RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 PANK1Q8TE04 598 aa14.95□□□□□ -0.02
VAT1-206ENST00000589709 CCDC8Q9H0W5 538 aaPredicted RBP14.95□□□□□ -0.02
VAT1-206ENST00000589709 AATFQ9NY61 560 aaKnown RBP eCLIP14.95□□□□□ -0.02
VAT1-206ENST00000589709 RBBP6Q7Z6E9 1792 aaKnown RBP14.94□□□□□ -0.02
VAT1-206ENST00000589709 TRIM75PA6NK02 468 aa14.94□□□□□ -0.02
VAT1-206ENST00000589709 FAM196BA6NMK8 535 aa14.94□□□□□ -0.02
VAT1-206ENST00000589709 EN2P19622 333 aaPredicted RBP14.94□□□□□ -0.02
VAT1-206ENST00000589709 OSBPP22059 807 aa14.94□□□□□ -0.02
VAT1-206ENST00000589709 HSP90AB4PQ58FF6 505 aa14.94□□□□□ -0.02
VAT1-206ENST00000589709 GADL1Q6ZQY3 521 aa14.94□□□□□ -0.02
VAT1-206ENST00000589709 ADGRA1Q86SQ6 560 aa14.94□□□□□ -0.02
VAT1-206ENST00000589709 METTL16Q86W50 562 aaKnown RBP14.94□□□□□ -0.02
VAT1-206ENST00000589709 PIH1D3Q9NQM4 214 aaKnown RBP14.94□□□□□ -0.02
VAT1-206ENST00000589709 TLR7Q9NYK1 1049 aaKnown RBP14.94□□□□□ -0.02
VAT1-206ENST00000589709 AGTPBP1Q9UPW5 1226 aa14.94□□□□□ -0.02
VAT1-206ENST00000589709 FCGRTP55899 365 aa14.93□□□□□ -0.02
VAT1-206ENST00000589709 SPP2Q13103 211 aa14.93□□□□□ -0.02
VAT1-206ENST00000589709 CERS3Q8IU89 383 aa14.93□□□□□ -0.02
VAT1-206ENST00000589709 PROCA1Q8NCQ7 364 aaPredicted RBP14.93□□□□□ -0.02
VAT1-206ENST00000589709 ZNF280CQ8ND82 737 aa14.93□□□□□ -0.02
VAT1-206ENST00000589709 SH3TC2Q8TF17 1288 aa14.93□□□□□ -0.02
VAT1-206ENST00000589709 TGFBRAP1Q8WUH2 860 aa14.93□□□□□ -0.02
VAT1-206ENST00000589709 DOCK1Q14185 1865 aa14.93□□□□□ -0.02
VAT1-206ENST00000589709 USP17L5A8MUK1 530 aa14.92□□□□□ -0.02
VAT1-206ENST00000589709 RRP1BQ14684 758 aaKnown RBP14.92□□□□□ -0.02
VAT1-206ENST00000589709 SLC4A8Q2Y0W8 1093 aa14.92□□□□□ -0.02
VAT1-206ENST00000589709 CCDC84Q86UT8 332 aaPredicted RBP14.92□□□□□ -0.02
VAT1-206ENST00000589709 RPAP2Q8IXW5 612 aaPredicted RBP14.92□□□□□ -0.02
VAT1-206ENST00000589709 WDR18Q9BV38 432 aa14.92□□□□□ -0.02
VAT1-206ENST00000589709 GINM1Q9NU53 330 aa14.92□□□□□ -0.02
VAT1-206ENST00000589709 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.92□□□□□ -0.02
VAT1-206ENST00000589709 EXOC6BQ9Y2D4 811 aa14.92□□□□□ -0.02
VAT1-206ENST00000589709 FLT1P17948 1338 aa14.92□□□□□ -0.02
VAT1-206ENST00000589709 MYPNQ86TC9 1320 aa14.92□□□□□ -0.02
VAT1-206ENST00000589709 CYP7A1P22680 504 aa14.91□□□□□ -0.02
VAT1-206ENST00000589709 GRK4P32298 578 aa14.91□□□□□ -0.02
VAT1-206ENST00000589709 SH3D19Q5HYK7 790 aa14.91□□□□□ -0.02
VAT1-206ENST00000589709 AACSQ86V21 672 aa14.91□□□□□ -0.02
VAT1-206ENST00000589709 MAPKAPK5Q8IW41 473 aa14.91□□□□□ -0.02
VAT1-206ENST00000589709 RAET1EQ8TD07 263 aa14.91□□□□□ -0.02
VAT1-206ENST00000589709 SMCR8Q8TEV9 937 aaPredicted RBP14.91□□□□□ -0.02
VAT1-206ENST00000589709 AS3MTQ9HBK9 375 aa14.91□□□□□ -0.02
VAT1-206ENST00000589709 ZBTB40Q9NUA8 1239 aa14.91□□□□□ -0.02
VAT1-206ENST00000589709 PNMA3Q9UL41 463 aa14.91□□□□□ -0.02
VAT1-206ENST00000589709 DDX19BQ9UMR2 479 aa14.91□□□□□ -0.02
VAT1-206ENST00000589709 PHIPQ8WWQ0 1821 aa14.91□□□□□ -0.02
VAT1-206ENST00000589709 CENPFP49454 3210 aa14.91□□□□□ -0.02
VAT1-206ENST00000589709 ZSWIM8A7E2V4 1837 aa14.9□□□□□ -0.02
VAT1-206ENST00000589709 IDH1O75874 414 aaKnown RBP14.9□□□□□ -0.02
VAT1-206ENST00000589709 ASNSP08243 561 aa14.9□□□□□ -0.02
VAT1-206ENST00000589709 MAP3K12Q12852 859 aa14.9□□□□□ -0.02
VAT1-206ENST00000589709 PABPC4Q13310 644 aaKnown RBP eCLIP14.9□□□□□ -0.026e-8■■■■□ 26.7
VAT1-206ENST00000589709 TREML2Q5T2D2 321 aa14.9□□□□□ -0.02
VAT1-206ENST00000589709 RHPN1Q8TCX5 695 aa14.9□□□□□ -0.02
VAT1-206ENST00000589709 CHMP4BQ9H444 224 aaKnown RBP14.9□□□□□ -0.02
VAT1-206ENST00000589709 MAST2Q6P0Q8 1798 aa14.9□□□□□ -0.02
VAT1-206ENST00000589709 PTPRFP10586 1907 aa14.9□□□□□ -0.02
VAT1-206ENST00000589709 HMMRO75330 724 aa14.89□□□□□ -0.03
VAT1-206ENST00000589709 ECM2O94769 699 aaPredicted RBP14.89□□□□□ -0.03
VAT1-206ENST00000589709 GCLCP48506 637 aaPredicted RBP14.89□□□□□ -0.03
VAT1-206ENST00000589709 DYNLL1P63167 89 aaKnown RBP14.89□□□□□ -0.03
VAT1-206ENST00000589709 PRKCZQ05513 592 aa14.89□□□□□ -0.03
VAT1-206ENST00000589709 CRACR2BQ8N4Y2 399 aaPredicted RBP14.89□□□□□ -0.03
VAT1-206ENST00000589709 DNAJC18Q9H819 358 aa14.89□□□□□ -0.03
VAT1-206ENST00000589709 PALD1Q9ULE6 856 aa14.89□□□□□ -0.03
VAT1-206ENST00000589709 HLA-DOAP06340 250 aa14.88□□□□□ -0.03
VAT1-206ENST00000589709 HMGCS2P54868 508 aa14.88□□□□□ -0.03
VAT1-206ENST00000589709 BACE1P56817 501 aa14.88□□□□□ -0.03
VAT1-206ENST00000589709 IRF5Q13568 498 aa14.88□□□□□ -0.03
VAT1-206ENST00000589709 FAM110CQ1W6H9 321 aa14.88□□□□□ -0.03
VAT1-206ENST00000589709 CLASRPQ8N2M8 674 aaKnown RBP14.88□□□□□ -0.03
VAT1-206ENST00000589709 MAGEB6Q8N7X4 407 aa14.88□□□□□ -0.03
VAT1-206ENST00000589709 SLAIN1Q8ND83 568 aa14.88□□□□□ -0.03
VAT1-206ENST00000589709 NKX2-3Q8TAU0 364 aa14.88□□□□□ -0.03
VAT1-206ENST00000589709 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.88□□□□□ -0.03
VAT1-206ENST00000589709 KIF1BPQ96EK5 621 aa14.88□□□□□ -0.03
VAT1-206ENST00000589709 TRIM34Q9BYJ4 488 aa14.88□□□□□ -0.03
VAT1-206ENST00000589709 ANTXR1Q9H6X2 564 aa14.88□□□□□ -0.03
VAT1-206ENST00000589709 IL1RAPL2Q9NP60 686 aa14.88□□□□□ -0.03
VAT1-206ENST00000589709 COG6Q9Y2V7 657 aa14.88□□□□□ -0.03
VAT1-206ENST00000589709 C19orf81C9J6K1 198 aa14.87□□□□□ -0.03
VAT1-206ENST00000589709 TNPO2O14787 897 aaKnown RBP14.87□□□□□ -0.03
VAT1-206ENST00000589709 RAB11FIP3O75154 756 aa14.87□□□□□ -0.03
VAT1-206ENST00000589709 MYCP01106 439 aaPredicted RBP14.87□□□□□ -0.03
VAT1-206ENST00000589709 GJB1P08034 283 aa14.87□□□□□ -0.03
VAT1-206ENST00000589709 FLT3LGP49771 235 aa14.87□□□□□ -0.03
VAT1-206ENST00000589709 UBXN2AP68543 259 aa14.87□□□□□ -0.03
VAT1-206ENST00000589709 JAG1P78504 1218 aa14.87□□□□□ -0.03
VAT1-206ENST00000589709 TTF1Q15361 905 aaPredicted RBP14.87□□□□□ -0.03
VAT1-206ENST00000589709 MTFR1Q15390 333 aa14.87□□□□□ -0.03
VAT1-206ENST00000589709 SIRT2Q8IXJ6 389 aa14.87□□□□□ -0.03
VAT1-206ENST00000589709 ANKRD13CQ8N6S4 541 aa14.87□□□□□ -0.03
VAT1-206ENST00000589709 PXYLP1Q8TE99 480 aa14.87□□□□□ -0.03
VAT1-206ENST00000589709 GCC1Q96CN9 775 aa14.87□□□□□ -0.03
VAT1-206ENST00000589709 EHD4Q9H223 541 aa14.87□□□□□ -0.03
VAT1-206ENST00000589709 RCAN3Q9UKA8 241 aa14.87□□□□□ -0.03
VAT1-206ENST00000589709 GABRQQ9UN88 632 aa14.87□□□□□ -0.03
VAT1-206ENST00000589709 NDUFB9Q9Y6M9 179 aa14.87□□□□□ -0.03
VAT1-206ENST00000589709 HOXA7P31268 230 aaPredicted RBP14.86□□□□□ -0.03
VAT1-206ENST00000589709 USP5P45974 858 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 219.2 ms