00000590541 UBTFL1P0CB47 393 aaPredicted RBP21.48■■□□□ 1.03
RETREG3-210ENST00000590541 CYP2B6P20813 491 aa21.48■■□□□ 1.03
RETREG3-210ENST00000590541 CAP2P40123 477 aa21.48■■□□□ 1.03
RETREG3-210ENST00000590541 TIMM10P62072 90 aa21.48■■□□□ 1.03
RETREG3-210ENST00000590541 SLFN5Q08AF3 891 aa21.48■■□□□ 1.03
RETREG3-210ENST00000590541 SPTY2D1Q68D10 685 aaPredicted RBP21.48■■□□□ 1.03
RETREG3-210ENST00000590541 ATAD5Q96QE3 1844 aa21.48■■□□□ 1.03
RETREG3-210ENST00000590541 COL2A1P02458 1487 aaPredicted RBP21.47■■□□□ 1.03
RETREG3-210ENST00000590541 COL6A1P12109 1028 aa21.47■■□□□ 1.03
RETREG3-210ENST00000590541 PRKAR2AP13861 404 aaKnown RBP21.47■■□□□ 1.03
RETREG3-210ENST00000590541 USP17L5A8MUK1 530 aa21.46■■□□□ 1.03
RETREG3-210ENST00000590541 PEX10O60683 326 aa21.46■■□□□ 1.03
RETREG3-210ENST00000590541 ERICH6Q7L0X2 663 aa21.46■■□□□ 1.03
RETREG3-210ENST00000590541 COL25A1Q9BXS0 654 aaPredicted RBP21.46■■□□□ 1.03
RETREG3-210ENST00000590541 COPRSQ9NQ92 184 aa21.46■■□□□ 1.03
RETREG3-210ENST00000590541 UNC80Q8N2C7 3258 aa21.45■■□□□ 1.02
RETREG3-210ENST00000590541 A0A1B0GUL7 405 aa21.44■■□□□ 1.02
RETREG3-210ENST00000590541 CT47B1P0C2W7 299 aaPredicted RBP21.44■■□□□ 1.02
RETREG3-210ENST00000590541 XRCC5P13010 732 aaKnown RBP21.44■■□□□ 1.02
RETREG3-210ENST00000590541 NSUN4Q96CB9 384 aaKnown RBP21.44■■□□□ 1.02
RETREG3-210ENST00000590541 XAGE2Q96GT9 111 aa21.44■■□□□ 1.02
RETREG3-210ENST00000590541 P2RX7Q99572 595 aaKnown RBP21.44■■□□□ 1.02
RETREG3-210ENST00000590541 NUDT12Q9BQG2 462 aa21.44■■□□□ 1.02
RETREG3-210ENST00000590541 AS3MTQ9HBK9 375 aa21.44■■□□□ 1.02
RETREG3-210ENST00000590541 TXNRD2Q9NNW7 524 aa21.44■■□□□ 1.02
RETREG3-210ENST00000590541 MAP4K4O95819 1239 aaPredicted RBP21.43■■□□□ 1.02
RETREG3-210ENST00000590541 HOXA7P31268 230 aaPredicted RBP21.43■■□□□ 1.02
RETREG3-210ENST00000590541 IRX3P78415 501 aaPredicted RBP21.43■■□□□ 1.02
RETREG3-210ENST00000590541 CACNB2Q08289 660 aaPredicted RBP21.43■■□□□ 1.02
RETREG3-210ENST00000590541 MTMR2Q13614 643 aa21.43■■□□□ 1.02
RETREG3-210ENST00000590541 LRRC26Q2I0M4 334 aa21.43■■□□□ 1.02
RETREG3-210ENST00000590541 ALDH1L2Q3SY69 923 aa21.43■■□□□ 1.02
RETREG3-210ENST00000590541 LHX8Q68G74 356 aa21.43■■□□□ 1.02
RETREG3-210ENST00000590541 WDR18Q9BV38 432 aa21.43■■□□□ 1.02
RETREG3-210ENST00000590541 BACE1P56817 501 aa21.42■■□□□ 1.02
RETREG3-210ENST00000590541 PI16Q6UXB8 463 aa21.42■■□□□ 1.02
RETREG3-210ENST00000590541 TRMT2AQ8IZ69 625 aaKnown RBP21.42■■□□□ 1.02
RETREG3-210ENST00000590541 SOCS4Q8WXH5 440 aa21.42■■□□□ 1.02
RETREG3-210ENST00000590541 USP6NLQ92738 828 aa21.42■■□□□ 1.02
RETREG3-210ENST00000590541 HMG20BQ9P0W2 317 aa21.42■■□□□ 1.02
RETREG3-210ENST00000590541 HERC5Q9UII4 1024 aaKnown RBP21.42■■□□□ 1.02
RETREG3-210ENST00000590541 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.42■■□□□ 1.02
RETREG3-210ENST00000590541 POTEB2H3BUK9 544 aa21.41■■□□□ 1.02
RETREG3-210ENST00000590541 LDHCP07864 332 aa21.41■■□□□ 1.02
RETREG3-210ENST00000590541 CCND3P30281 292 aaPredicted RBP21.41■■□□□ 1.02
RETREG3-210ENST00000590541 HERVK_113P62684 666 aa21.41■■□□□ 1.02
RETREG3-210ENST00000590541 JAG1P78504 1218 aa21.41■■□□□ 1.02
RETREG3-210ENST00000590541 MDM2Q00987 491 aaPredicted RBP21.41■■□□□ 1.02
RETREG3-210ENST00000590541 MVPQ14764 893 aaKnown RBP21.41■■□□□ 1.02
RETREG3-210ENST00000590541 Q3C1V9 767 aa21.41■■□□□ 1.02
RETREG3-210ENST00000590541 TBC1D9Q6ZT07 1266 aa21.41■■□□□ 1.02
RETREG3-210ENST00000590541 GPRC5AQ8NFJ5 357 aa21.41■■□□□ 1.02
RETREG3-210ENST00000590541 RBPJLQ9UBG7 517 aa21.41■■□□□ 1.02
RETREG3-210ENST00000590541 SIPA1L1O43166 1804 aa21.41■■□□□ 1.02
RETREG3-210ENST00000590541 ZKSCAN1P17029 563 aaPredicted RBP21.4■■□□□ 1.02
RETREG3-210ENST00000590541 GSTO1P78417 241 aa21.4■■□□□ 1.02
RETREG3-210ENST00000590541 TFCP2Q12800 502 aa21.4■■□□□ 1.02
RETREG3-210ENST00000590541 CCL14Q16627 93 aa21.4■■□□□ 1.02
RETREG3-210ENST00000590541 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.4■■□□□ 1.02
RETREG3-210ENST00000590541 TRMT44Q8IYL2 757 aaKnown RBP21.4■■□□□ 1.02
RETREG3-210ENST00000590541 GUCD1Q96NT3 240 aa21.4■■□□□ 1.02
RETREG3-210ENST00000590541 MAPK4P31152 587 aa21.39■■□□□ 1.01
RETREG3-210ENST00000590541 MORN1Q5T089 497 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms