RNA–Protein interactions for RNA: ENST00000579618.1

SNRPD1-203, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 5 BASIC

Gene SNRPD1, Length 320 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-203ENST00000579618 RPTORQ8N122 1335 aa12.55□□□□□ -0.4
SNRPD1-203ENST00000579618 DOCK2Q92608 1830 aa12.55□□□□□ -0.4
SNRPD1-203ENST00000579618 COL2A1P02458 1487 aaPredicted RBP12.54□□□□□ -0.4
SNRPD1-203ENST00000579618 IRF5Q13568 498 aa12.54□□□□□ -0.4
SNRPD1-203ENST00000579618 APOBEC3HQ6NTF7 200 aaKnown RBP12.54□□□□□ -0.4
SNRPD1-203ENST00000579618 HOOK2Q96ED9 719 aa12.54□□□□□ -0.4
SNRPD1-203ENST00000579618 UBE2OQ9C0C9 1292 aaKnown RBP12.54□□□□□ -0.4
SNRPD1-203ENST00000579618 PHIPQ8WWQ0 1821 aa12.53□□□□□ -0.4
SNRPD1-203ENST00000579618 PDE8BO95263 885 aa12.53□□□□□ -0.4
SNRPD1-203ENST00000579618 HDLBPQ00341 1268 aaKnown RBP12.53□□□□□ -0.4
SNRPD1-203ENST00000579618 UBE4AQ14139 1066 aa12.53□□□□□ -0.4
SNRPD1-203ENST00000579618 LRRC24Q50LG9 513 aa12.53□□□□□ -0.4
SNRPD1-203ENST00000579618 METTL24Q5JXM2 366 aa12.53□□□□□ -0.4
SNRPD1-203ENST00000579618 ZDHHC15Q96MV8 337 aa12.53□□□□□ -0.4
SNRPD1-203ENST00000579618 FAM161BQ96MY7 647 aa12.53□□□□□ -0.4
SNRPD1-203ENST00000579618 ZNF112Q9UJU3 913 aa12.53□□□□□ -0.4
SNRPD1-203ENST00000579618 CAPN2P17655 700 aa12.52□□□□□ -0.41
SNRPD1-203ENST00000579618 NOL9Q5SY16 702 aaKnown RBP12.52□□□□□ -0.41
SNRPD1-203ENST00000579618 FKBP1CQ5VVH2 108 aa12.52□□□□□ -0.41
SNRPD1-203ENST00000579618 ANKLE1Q8NAG6 615 aa12.52□□□□□ -0.41
SNRPD1-203ENST00000579618 PUS3Q9BZE2 481 aaKnown RBP12.52□□□□□ -0.41
SNRPD1-203ENST00000579618 PRDM6Q9NQX0 595 aa12.52□□□□□ -0.41
SNRPD1-203ENST00000579618 DOCK1Q14185 1865 aa12.52□□□□□ -0.41
SNRPD1-203ENST00000579618 AK9Q5TCS8 1911 aa12.52□□□□□ -0.41
SNRPD1-203ENST00000579618 MYH13Q9UKX3 1938 aa12.52□□□□□ -0.41
SNRPD1-203ENST00000579618 LAMA2P24043 3122 aaKnown RBP12.52□□□□□ -0.41
SNRPD1-203ENST00000579618 PRUNE2Q8WUY3 3088 aa12.51□□□□□ -0.41
SNRPD1-203ENST00000579618 PLXNB2O15031 1838 aa12.51□□□□□ -0.41
SNRPD1-203ENST00000579618 A0A0G2JLL6 359 aaPredicted RBP12.51□□□□□ -0.41
SNRPD1-203ENST00000579618 APBB1O00213 710 aa12.51□□□□□ -0.41
SNRPD1-203ENST00000579618 TCP10Q12799 353 aa12.51□□□□□ -0.41
SNRPD1-203ENST00000579618 TFCP2Q12800 502 aa12.51□□□□□ -0.41
SNRPD1-203ENST00000579618 TRIM32Q13049 653 aa12.51□□□□□ -0.41
SNRPD1-203ENST00000579618 PUM3Q15397 648 aaKnown RBP12.51□□□□□ -0.41
SNRPD1-203ENST00000579618 GADL1Q6ZQY3 521 aa12.51□□□□□ -0.41
SNRPD1-203ENST00000579618 PRRT2Q7Z6L0 340 aaPredicted RBP12.51□□□□□ -0.41
SNRPD1-203ENST00000579618 VGLL2Q8N8G2 317 aa12.51□□□□□ -0.41
SNRPD1-203ENST00000579618 GPATCH3Q96I76 525 aa12.51□□□□□ -0.41
SNRPD1-203ENST00000579618 NBPF3Q9H094 633 aa12.51□□□□□ -0.41
SNRPD1-203ENST00000579618 C11orf49Q9H6J7 331 aa12.51□□□□□ -0.41
SNRPD1-203ENST00000579618 PFASO15067 1338 aa12.51□□□□□ -0.41
SNRPD1-203ENST00000579618 IFIT2P09913 472 aaKnown RBP12.5□□□□□ -0.41
SNRPD1-203ENST00000579618 TNNI3KQ59H18 835 aa12.5□□□□□ -0.41
SNRPD1-203ENST00000579618 FBXO33Q7Z6M2 555 aa12.5□□□□□ -0.41
SNRPD1-203ENST00000579618 FAM151AQ8WW52 585 aa12.5□□□□□ -0.41
SNRPD1-203ENST00000579618 LNPKQ9C0E8 428 aa12.5□□□□□ -0.41
SNRPD1-203ENST00000579618 FPGT-TNNI3KV9GXZ4 949 aa12.5□□□□□ -0.41
SNRPD1-203ENST00000579618 MAST2Q6P0Q8 1798 aa12.5□□□□□ -0.41
SNRPD1-203ENST00000579618 DOCK3Q8IZD9 2030 aa12.49□□□□□ -0.41
SNRPD1-203ENST00000579618 POTEB2H3BUK9 544 aa12.49□□□□□ -0.41
SNRPD1-203ENST00000579618 CXCL11O14625 94 aa12.49□□□□□ -0.41
SNRPD1-203ENST00000579618 HMGCRP04035 888 aa12.49□□□□□ -0.41
SNRPD1-203ENST00000579618 IFIT1P09914 478 aaKnown RBP12.49□□□□□ -0.41
SNRPD1-203ENST00000579618 SLC5A1P13866 664 aa12.49□□□□□ -0.41
SNRPD1-203ENST00000579618 MDM2Q00987 491 aaPredicted RBP12.49□□□□□ -0.41
SNRPD1-203ENST00000579618 NFIAQ12857 509 aa12.49□□□□□ -0.41
SNRPD1-203ENST00000579618 ATP2B3Q16720 1220 aa12.49□□□□□ -0.41
SNRPD1-203ENST00000579618 POTEDQ86YR6 584 aa12.49□□□□□ -0.41
SNRPD1-203ENST00000579618 ANKRD13CQ8N6S4 541 aa12.49□□□□□ -0.41
SNRPD1-203ENST00000579618 TBC1D22AQ8WUA7 517 aa12.49□□□□□ -0.41
SNRPD1-203ENST00000579618 LPIN2Q92539 896 aa12.49□□□□□ -0.41
SNRPD1-203ENST00000579618 IL1RAPL2Q9NP60 686 aa12.49□□□□□ -0.41
SNRPD1-203ENST00000579618 FRMPD3Q5JV73 1810 aa12.48□□□□□ -0.41
SNRPD1-203ENST00000579618 LOC285556D6RIA3 1793 aa12.48□□□□□ -0.41
SNRPD1-203ENST00000579618 ATRNL1Q5VV63 1379 aa12.48□□□□□ -0.41
SNRPD1-203ENST00000579618 TTC41PQ6P2S7 1318 aa12.48□□□□□ -0.41
SNRPD1-203ENST00000579618 A0A1B0GUL7 405 aa12.48□□□□□ -0.41
SNRPD1-203ENST00000579618 SMARCA5O60264 1052 aaPredicted RBP12.48□□□□□ -0.41
SNRPD1-203ENST00000579618 FRAT2O75474 233 aaPredicted RBP12.48□□□□□ -0.41
SNRPD1-203ENST00000579618 FGFR2P21802 821 aa12.48□□□□□ -0.41
SNRPD1-203ENST00000579618 AACSQ86V21 672 aa12.48□□□□□ -0.41
SNRPD1-203ENST00000579618 VPS37DQ86XT2 251 aa12.48□□□□□ -0.41
SNRPD1-203ENST00000579618 SMCR8Q8TEV9 937 aaPredicted RBP12.48□□□□□ -0.41
SNRPD1-203ENST00000579618 COA7Q96BR5 231 aa12.48□□□□□ -0.41
SNRPD1-203ENST00000579618 OSBPL3Q9H4L5 887 aa12.48□□□□□ -0.41
SNRPD1-203ENST00000579618 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.48□□□□□ -0.41
SNRPD1-203ENST00000579618 FAM198AQ9UFP1 575 aa12.48□□□□□ -0.41
SNRPD1-203ENST00000579618 ZHX2Q9Y6X8 837 aa12.48□□□□□ -0.41
SNRPD1-203ENST00000579618 MAST3O60307 1309 aa12.47□□□□□ -0.41
SNRPD1-203ENST00000579618 LTBP2Q14767 1821 aa12.47□□□□□ -0.41
SNRPD1-203ENST00000579618 SLURP2P0DP57 97 aa12.47□□□□□ -0.41
SNRPD1-203ENST00000579618 PTPRAP18433 802 aa12.47□□□□□ -0.41
SNRPD1-203ENST00000579618 FAM109BQ6ICB4 259 aaPredicted RBP12.47□□□□□ -0.41
SNRPD1-203ENST00000579618 CDC42EP5Q6NZY7 148 aa12.47□□□□□ -0.41
SNRPD1-203ENST00000579618 HHIPL2Q6UWX4 724 aa12.47□□□□□ -0.41
SNRPD1-203ENST00000579618 FASTKD5Q7L8L6 764 aaKnown RBP12.47□□□□□ -0.41
SNRPD1-203ENST00000579618 SCYL3Q8IZE3 742 aa12.47□□□□□ -0.41
SNRPD1-203ENST00000579618 EAF2Q96CJ1 260 aaPredicted RBP12.47□□□□□ -0.41
SNRPD1-203ENST00000579618 MRIQ9BWK5 157 aa12.47□□□□□ -0.41
SNRPD1-203ENST00000579618 HMX1Q9NP08 348 aaPredicted RBP12.47□□□□□ -0.41
SNRPD1-203ENST00000579618 OGDHLQ9ULD0 1010 aa12.47□□□□□ -0.41
SNRPD1-203ENST00000579618 AFG3L2Q9Y4W6 797 aa12.47□□□□□ -0.41
SNRPD1-203ENST00000579618 SALL3Q9BXA9 1300 aa12.46□□□□□ -0.41
SNRPD1-203ENST00000579618 PHF20L1A8MW92 1017 aa12.46□□□□□ -0.41
SNRPD1-203ENST00000579618 ERC2O15083 957 aa12.46□□□□□ -0.41
SNRPD1-203ENST00000579618 ZBTB22O15209 634 aa12.46□□□□□ -0.41
SNRPD1-203ENST00000579618 MX1P20591 662 aa12.46□□□□□ -0.41
SNRPD1-203ENST00000579618 LRRC26Q2I0M4 334 aa12.46□□□□□ -0.41
SNRPD1-203ENST00000579618 CCDC158Q5M9N0 1113 aa12.46□□□□□ -0.41
SNRPD1-203ENST00000579618 GORABQ5T7V8 394 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms