RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 PTPRFP10586 1907 aa12.39□□□□□ -0.43
CALCOCO2-227ENST00000575560 HMGCRP04035 888 aa12.39□□□□□ -0.43
CALCOCO2-227ENST00000575560 UBTFL1P0CB47 393 aaPredicted RBP12.39□□□□□ -0.43
CALCOCO2-227ENST00000575560 TIMM10P62072 90 aa12.39□□□□□ -0.43
CALCOCO2-227ENST00000575560 MECOMQ03112 1051 aa12.39□□□□□ -0.43
CALCOCO2-227ENST00000575560 SPP2Q13103 211 aa12.39□□□□□ -0.43
CALCOCO2-227ENST00000575560 PICALMQ13492 652 aa12.39□□□□□ -0.43
CALCOCO2-227ENST00000575560 LRIT3Q3SXY7 679 aa12.39□□□□□ -0.43
CALCOCO2-227ENST00000575560 SPTY2D1Q68D10 685 aaPredicted RBP12.39□□□□□ -0.43
CALCOCO2-227ENST00000575560 ZNF280CQ8ND82 737 aa12.39□□□□□ -0.43
CALCOCO2-227ENST00000575560 NBPF3Q9H094 633 aa12.39□□□□□ -0.43
CALCOCO2-227ENST00000575560 OSBPL5Q9H0X9 879 aaPredicted RBP12.39□□□□□ -0.43
CALCOCO2-227ENST00000575560 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.39□□□□□ -0.43
CALCOCO2-227ENST00000575560 COPRSQ9NQ92 184 aa12.39□□□□□ -0.43
CALCOCO2-227ENST00000575560 ABCF2Q9UG63 623 aa12.39□□□□□ -0.43
CALCOCO2-227ENST00000575560 OGDHLQ9ULD0 1010 aa12.39□□□□□ -0.43
CALCOCO2-227ENST00000575560 PA2G4Q9UQ80 394 aaKnown RBP12.39□□□□□ -0.43
CALCOCO2-227ENST00000575560 DOCK2Q92608 1830 aa12.39□□□□□ -0.43
CALCOCO2-227ENST00000575560 MYH2Q9UKX2 1941 aa12.39□□□□□ -0.43
CALCOCO2-227ENST00000575560 MROH7-TTC4A0A0A0MT08 1334 aa12.38□□□□□ -0.43
CALCOCO2-227ENST00000575560 FAM196BA6NMK8 535 aa12.38□□□□□ -0.43
CALCOCO2-227ENST00000575560 MAP4K4O95819 1239 aaPredicted RBP12.38□□□□□ -0.43
CALCOCO2-227ENST00000575560 CAP2P40123 477 aa12.38□□□□□ -0.43
CALCOCO2-227ENST00000575560 TRIM32Q13049 653 aa12.38□□□□□ -0.43
CALCOCO2-227ENST00000575560 RRP1BQ14684 758 aaKnown RBP12.38□□□□□ -0.43
CALCOCO2-227ENST00000575560 ALDH1L2Q3SY69 923 aa12.38□□□□□ -0.43
CALCOCO2-227ENST00000575560 SH3D19Q5HYK7 790 aa12.38□□□□□ -0.43
CALCOCO2-227ENST00000575560 C7orf61Q8IZ16 206 aa12.38□□□□□ -0.43
CALCOCO2-227ENST00000575560 DEFB123Q8N688 67 aa12.38□□□□□ -0.43
CALCOCO2-227ENST00000575560 TBC1D2Q9BYX2 928 aa12.38□□□□□ -0.43
CALCOCO2-227ENST00000575560 ASCC2Q9H1I8 757 aaPredicted RBP12.38□□□□□ -0.43
CALCOCO2-227ENST00000575560 HMX1Q9NP08 348 aaPredicted RBP12.38□□□□□ -0.43
CALCOCO2-227ENST00000575560 ZMYND8Q9ULU4 1186 aaPredicted RBP12.38□□□□□ -0.43
CALCOCO2-227ENST00000575560 ALPK3Q96L96 1907 aa12.38□□□□□ -0.43
CALCOCO2-227ENST00000575560 DOCK1Q14185 1865 aa12.38□□□□□ -0.43
CALCOCO2-227ENST00000575560 E9PSI1 815 aa12.37□□□□□ -0.43
CALCOCO2-227ENST00000575560 HMGCS2P54868 508 aa12.37□□□□□ -0.43
CALCOCO2-227ENST00000575560 PABPC4Q13310 644 aaKnown RBP eCLIP12.37□□□□□ -0.43
CALCOCO2-227ENST00000575560 MAP3K21Q5TCX8 1036 aa12.37□□□□□ -0.43
CALCOCO2-227ENST00000575560 MORF4L1Q9UBU8 362 aa12.37□□□□□ -0.43
CALCOCO2-227ENST00000575560 USP17L5A8MUK1 530 aa12.36□□□□□ -0.43
CALCOCO2-227ENST00000575560 MAGEA10P43363 369 aaPredicted RBP12.36□□□□□ -0.43
CALCOCO2-227ENST00000575560 SLFN5Q08AF3 891 aa12.36□□□□□ -0.43
CALCOCO2-227ENST00000575560 Q7L0L9 218 aa12.36□□□□□ -0.43
CALCOCO2-227ENST00000575560 ERICH6Q7L0X2 663 aa12.36□□□□□ -0.43
CALCOCO2-227ENST00000575560 TRIB2Q92519 343 aa12.36□□□□□ -0.43
CALCOCO2-227ENST00000575560 NSUN4Q96CB9 384 aaKnown RBP12.36□□□□□ -0.43
CALCOCO2-227ENST00000575560 XAGE2Q96GT9 111 aa12.36□□□□□ -0.43
CALCOCO2-227ENST00000575560 C11orf49Q9H6J7 331 aa12.36□□□□□ -0.43
CALCOCO2-227ENST00000575560 STXBP5LQ9Y2K9 1186 aa12.36□□□□□ -0.43
CALCOCO2-227ENST00000575560 COL2A1P02458 1487 aaPredicted RBP12.35□□□□□ -0.43
CALCOCO2-227ENST00000575560 A0A1B0GUL7 405 aa12.35□□□□□ -0.43
CALCOCO2-227ENST00000575560 XRCC5P13010 732 aaKnown RBP12.35□□□□□ -0.43
CALCOCO2-227ENST00000575560 SYN1P17600 705 aa12.35□□□□□ -0.43
CALCOCO2-227ENST00000575560 HOXA7P31268 230 aaPredicted RBP12.35□□□□□ -0.43
CALCOCO2-227ENST00000575560 TDHQ8IZJ6 230 aa12.35□□□□□ -0.43
CALCOCO2-227ENST00000575560 WDR18Q9BV38 432 aa12.35□□□□□ -0.43
CALCOCO2-227ENST00000575560 MTMR10Q9NXD2 777 aa12.35□□□□□ -0.43
CALCOCO2-227ENST00000575560 HMG20BQ9P0W2 317 aa12.35□□□□□ -0.43
CALCOCO2-227ENST00000575560 HDAC5Q9UQL6 1122 aa12.35□□□□□ -0.43
CALCOCO2-227ENST00000575560 AKAP2Q9Y2D5 859 aa12.35□□□□□ -0.43
CALCOCO2-227ENST00000575560 U3KPZ7 1027 aaPredicted RBP12.35□□□□□ -0.43
CALCOCO2-227ENST00000575560 PFASO15067 1338 aa12.35□□□□□ -0.43
CALCOCO2-227ENST00000575560 LDHCP07864 332 aa12.34□□□□□ -0.43
CALCOCO2-227ENST00000575560 COL6A1P12109 1028 aa12.34□□□□□ -0.43
CALCOCO2-227ENST00000575560 BACE1P56817 501 aa12.34□□□□□ -0.43
CALCOCO2-227ENST00000575560 GSTO1P78417 241 aa12.34□□□□□ -0.43
CALCOCO2-227ENST00000575560 TFCP2Q12800 502 aa12.34□□□□□ -0.43
CALCOCO2-227ENST00000575560 MVPQ14764 893 aaKnown RBP12.34□□□□□ -0.43
CALCOCO2-227ENST00000575560 P2RX7Q99572 595 aaKnown RBP12.34□□□□□ -0.43
CALCOCO2-227ENST00000575560 HERC5Q9UII4 1024 aaKnown RBP12.34□□□□□ -0.43
CALCOCO2-227ENST00000575560 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.34□□□□□ -0.43
CALCOCO2-227ENST00000575560 VCANP13611 3396 aa12.33□□□□□ -0.43
CALCOCO2-227ENST00000575560 LOC285556D6RIA3 1793 aa12.33□□□□□ -0.44
CALCOCO2-227ENST00000575560 EYSQ5T1H1 3165 aa12.33□□□□□ -0.44
CALCOCO2-227ENST00000575560 PRKAR2AP13861 404 aaKnown RBP12.33□□□□□ -0.44
CALCOCO2-227ENST00000575560 CYP2B6P20813 491 aa12.33□□□□□ -0.44
CALCOCO2-227ENST00000575560 JAG1P78504 1218 aa12.33□□□□□ -0.44
CALCOCO2-227ENST00000575560 LHX8Q68G74 356 aa12.33□□□□□ -0.44
CALCOCO2-227ENST00000575560 PI16Q6UXB8 463 aa12.33□□□□□ -0.44
CALCOCO2-227ENST00000575560 TBC1D9Q6ZT07 1266 aa12.33□□□□□ -0.44
CALCOCO2-227ENST00000575560 SPATA5Q8NB90 893 aa12.33□□□□□ -0.44
CALCOCO2-227ENST00000575560 GPRC5AQ8NFJ5 357 aa12.33□□□□□ -0.44
CALCOCO2-227ENST00000575560 USP6NLQ92738 828 aa12.33□□□□□ -0.44
CALCOCO2-227ENST00000575560 NUDT12Q9BQG2 462 aa12.33□□□□□ -0.44
CALCOCO2-227ENST00000575560 AS3MTQ9HBK9 375 aa12.33□□□□□ -0.44
CALCOCO2-227ENST00000575560 TXNRD2Q9NNW7 524 aa12.33□□□□□ -0.44
CALCOCO2-227ENST00000575560 SMC4Q9NTJ3 1288 aa12.33□□□□□ -0.44
CALCOCO2-227ENST00000575560 PI4KBQ9UBF8 816 aa12.33□□□□□ -0.44
CALCOCO2-227ENST00000575560 NOB1Q9ULX3 412 aaKnown RBP12.33□□□□□ -0.44
CALCOCO2-227ENST00000575560 PLXNB2O15031 1838 aa12.32□□□□□ -0.44
CALCOCO2-227ENST00000575560 PEX10O60683 326 aa12.32□□□□□ -0.44
CALCOCO2-227ENST00000575560 HERVK_113P62684 666 aa12.32□□□□□ -0.44
CALCOCO2-227ENST00000575560 CACNB2Q08289 660 aaPredicted RBP12.32□□□□□ -0.44
CALCOCO2-227ENST00000575560 MTX1Q13505 466 aa12.32□□□□□ -0.44
CALCOCO2-227ENST00000575560 MTMR2Q13614 643 aa12.32□□□□□ -0.44
CALCOCO2-227ENST00000575560 POTEEQ6S8J3 1075 aa12.32□□□□□ -0.44
CALCOCO2-227ENST00000575560 METTL16Q86W50 562 aaKnown RBP12.32□□□□□ -0.44
CALCOCO2-227ENST00000575560 TRMT44Q8IYL2 757 aaKnown RBP12.32□□□□□ -0.44
CALCOCO2-227ENST00000575560 TRMT2AQ8IZ69 625 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms