RNA–Protein interactions for RNA: ENST00000581662.1

CDK5RAP3-221, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 557 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-221ENST00000581662 DDX60LQ5H9U9 1706 aaKnown RBP10.24□□□□□ -0.77
CDK5RAP3-221ENST00000581662 SPDYE5A6NIY4 337 aa10.23□□□□□ -0.77
CDK5RAP3-221ENST00000581662 GDF9O60383 454 aa10.23□□□□□ -0.77
CDK5RAP3-221ENST00000581662 DGAT1O75907 488 aa10.23□□□□□ -0.77
CDK5RAP3-221ENST00000581662 CETPP11597 493 aa10.23□□□□□ -0.77
CDK5RAP3-221ENST00000581662 MYL6BP14649 208 aa10.23□□□□□ -0.77
CDK5RAP3-221ENST00000581662 TMEM31Q5JXX7 168 aa10.23□□□□□ -0.77
CDK5RAP3-221ENST00000581662 MTMR14Q8NCE2 650 aa10.23□□□□□ -0.77
CDK5RAP3-221ENST00000581662 NECAB3Q96P71 396 aaPredicted RBP10.23□□□□□ -0.77
CDK5RAP3-221ENST00000581662 POLR3GLQ9BT43 218 aa10.23□□□□□ -0.77
CDK5RAP3-221ENST00000581662 REPIN1Q9BWE0 567 aaKnown RBP10.23□□□□□ -0.77
CDK5RAP3-221ENST00000581662 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.23□□□□□ -0.77
CDK5RAP3-221ENST00000581662 EPHX3Q9H6B9 360 aa10.23□□□□□ -0.77
CDK5RAP3-221ENST00000581662 COL6A1P12109 1028 aa10.22□□□□□ -0.77
CDK5RAP3-221ENST00000581662 FCGRTP55899 365 aa10.22□□□□□ -0.77
CDK5RAP3-221ENST00000581662 RPS8P62241 208 aaKnown RBP10.22□□□□□ -0.77
CDK5RAP3-221ENST00000581662 MRPS5P82675 430 aaKnown RBP10.22□□□□□ -0.77
CDK5RAP3-221ENST00000581662 IRF5Q13568 498 aa10.22□□□□□ -0.77
CDK5RAP3-221ENST00000581662 STRIP1Q5VSL9 837 aa10.22□□□□□ -0.77
CDK5RAP3-221ENST00000581662 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.22□□□□□ -0.77
CDK5RAP3-221ENST00000581662 RSPH6AQ9H0K4 717 aa10.22□□□□□ -0.77
CDK5RAP3-221ENST00000581662 TRMT112Q9UI30 125 aaKnown RBP10.22□□□□□ -0.77
CDK5RAP3-221ENST00000581662 BCRP11274 1271 aa10.21□□□□□ -0.77
CDK5RAP3-221ENST00000581662 FLT3LGP49771 235 aa10.21□□□□□ -0.77
CDK5RAP3-221ENST00000581662 ANKIB1Q9P2G1 1089 aa10.21□□□□□ -0.77
CDK5RAP3-221ENST00000581662 AOX1Q06278 1338 aa10.21□□□□□ -0.78
CDK5RAP3-221ENST00000581662 DIAPH1O60610 1272 aaKnown RBP10.2□□□□□ -0.78
CDK5RAP3-221ENST00000581662 GPR37L1O60883 481 aa10.2□□□□□ -0.78
CDK5RAP3-221ENST00000581662 MMP16P51512 607 aa10.2□□□□□ -0.78
CDK5RAP3-221ENST00000581662 GRIN2CQ14957 1233 aa10.2□□□□□ -0.78
CDK5RAP3-221ENST00000581662 SHHQ15465 462 aa10.2□□□□□ -0.78
CDK5RAP3-221ENST00000581662 LRRC26Q2I0M4 334 aa10.2□□□□□ -0.78
CDK5RAP3-221ENST00000581662 MCM10Q7L590 875 aa10.2□□□□□ -0.78
CDK5RAP3-221ENST00000581662 KIAA0825Q8IV33 1275 aa10.2□□□□□ -0.78
CDK5RAP3-221ENST00000581662 PKD2L1Q9P0L9 805 aa10.2□□□□□ -0.78
CDK5RAP3-221ENST00000581662 OGDHLQ9ULD0 1010 aa10.2□□□□□ -0.78
CDK5RAP3-221ENST00000581662 MED23Q9ULK4 1368 aa10.2□□□□□ -0.78
CDK5RAP3-221ENST00000581662 PCDHAC2Q9Y5I4 1007 aa10.2□□□□□ -0.78
CDK5RAP3-221ENST00000581662 XIRP2A4UGR9 3374 aa10.2□□□□□ -0.78
CDK5RAP3-221ENST00000581662 XDHP47989 1333 aa10.19□□□□□ -0.78
CDK5RAP3-221ENST00000581662 SNAPC2Q13487 334 aa10.19□□□□□ -0.78
CDK5RAP3-221ENST00000581662 RASA3Q14644 834 aa10.19□□□□□ -0.78
CDK5RAP3-221ENST00000581662 HSP90AB3PQ58FF7 597 aa10.19□□□□□ -0.78
CDK5RAP3-221ENST00000581662 C9orf50Q5SZB4 431 aa10.19□□□□□ -0.78
CDK5RAP3-221ENST00000581662 ANKRD23Q86SG2 305 aa10.19□□□□□ -0.78
CDK5RAP3-221ENST00000581662 CYP4X1Q8N118 509 aa10.19□□□□□ -0.78
CDK5RAP3-221ENST00000581662 SNCAIPQ9Y6H5 919 aa10.19□□□□□ -0.78
CDK5RAP3-221ENST00000581662 ZDBF2Q9HCK1 2354 aa10.18□□□□□ -0.78
CDK5RAP3-221ENST00000581662 CLRN2A0PK11 232 aa10.18□□□□□ -0.78
CDK5RAP3-221ENST00000581662 DXOO77932 396 aaKnown RBP10.18□□□□□ -0.78
CDK5RAP3-221ENST00000581662 FDX1P10109 184 aa10.18□□□□□ -0.78
CDK5RAP3-221ENST00000581662 FOXK2Q01167 660 aa10.18□□□□□ -0.78
CDK5RAP3-221ENST00000581662 NHLH1Q02575 133 aa10.18□□□□□ -0.78
CDK5RAP3-221ENST00000581662 DLGAP5Q15398 846 aa10.18□□□□□ -0.78
CDK5RAP3-221ENST00000581662 AMHR2Q16671 573 aa10.18□□□□□ -0.78
CDK5RAP3-221ENST00000581662 ZNF787Q6DD87 383 aa10.18□□□□□ -0.78
CDK5RAP3-221ENST00000581662 TEPSINQ96N21 525 aa10.18□□□□□ -0.78
CDK5RAP3-221ENST00000581662 BMP1P13497 986 aa10.17□□□□□ -0.78
CDK5RAP3-221ENST00000581662 ATP2B4P23634 1241 aa10.17□□□□□ -0.78
CDK5RAP3-221ENST00000581662 CC2D1BQ5T0F9 858 aaKnown RBP10.17□□□□□ -0.78
CDK5RAP3-221ENST00000581662 AKNAD1Q5T1N1 836 aa10.17□□□□□ -0.78
CDK5RAP3-221ENST00000581662 ERO1BQ86YB8 467 aa10.17□□□□□ -0.78
CDK5RAP3-221ENST00000581662 LBHD1Q9BQE6 289 aaPredicted RBP10.17□□□□□ -0.78
CDK5RAP3-221ENST00000581662 KNSTRNQ9Y448 316 aa10.17□□□□□ -0.78
CDK5RAP3-221ENST00000581662 LTBP2Q14767 1821 aa10.17□□□□□ -0.78
CDK5RAP3-221ENST00000581662 ECM29Q5VYK3 1845 aa10.17□□□□□ -0.78
CDK5RAP3-221ENST00000581662 PDHXO00330 501 aa10.16□□□□□ -0.78
CDK5RAP3-221ENST00000581662 EIF4A1P60842 406 aaKnown RBP10.16□□□□□ -0.78
CDK5RAP3-221ENST00000581662 PPIL2Q13356 520 aa10.16□□□□□ -0.78
CDK5RAP3-221ENST00000581662 MOGSQ13724 837 aa10.16□□□□□ -0.78
CDK5RAP3-221ENST00000581662 SPIRE2Q8WWL2 714 aa10.16□□□□□ -0.78
CDK5RAP3-221ENST00000581662 THUMPD2Q9BTF0 503 aaKnown RBP10.16□□□□□ -0.78
CDK5RAP3-221ENST00000581662 SEC31BQ9NQW1 1179 aa10.16□□□□□ -0.78
CDK5RAP3-221ENST00000581662 MIS18AQ9NYP9 233 aa10.16□□□□□ -0.78
CDK5RAP3-221ENST00000581662 CSADQ9Y600 493 aa10.16□□□□□ -0.78
CDK5RAP3-221ENST00000581662 MAST2Q6P0Q8 1798 aa10.16□□□□□ -0.78
CDK5RAP3-221ENST00000581662 TTC24A2A3L6 582 aaPredicted RBP10.15□□□□□ -0.78
CDK5RAP3-221ENST00000581662 TRIM32Q13049 653 aa10.15□□□□□ -0.78
CDK5RAP3-221ENST00000581662 DCTN1Q14203 1278 aa10.15□□□□□ -0.78
CDK5RAP3-221ENST00000581662 PROSER3Q2NL68 480 aa10.15□□□□□ -0.78
CDK5RAP3-221ENST00000581662 RETREG3Q86VR2 466 aa10.15□□□□□ -0.78
CDK5RAP3-221ENST00000581662 IL27Q8NEV9 243 aa10.15□□□□□ -0.78
CDK5RAP3-221ENST00000581662 PRMT6Q96LA8 375 aaPredicted RBP10.15□□□□□ -0.78
CDK5RAP3-221ENST00000581662 COA1Q9GZY4 146 aa10.15□□□□□ -0.78
CDK5RAP3-221ENST00000581662 VEZTQ9HBM0 779 aa10.15□□□□□ -0.78
CDK5RAP3-221ENST00000581662 A0A1B0GUL6 1792 aa10.15□□□□□ -0.78
CDK5RAP3-221ENST00000581662 PKD1L2Q7Z442 2459 aa10.15□□□□□ -0.78
CDK5RAP3-221ENST00000581662 MGAMO43451 1857 aa10.15□□□□□ -0.79
CDK5RAP3-221ENST00000581662 CACNA1GO43497 2377 aa10.14□□□□□ -0.79
CDK5RAP3-221ENST00000581662 FAM86C2PA6NEL3 165 aa10.14□□□□□ -0.79
CDK5RAP3-221ENST00000581662 HMGCRP04035 888 aa10.14□□□□□ -0.79
CDK5RAP3-221ENST00000581662 JUNDP17535 347 aa10.14□□□□□ -0.79
CDK5RAP3-221ENST00000581662 NDUFV2P19404 249 aa10.14□□□□□ -0.79
CDK5RAP3-221ENST00000581662 PRKAR2BP31323 418 aa10.14□□□□□ -0.79
CDK5RAP3-221ENST00000581662 TAF7Q15545 349 aaPredicted RBP10.14□□□□□ -0.79
CDK5RAP3-221ENST00000581662 TTLL5Q6EMB2 1281 aa10.14□□□□□ -0.79
CDK5RAP3-221ENST00000581662 TXNRD3Q86VQ6 643 aa10.14□□□□□ -0.79
CDK5RAP3-221ENST00000581662 CERS5Q8N5B7 392 aa10.14□□□□□ -0.79
CDK5RAP3-221ENST00000581662 ZBTB38Q8NAP3 1195 aaPredicted RBP10.14□□□□□ -0.79
CDK5RAP3-221ENST00000581662 ZNF428Q96B54 188 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms