RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 GRIN3AQ8TCU5 1115 aa6.68□□□□□ -1.34
TSR1-203ENST00000575049 STAG1Q8WVM7 1258 aa6.68□□□□□ -1.34
TSR1-203ENST00000575049 WDR89Q96FK6 387 aaPredicted RBP6.68□□□□□ -1.34
TSR1-203ENST00000575049 MYRFLQ96LU7 910 aa6.68□□□□□ -1.34
TSR1-203ENST00000575049 SPC25Q9HBM1 224 aa6.68□□□□□ -1.34
TSR1-203ENST00000575049 DDX56Q9NY93 547 aaKnown RBP6.68□□□□□ -1.34
TSR1-203ENST00000575049 SYNGAP1Q96PV0 1343 aa6.68□□□□□ -1.34
TSR1-203ENST00000575049 DHX15O43143 795 aaKnown RBP6.67□□□□□ -1.34
TSR1-203ENST00000575049 ATF4P18848 351 aaPredicted RBP6.67□□□□□ -1.34
TSR1-203ENST00000575049 IRX6P78412 446 aaPredicted RBP6.67□□□□□ -1.34
TSR1-203ENST00000575049 SERINC3Q13530 473 aa6.67□□□□□ -1.34
TSR1-203ENST00000575049 LRRC14Q15048 493 aa6.67□□□□□ -1.34
TSR1-203ENST00000575049 KIF4BQ2VIQ3 1234 aa6.67□□□□□ -1.34
TSR1-203ENST00000575049 PRR23CQ6ZRP0 262 aa6.67□□□□□ -1.34
TSR1-203ENST00000575049 C2CD4AQ8NCU7 369 aaPredicted RBP6.67□□□□□ -1.34
TSR1-203ENST00000575049 PMM1Q92871 262 aa6.67□□□□□ -1.34
TSR1-203ENST00000575049 AP4E1Q9UPM8 1137 aa6.67□□□□□ -1.34
TSR1-203ENST00000575049 HIF3AQ9Y2N7 669 aa6.67□□□□□ -1.34
TSR1-203ENST00000575049 BMP3P12645 472 aa6.66□□□□□ -1.34
TSR1-203ENST00000575049 GJA8P48165 433 aa6.66□□□□□ -1.34
TSR1-203ENST00000575049 TTBK2Q6IQ55 1244 aa6.66□□□□□ -1.34
TSR1-203ENST00000575049 LLGL2Q6P1M3 1020 aa6.66□□□□□ -1.34
TSR1-203ENST00000575049 MPRIPQ6WCQ1 1025 aa6.66□□□□□ -1.34
TSR1-203ENST00000575049 FAM20CQ8IXL6 584 aa6.66□□□□□ -1.34
TSR1-203ENST00000575049 CKAP2LQ8IYA6 745 aa6.66□□□□□ -1.34
TSR1-203ENST00000575049 GPBAR1Q8TDU6 330 aa6.66□□□□□ -1.34
TSR1-203ENST00000575049 MKL1Q969V6 931 aa6.66□□□□□ -1.34
TSR1-203ENST00000575049 RNPC3Q96LT9 517 aaKnown RBP6.66□□□□□ -1.34
TSR1-203ENST00000575049 NOC4LQ9BVI4 516 aaKnown RBP6.66□□□□□ -1.34
TSR1-203ENST00000575049 SEMA6BQ9H3T3 888 aa6.66□□□□□ -1.34
TSR1-203ENST00000575049 CACNA2D2Q9NY47 1150 aa6.66□□□□□ -1.34
TSR1-203ENST00000575049 GABBR1Q9UBS5 961 aa6.66□□□□□ -1.34
TSR1-203ENST00000575049 G3BP2Q9UN86 482 aaKnown RBP6.66□□□□□ -1.34
TSR1-203ENST00000575049 CYP8B1Q9UNU6 501 aa6.66□□□□□ -1.34
TSR1-203ENST00000575049 RAXQ9Y2V3 346 aa6.66□□□□□ -1.34
TSR1-203ENST00000575049 TMPRSS2O15393 492 aa6.65□□□□□ -1.34
TSR1-203ENST00000575049 TRIM37O94972 964 aa6.65□□□□□ -1.34
TSR1-203ENST00000575049 SLFN14P0C7P3 912 aa6.65□□□□□ -1.34
TSR1-203ENST00000575049 LIG3P49916 1009 aa6.65□□□□□ -1.34
TSR1-203ENST00000575049 MAP3K11Q16584 847 aa6.65□□□□□ -1.34
TSR1-203ENST00000575049 SGO2Q562F6 1265 aa6.65□□□□□ -1.34
TSR1-203ENST00000575049 PLEKHG4Q58EX7 1191 aa6.65□□□□□ -1.34
TSR1-203ENST00000575049 NBPF6Q5VWK0 638 aa6.65□□□□□ -1.34
TSR1-203ENST00000575049 DYMQ7RTS9 669 aa6.65□□□□□ -1.34
TSR1-203ENST00000575049 ACSBG1Q96GR2 724 aa6.65□□□□□ -1.34
TSR1-203ENST00000575049 NBPF4Q96M43 638 aa6.65□□□□□ -1.34
TSR1-203ENST00000575049 PPP1R9AQ9ULJ8 1098 aa6.65□□□□□ -1.34
TSR1-203ENST00000575049 PCDHGC5Q9Y5F6 944 aa6.65□□□□□ -1.34
TSR1-203ENST00000575049 ACTL7BQ9Y614 415 aa6.65□□□□□ -1.34
TSR1-203ENST00000575049 PPP1R12AO14974 1030 aaPredicted RBP6.64□□□□□ -1.35
TSR1-203ENST00000575049 U2SURPO15042 1029 aaKnown RBP6.64□□□□□ -1.35
TSR1-203ENST00000575049 ADAM23O75077 832 aa6.64□□□□□ -1.35
TSR1-203ENST00000575049 EIF3JO75822 258 aaKnown RBP6.64□□□□□ -1.35
TSR1-203ENST00000575049 USP11P51784 963 aa6.64□□□□□ -1.35
TSR1-203ENST00000575049 RPS26P62854 115 aaKnown RBP6.64□□□□□ -1.35
TSR1-203ENST00000575049 AMPD3Q01432 767 aa6.64□□□□□ -1.35
TSR1-203ENST00000575049 ID3Q02535 119 aa6.64□□□□□ -1.35
TSR1-203ENST00000575049 SCARA3Q6AZY7 606 aa6.64□□□□□ -1.35
TSR1-203ENST00000575049 KCNF1Q9H3M0 494 aa6.64□□□□□ -1.35
TSR1-203ENST00000575049 GSX1Q9H4S2 264 aaPredicted RBP6.64□□□□□ -1.35
TSR1-203ENST00000575049 CRIM1Q9NZV1 1036 aa6.64□□□□□ -1.35
TSR1-203ENST00000575049 STOML1Q9UBI4 398 aa6.64□□□□□ -1.35
TSR1-203ENST00000575049 S100BP04271 92 aaPredicted RBP6.63□□□□□ -1.35
TSR1-203ENST00000575049 RLBP1P12271 317 aa6.63□□□□□ -1.35
TSR1-203ENST00000575049 MAP4P27816 1152 aaKnown RBP6.63□□□□□ -1.35
TSR1-203ENST00000575049 RXRBP28702 533 aa6.63□□□□□ -1.35
TSR1-203ENST00000575049 ASPAP45381 313 aa6.63□□□□□ -1.35
TSR1-203ENST00000575049 PAK2Q13177 524 aa6.63□□□□□ -1.35
TSR1-203ENST00000575049 CDPF1Q6NVV7 123 aa6.63□□□□□ -1.35
TSR1-203ENST00000575049 AGMOQ6ZNB7 445 aa6.63□□□□□ -1.35
TSR1-203ENST00000575049 BEND4Q6ZU67 534 aa6.63□□□□□ -1.35
TSR1-203ENST00000575049 HS2ST1Q7LGA3 356 aa6.63□□□□□ -1.35
TSR1-203ENST00000575049 CLEC10AQ8IUN9 316 aa6.63□□□□□ -1.35
TSR1-203ENST00000575049 FBLIM1Q8WUP2 373 aa6.63□□□□□ -1.35
TSR1-203ENST00000575049 GAL3ST3Q96A11 431 aa6.63□□□□□ -1.35
TSR1-203ENST00000575049 FAM105AQ9NUU6 356 aa6.63□□□□□ -1.35
TSR1-203ENST00000575049 GGT7Q9UJ14 662 aa6.63□□□□□ -1.35
TSR1-203ENST00000575049 PRKAB1Q9Y478 270 aa6.63□□□□□ -1.35
TSR1-203ENST00000575049 HMX2A2RU54 273 aa6.62□□□□□ -1.35
TSR1-203ENST00000575049 RAB6AP20340 208 aa6.62□□□□□ -1.35
TSR1-203ENST00000575049 ITGB7P26010 798 aa6.62□□□□□ -1.35
TSR1-203ENST00000575049 ZC3H12AQ5D1E8 599 aaKnown RBP6.62□□□□□ -1.35
TSR1-203ENST00000575049 FMNL3Q8IVF7 1028 aa6.62□□□□□ -1.35
TSR1-203ENST00000575049 TRIM42Q8IWZ5 723 aa6.62□□□□□ -1.35
TSR1-203ENST00000575049 FANCD2OSQ96PS1 177 aa6.62□□□□□ -1.35
TSR1-203ENST00000575049 FAM83CQ9BQN1 747 aa6.62□□□□□ -1.35
TSR1-203ENST00000575049 YIPF2Q9BWQ6 316 aa6.62□□□□□ -1.35
TSR1-203ENST00000575049 ATXN3LQ9H3M9 355 aa6.62□□□□□ -1.35
TSR1-203ENST00000575049 C7orf69Q9H7B7 122 aa6.62□□□□□ -1.35
TSR1-203ENST00000575049 PCDHA4Q9UN74 947 aa6.62□□□□□ -1.35
TSR1-203ENST00000575049 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.61□□□□□ -1.35
TSR1-203ENST00000575049 TFE3P19532 575 aaPredicted RBP6.61□□□□□ -1.35
TSR1-203ENST00000575049 FSTP19883 344 aa6.61□□□□□ -1.35
TSR1-203ENST00000575049 LMNB1P20700 586 aa6.61□□□□□ -1.35
TSR1-203ENST00000575049 PTPN11Q06124 597 aaPredicted RBP6.61□□□□□ -1.35
TSR1-203ENST00000575049 PRSS36Q5K4E3 855 aa6.61□□□□□ -1.35
TSR1-203ENST00000575049 APBB1IPQ7Z5R6 666 aaPredicted RBP6.61□□□□□ -1.35
TSR1-203ENST00000575049 CCAR1Q8IX12 1150 aaKnown RBP6.61□□□□□ -1.35
TSR1-203ENST00000575049 CCDC146Q8IYE0 955 aa6.61□□□□□ -1.35
TSR1-203ENST00000575049 PHC3Q8NDX5 983 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms