RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 CEMIPQ8WUJ3 1361 aa8.65□□□□□ -1.02
TVP23C-208ENST00000581273 TESPA1A2RU30 521 aaPredicted RBP8.65□□□□□ -1.02
TVP23C-208ENST00000581273 KLRG2A4D1S0 409 aaPredicted RBP8.65□□□□□ -1.02
TVP23C-208ENST00000581273 EFCAB8A8MWE9 144 aa8.65□□□□□ -1.02
TVP23C-208ENST00000581273 MYO1CO00159 1063 aa8.65□□□□□ -1.02
TVP23C-208ENST00000581273 APPP05067 770 aa8.65□□□□□ -1.02
TVP23C-208ENST00000581273 GNAI3P08754 354 aa8.65□□□□□ -1.02
TVP23C-208ENST00000581273 CHMLP26374 656 aa8.65□□□□□ -1.02
TVP23C-208ENST00000581273 MAGEA9P43362 315 aa8.65□□□□□ -1.02
TVP23C-208ENST00000581273 TUBB2AQ13885 445 aa8.65□□□□□ -1.02
TVP23C-208ENST00000581273 ATL3Q6DD88 541 aa8.65□□□□□ -1.02
TVP23C-208ENST00000581273 KRBA2Q6ZNG9 492 aa8.65□□□□□ -1.02
TVP23C-208ENST00000581273 FCHSD1Q86WN1 690 aa8.65□□□□□ -1.02
TVP23C-208ENST00000581273 CEP120Q8N960 986 aa8.65□□□□□ -1.02
TVP23C-208ENST00000581273 CCDC191Q8NCU4 936 aa8.65□□□□□ -1.02
TVP23C-208ENST00000581273 DDX11Q96FC9 970 aa8.65□□□□□ -1.02
TVP23C-208ENST00000581273 PSMD1Q99460 953 aa8.65□□□□□ -1.02
TVP23C-208ENST00000581273 TUBB2BQ9BVA1 445 aa8.65□□□□□ -1.02
TVP23C-208ENST00000581273 UTP14AQ9BVJ6 771 aaKnown RBP8.65□□□□□ -1.02
TVP23C-208ENST00000581273 LRRCC1Q9C099 1032 aa8.65□□□□□ -1.02
TVP23C-208ENST00000581273 GDPD2Q9HCC8 539 aa8.65□□□□□ -1.02
TVP23C-208ENST00000581273 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.65□□□□□ -1.02
TVP23C-208ENST00000581273 RBBP6Q7Z6E9 1792 aaKnown RBP8.65□□□□□ -1.02
TVP23C-208ENST00000581273 COL4A5P29400 1685 aa8.65□□□□□ -1.03
TVP23C-208ENST00000581273 ABCC12Q96J65 1359 aa8.64□□□□□ -1.03
TVP23C-208ENST00000581273 MYO1BO43795 1136 aa8.64□□□□□ -1.03
TVP23C-208ENST00000581273 DHX16O60231 1041 aaKnown RBP8.64□□□□□ -1.03
TVP23C-208ENST00000581273 SMARCA5O60264 1052 aaPredicted RBP8.64□□□□□ -1.03
TVP23C-208ENST00000581273 RAB11FIP3O75154 756 aa8.64□□□□□ -1.03
TVP23C-208ENST00000581273 RPS6KA5O75582 802 aa8.64□□□□□ -1.03
TVP23C-208ENST00000581273 TBC1D8O95759 1140 aa8.64□□□□□ -1.03
TVP23C-208ENST00000581273 MYL6BP14649 208 aa8.64□□□□□ -1.03
TVP23C-208ENST00000581273 NOP2P46087 812 aaKnown RBP8.64□□□□□ -1.03
TVP23C-208ENST00000581273 TPRNQ4KMQ1 711 aa8.64□□□□□ -1.03
TVP23C-208ENST00000581273 ANO6Q4KMQ2 910 aa8.64□□□□□ -1.03
TVP23C-208ENST00000581273 VPS53Q5VIR6 699 aa8.64□□□□□ -1.03
TVP23C-208ENST00000581273 DLK2Q6UY11 383 aa8.64□□□□□ -1.03
TVP23C-208ENST00000581273 KIF6Q6ZMV9 814 aa8.64□□□□□ -1.03
TVP23C-208ENST00000581273 Q7L0L9 218 aa8.64□□□□□ -1.03
TVP23C-208ENST00000581273 NIM1KQ8IY84 436 aa8.64□□□□□ -1.03
TVP23C-208ENST00000581273 GPR161Q8N6U8 529 aaKnown RBP8.64□□□□□ -1.03
TVP23C-208ENST00000581273 CACTINQ8WUQ7 758 aaKnown RBP8.64□□□□□ -1.03
TVP23C-208ENST00000581273 NYXQ9GZU5 481 aa8.64□□□□□ -1.03
TVP23C-208ENST00000581273 OSBPL5Q9H0X9 879 aaPredicted RBP8.64□□□□□ -1.03
TVP23C-208ENST00000581273 EMILIN3Q9NT22 766 aa8.64□□□□□ -1.03
TVP23C-208ENST00000581273 ANO10Q9NW15 660 aa8.64□□□□□ -1.03
TVP23C-208ENST00000581273 BCCIPQ9P287 314 aaKnown RBP eCLIP8.64□□□□□ -1.03
TVP23C-208ENST00000581273 DNAI1Q9UI46 699 aa8.64□□□□□ -1.03
TVP23C-208ENST00000581273 CFAP45Q9UL16 551 aa8.64□□□□□ -1.03
TVP23C-208ENST00000581273 FHOD1Q9Y613 1164 aa8.64□□□□□ -1.03
TVP23C-208ENST00000581273 TTC41PQ6P2S7 1318 aa8.63□□□□□ -1.03
TVP23C-208ENST00000581273 DLG5Q8TDM6 1919 aa8.63□□□□□ -1.03
TVP23C-208ENST00000581273 CCDC69A6NI79 296 aa8.63□□□□□ -1.03
TVP23C-208ENST00000581273 PPEF1O14829 653 aaPredicted RBP8.63□□□□□ -1.03
TVP23C-208ENST00000581273 ZSCAN12O43309 604 aa8.63□□□□□ -1.03
TVP23C-208ENST00000581273 PPIP5K2O43314 1243 aa8.63□□□□□ -1.03
TVP23C-208ENST00000581273 ERLIN1O75477 346 aa8.63□□□□□ -1.03
TVP23C-208ENST00000581273 ZRANB2O95218 330 aaKnown RBP eCLIP8.63□□□□□ -1.03
TVP23C-208ENST00000581273 GNAI2P04899 355 aa8.63□□□□□ -1.03
TVP23C-208ENST00000581273 PSMA5P28066 241 aa8.63□□□□□ -1.03
TVP23C-208ENST00000581273 ACTN2P35609 894 aa8.63□□□□□ -1.03
TVP23C-208ENST00000581273 SCNN1DP51172 638 aa8.63□□□□□ -1.03
TVP23C-208ENST00000581273 LRRFIP1Q32MZ4 808 aaKnown RBP8.63□□□□□ -1.03
TVP23C-208ENST00000581273 ARHGAP29Q52LW3 1261 aa8.63□□□□□ -1.03
TVP23C-208ENST00000581273 RGMBQ6NW40 437 aa8.63□□□□□ -1.03
TVP23C-208ENST00000581273 TTLL7Q6ZT98 887 aa8.63□□□□□ -1.03
TVP23C-208ENST00000581273 SRLQ86TD4 932 aa8.63□□□□□ -1.03
TVP23C-208ENST00000581273 SUGP1Q8IWZ8 645 aaKnown RBP8.63□□□□□ -1.03
TVP23C-208ENST00000581273 PLPP6Q8IY26 295 aa8.63□□□□□ -1.03
TVP23C-208ENST00000581273 CEP57L1Q8IYX8 460 aa8.63□□□□□ -1.03
TVP23C-208ENST00000581273 ERCC4Q92889 916 aaPredicted RBP8.63□□□□□ -1.03
TVP23C-208ENST00000581273 RBM17Q96I25 401 aaKnown RBP8.63□□□□□ -1.03
TVP23C-208ENST00000581273 GBP3Q9H0R5 595 aa8.63□□□□□ -1.03
TVP23C-208ENST00000581273 TMX4Q9H1E5 349 aaPredicted RBP8.63□□□□□ -1.03
TVP23C-208ENST00000581273 ZBTB3Q9H5J0 574 aa8.63□□□□□ -1.03
TVP23C-208ENST00000581273 ARFGAP3Q9NP61 516 aa8.63□□□□□ -1.03
TVP23C-208ENST00000581273 MTMR6Q9Y217 621 aa8.63□□□□□ -1.03
TVP23C-208ENST00000581273 STXBP5LQ9Y2K9 1186 aa8.63□□□□□ -1.03
TVP23C-208ENST00000581273 MUC3AQ02505 3323 aa8.62□□□□□ -1.03
TVP23C-208ENST00000581273 TAF1P21675 1872 aa8.62□□□□□ -1.03
TVP23C-208ENST00000581273 HIP1O00291 1037 aa8.62□□□□□ -1.03
TVP23C-208ENST00000581273 SEMA3EO15041 775 aa8.62□□□□□ -1.03
TVP23C-208ENST00000581273 CASTP20810 708 aaKnown RBP8.62□□□□□ -1.03
TVP23C-208ENST00000581273 SETQ01105 290 aaPredicted RBP8.62□□□□□ -1.03
TVP23C-208ENST00000581273 BRD3Q15059 726 aa8.62□□□□□ -1.03
TVP23C-208ENST00000581273 TAF7Q15545 349 aaPredicted RBP8.62□□□□□ -1.03
TVP23C-208ENST00000581273 AOC3Q16853 763 aa8.62□□□□□ -1.03
TVP23C-208ENST00000581273 HSP90AB4PQ58FF6 505 aa8.62□□□□□ -1.03
TVP23C-208ENST00000581273 SWT1Q5T5J6 900 aaKnown RBP8.62□□□□□ -1.03
TVP23C-208ENST00000581273 SUSD4Q5VX71 490 aa8.62□□□□□ -1.03
TVP23C-208ENST00000581273 CC2D2BQ6DHV5 1058 aa8.62□□□□□ -1.03
TVP23C-208ENST00000581273 C3orf67Q6ZVT6 689 aa8.62□□□□□ -1.03
TVP23C-208ENST00000581273 USP50Q70EL3 339 aaPredicted RBP8.62□□□□□ -1.03
TVP23C-208ENST00000581273 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.62□□□□□ -1.03
TVP23C-208ENST00000581273 LUZP1Q86V48 1076 aa8.62□□□□□ -1.03
TVP23C-208ENST00000581273 DEFB123Q8N688 67 aa8.62□□□□□ -1.03
TVP23C-208ENST00000581273 SPATA32Q96LK8 384 aa8.62□□□□□ -1.03
TVP23C-208ENST00000581273 TTC14Q96N46 770 aa8.62□□□□□ -1.03
TVP23C-208ENST00000581273 MPHOSPH8Q99549 860 aa8.62□□□□□ -1.03
TVP23C-208ENST00000581273 CHMP4AQ9BY43 222 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 145.9 ms