RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 ATN1P54259 1190 aaPredicted RBP7.38□□□□□ -1.23
SMG6-219ENST00000575663 HMGCS2P54868 508 aa7.38□□□□□ -1.23
SMG6-219ENST00000575663 RTP1P59025 263 aa7.38□□□□□ -1.23
SMG6-219ENST00000575663 MAP3K12Q12852 859 aa7.38□□□□□ -1.23
SMG6-219ENST00000575663 PICALMQ13492 652 aa7.38□□□□□ -1.23
SMG6-219ENST00000575663 SHHQ15465 462 aa7.38□□□□□ -1.23
SMG6-219ENST00000575663 LHX8Q68G74 356 aa7.38□□□□□ -1.23
SMG6-219ENST00000575663 SLF2Q8IX21 1173 aa7.38□□□□□ -1.23
SMG6-219ENST00000575663 ZGPATQ8N5A5 531 aaKnown RBP7.38□□□□□ -1.23
SMG6-219ENST00000575663 GPRC5AQ8NFJ5 357 aa7.38□□□□□ -1.23
SMG6-219ENST00000575663 GTF3C2Q8WUA4 911 aaPredicted RBP7.38□□□□□ -1.23
SMG6-219ENST00000575663 ATXN2LQ8WWM7 1075 aaKnown RBP7.38□□□□□ -1.23
SMG6-219ENST00000575663 OSBPL5Q9H0X9 879 aaPredicted RBP7.38□□□□□ -1.23
SMG6-219ENST00000575663 ASCC2Q9H1I8 757 aaPredicted RBP7.38□□□□□ -1.23
SMG6-219ENST00000575663 GNL3LQ9NVN8 582 aaKnown RBP7.38□□□□□ -1.23
SMG6-219ENST00000575663 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.38□□□□□ -1.23
SMG6-219ENST00000575663 THEGQ9P2T0 379 aa7.38□□□□□ -1.23
SMG6-219ENST00000575663 ATP11BQ9Y2G3 1177 aa7.38□□□□□ -1.23
SMG6-219ENST00000575663 ALDH1L1O75891 902 aa7.37□□□□□ -1.23
SMG6-219ENST00000575663 MAP3K10Q02779 954 aa7.37□□□□□ -1.23
SMG6-219ENST00000575663 SPP2Q13103 211 aa7.37□□□□□ -1.23
SMG6-219ENST00000575663 LRRC24Q50LG9 513 aa7.37□□□□□ -1.23
SMG6-219ENST00000575663 C9orf50Q5SZB4 431 aa7.37□□□□□ -1.23
SMG6-219ENST00000575663 MFSD14CQ5VZR4 134 aa7.37□□□□□ -1.23
SMG6-219ENST00000575663 CCDC84Q86UT8 332 aaPredicted RBP7.37□□□□□ -1.23
SMG6-219ENST00000575663 DZIP1Q86YF9 867 aaKnown RBP7.37□□□□□ -1.23
SMG6-219ENST00000575663 ZFPM1Q8IX07 1006 aa7.37□□□□□ -1.23
SMG6-219ENST00000575663 VGLL2Q8N8G2 317 aa7.37□□□□□ -1.23
SMG6-219ENST00000575663 ADAMTS19Q8TE59 1207 aa7.37□□□□□ -1.23
SMG6-219ENST00000575663 LPAR1Q92633 364 aa7.37□□□□□ -1.23
SMG6-219ENST00000575663 SUCLG2Q96I99 432 aa7.37□□□□□ -1.23
SMG6-219ENST00000575663 RNPC3Q96LT9 517 aaKnown RBP7.37□□□□□ -1.23
SMG6-219ENST00000575663 UHRF1Q96T88 793 aaPredicted RBP7.37□□□□□ -1.23
SMG6-219ENST00000575663 GAS2L1Q99501 681 aaPredicted RBP7.37□□□□□ -1.23
SMG6-219ENST00000575663 C1QTNF1Q9BXJ1 281 aa7.37□□□□□ -1.23
SMG6-219ENST00000575663 SRCIN1Q9C0H9 1055 aa7.37□□□□□ -1.23
SMG6-219ENST00000575663 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.37□□□□□ -1.23
SMG6-219ENST00000575663 TMOD4Q9NZQ9 345 aa7.37□□□□□ -1.23
SMG6-219ENST00000575663 DDX20Q9UHI6 824 aaKnown RBP7.37□□□□□ -1.23
SMG6-219ENST00000575663 HCN4Q9Y3Q4 1203 aa7.37□□□□□ -1.23
SMG6-219ENST00000575663 MAST2Q6P0Q8 1798 aa7.37□□□□□ -1.23
SMG6-219ENST00000575663 LAMA2P24043 3122 aaKnown RBP7.37□□□□□ -1.23
SMG6-219ENST00000575663 DOCK1Q14185 1865 aa7.36□□□□□ -1.23
SMG6-219ENST00000575663 DOCK2Q92608 1830 aa7.36□□□□□ -1.23
SMG6-219ENST00000575663 UTYO14607 1347 aa7.36□□□□□ -1.23
SMG6-219ENST00000575663 GAKO14976 1311 aa7.36□□□□□ -1.23
SMG6-219ENST00000575663 SALL1Q9NSC2 1324 aa7.36□□□□□ -1.23
SMG6-219ENST00000575663 DDTLA6NHG4 134 aaPredicted RBP7.36□□□□□ -1.23
SMG6-219ENST00000575663 USP17L5A8MUK1 530 aa7.36□□□□□ -1.23
SMG6-219ENST00000575663 KBTBD13C9JR72 458 aa7.36□□□□□ -1.23
SMG6-219ENST00000575663 TBC1D12O60347 775 aa7.36□□□□□ -1.23
SMG6-219ENST00000575663 GLRX3O76003 335 aaKnown RBP7.36□□□□□ -1.23
SMG6-219ENST00000575663 CNGA1P29973 690 aa7.36□□□□□ -1.23
SMG6-219ENST00000575663 HERVK_113P62684 666 aa7.36□□□□□ -1.23
SMG6-219ENST00000575663 ERVK-9P63128 1117 aa7.36□□□□□ -1.23
SMG6-219ENST00000575663 ERVK-24P63145 666 aa7.36□□□□□ -1.23
SMG6-219ENST00000575663 RABL6Q3YEC7 729 aaPredicted RBP7.36□□□□□ -1.23
SMG6-219ENST00000575663 SH3D19Q5HYK7 790 aa7.36□□□□□ -1.23
SMG6-219ENST00000575663 SLC4A10Q6U841 1118 aa7.36□□□□□ -1.23
SMG6-219ENST00000575663 SH3BP5LQ7L8J4 393 aa7.36□□□□□ -1.23
SMG6-219ENST00000575663 GPR142Q7Z601 462 aa7.36□□□□□ -1.23
SMG6-219ENST00000575663 PLEKHH3Q7Z736 793 aa7.36□□□□□ -1.23
SMG6-219ENST00000575663 USP38Q8NB14 1042 aa7.36□□□□□ -1.23
SMG6-219ENST00000575663 LPIN2Q92539 896 aa7.36□□□□□ -1.23
SMG6-219ENST00000575663 BADQ92934 168 aa7.36□□□□□ -1.23
SMG6-219ENST00000575663 BICC1Q9H694 974 aaKnown RBP7.36□□□□□ -1.23
SMG6-219ENST00000575663 DENND2AQ9ULE3 1009 aa7.36□□□□□ -1.23
SMG6-219ENST00000575663 LOC285556D6RIA3 1793 aa7.36□□□□□ -1.23
SMG6-219ENST00000575663 IL16Q14005 1332 aa7.35□□□□□ -1.23
SMG6-219ENST00000575663 SEMA3EO15041 775 aa7.35□□□□□ -1.23
SMG6-219ENST00000575663 FGFR2P21802 821 aa7.35□□□□□ -1.23
SMG6-219ENST00000575663 DNAJB2P25686 324 aa7.35□□□□□ -1.23
SMG6-219ENST00000575663 HOXA7P31268 230 aaPredicted RBP7.35□□□□□ -1.23
SMG6-219ENST00000575663 BTDP43251 543 aa7.35□□□□□ -1.23
SMG6-219ENST00000575663 CCNA1P78396 465 aa7.35□□□□□ -1.23
SMG6-219ENST00000575663 MRPS5P82675 430 aaKnown RBP7.35□□□□□ -1.23
SMG6-219ENST00000575663 MAP2K5Q13163 448 aa7.35□□□□□ -1.23
SMG6-219ENST00000575663 MTMR2Q13614 643 aa7.35□□□□□ -1.23
SMG6-219ENST00000575663 CCL14Q16627 93 aa7.35□□□□□ -1.23
SMG6-219ENST00000575663 MORN1Q5T089 497 aa7.35□□□□□ -1.23
SMG6-219ENST00000575663 ARRDC4Q8NCT1 418 aa7.35□□□□□ -1.23
SMG6-219ENST00000575663 USP6NLQ92738 828 aa7.35□□□□□ -1.23
SMG6-219ENST00000575663 ASB2Q96Q27 587 aa7.35□□□□□ -1.23
SMG6-219ENST00000575663 PAGR1Q9BTK6 254 aa7.35□□□□□ -1.23
SMG6-219ENST00000575663 PDLIM7Q9NR12 457 aa7.35□□□□□ -1.23
SMG6-219ENST00000575663 ARIH1Q9Y4X5 557 aaPredicted RBP7.35□□□□□ -1.23
SMG6-219ENST00000575663 SYNGAP1Q96PV0 1343 aa7.34□□□□□ -1.23
SMG6-219ENST00000575663 FANCIQ9NVI1 1328 aa7.34□□□□□ -1.23
SMG6-219ENST00000575663 FAM196BA6NMK8 535 aa7.34□□□□□ -1.23
SMG6-219ENST00000575663 CAP2P40123 477 aa7.34□□□□□ -1.23
SMG6-219ENST00000575663 BACE1P56817 501 aa7.34□□□□□ -1.23
SMG6-219ENST00000575663 ATP2B2Q01814 1243 aa7.34□□□□□ -1.23
SMG6-219ENST00000575663 GRIN2CQ14957 1233 aa7.34□□□□□ -1.23
SMG6-219ENST00000575663 CCDC27Q2M243 656 aa7.34□□□□□ -1.23
SMG6-219ENST00000575663 WDR78Q5VTH9 848 aa7.34□□□□□ -1.23
SMG6-219ENST00000575663 SLC39A5Q6ZMH5 540 aa7.34□□□□□ -1.23
SMG6-219ENST00000575663 PPM1EQ8WY54 764 aa7.34□□□□□ -1.23
SMG6-219ENST00000575663 TIFAQ96CG3 184 aa7.34□□□□□ -1.23
SMG6-219ENST00000575663 EDC3Q96F86 508 aaKnown RBP7.34□□□□□ -1.23
SMG6-219ENST00000575663 ZNF576Q9H609 170 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms