RNA–Protein interactions for RNA: ENST00000573212.5

NPLOC4-211, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-211ENST00000573212 USP44Q9H0E7 712 aa10.17□□□□□ -0.78
NPLOC4-211ENST00000573212 RNF208Q9H0X6 261 aa10.17□□□□□ -0.78
NPLOC4-211ENST00000573212 OCEL1Q9H607 264 aa10.17□□□□□ -0.78
NPLOC4-211ENST00000573212 GABRQQ9UN88 632 aa10.17□□□□□ -0.78
NPLOC4-211ENST00000573212 ZBTB7BO15156 539 aaPredicted RBP10.16□□□□□ -0.78
NPLOC4-211ENST00000573212 IFIT1P09914 478 aaKnown RBP10.16□□□□□ -0.78
NPLOC4-211ENST00000573212 CYP2C8P10632 490 aa10.16□□□□□ -0.78
NPLOC4-211ENST00000573212 UBXN2AP68543 259 aa10.16□□□□□ -0.78
NPLOC4-211ENST00000573212 PRKCZQ05513 592 aa10.16□□□□□ -0.78
NPLOC4-211ENST00000573212 TCP10Q12799 353 aa10.16□□□□□ -0.78
NPLOC4-211ENST00000573212 MRPL50Q8N5N7 158 aaKnown RBP10.16□□□□□ -0.78
NPLOC4-211ENST00000573212 LPIN2Q92539 896 aa10.16□□□□□ -0.78
NPLOC4-211ENST00000573212 ARID3AQ99856 593 aa10.16□□□□□ -0.78
NPLOC4-211ENST00000573212 DAGLAQ9Y4D2 1042 aa10.16□□□□□ -0.78
NPLOC4-211ENST00000573212 NR2E3Q9Y5X4 410 aa10.16□□□□□ -0.78
NPLOC4-211ENST00000573212 ARAP2Q8WZ64 1704 aa10.16□□□□□ -0.78
NPLOC4-211ENST00000573212 ATRNL1Q5VV63 1379 aa10.15□□□□□ -0.78
NPLOC4-211ENST00000573212 A0A1W2PPC1 479 aa10.15□□□□□ -0.78
NPLOC4-211ENST00000573212 A6NJR5 290 aa10.15□□□□□ -0.78
NPLOC4-211ENST00000573212 EYA2O00167 538 aa10.15□□□□□ -0.78
NPLOC4-211ENST00000573212 MS4A1P11836 297 aa10.15□□□□□ -0.78
NPLOC4-211ENST00000573212 FCGRTP55899 365 aa10.15□□□□□ -0.78
NPLOC4-211ENST00000573212 PUM3Q15397 648 aaKnown RBP10.15□□□□□ -0.78
NPLOC4-211ENST00000573212 DIXDC1Q155Q3 683 aa10.15□□□□□ -0.78
NPLOC4-211ENST00000573212 FASTKD5Q7L8L6 764 aaKnown RBP10.15□□□□□ -0.78
NPLOC4-211ENST00000573212 ATG9AQ7Z3C6 839 aa10.15□□□□□ -0.78
NPLOC4-211ENST00000573212 SLAIN1Q8ND83 568 aa10.15□□□□□ -0.78
NPLOC4-211ENST00000573212 PXYLP1Q8TE99 480 aa10.15□□□□□ -0.78
NPLOC4-211ENST00000573212 IDI2Q9BXS1 227 aa10.15□□□□□ -0.78
NPLOC4-211ENST00000573212 UNC93B1Q9H1C4 597 aa10.15□□□□□ -0.78
NPLOC4-211ENST00000573212 USP40Q9NVE5 1235 aa10.15□□□□□ -0.78
NPLOC4-211ENST00000573212 AFG3L2Q9Y4W6 797 aa10.15□□□□□ -0.78
NPLOC4-211ENST00000573212 ZSWIM8A7E2V4 1837 aa10.14□□□□□ -0.79
NPLOC4-211ENST00000573212 SALL1Q9NSC2 1324 aa10.14□□□□□ -0.79
NPLOC4-211ENST00000573212 CACNA1FO60840 1977 aa10.14□□□□□ -0.79
NPLOC4-211ENST00000573212 TRIOBPQ9H2D6 2365 aa10.14□□□□□ -0.79
NPLOC4-211ENST00000573212 A0A0G2JLL6 359 aaPredicted RBP10.14□□□□□ -0.79
NPLOC4-211ENST00000573212 APBB1O00213 710 aa10.14□□□□□ -0.79
NPLOC4-211ENST00000573212 ADCY3O60266 1144 aa10.14□□□□□ -0.79
NPLOC4-211ENST00000573212 PRDX5P30044 214 aa10.14□□□□□ -0.79
NPLOC4-211ENST00000573212 FLT3LGP49771 235 aa10.14□□□□□ -0.79
NPLOC4-211ENST00000573212 IRF5Q13568 498 aa10.14□□□□□ -0.79
NPLOC4-211ENST00000573212 SH3BP5LQ7L8J4 393 aa10.14□□□□□ -0.79
NPLOC4-211ENST00000573212 PRRT2Q7Z6L0 340 aaPredicted RBP10.14□□□□□ -0.79
NPLOC4-211ENST00000573212 PARK7Q99497 189 aaKnown RBP10.14□□□□□ -0.79
NPLOC4-211ENST00000573212 MRS2Q9HD23 443 aa10.14□□□□□ -0.79
NPLOC4-211ENST00000573212 BIN2Q9UBW5 565 aaPredicted RBP10.14□□□□□ -0.79
NPLOC4-211ENST00000573212 SLC45A1Q9Y2W3 748 aa10.14□□□□□ -0.79
NPLOC4-211ENST00000573212 ZHX2Q9Y6X8 837 aa10.14□□□□□ -0.79
NPLOC4-211ENST00000573212 ENTPD3O75355 529 aa10.13□□□□□ -0.79
NPLOC4-211ENST00000573212 FARP2O94887 1054 aaPredicted RBP10.13□□□□□ -0.79
NPLOC4-211ENST00000573212 SLC5A1P13866 664 aa10.13□□□□□ -0.79
NPLOC4-211ENST00000573212 PTPRAP18433 802 aa10.13□□□□□ -0.79
NPLOC4-211ENST00000573212 TMEM92Q6UXU6 159 aa10.13□□□□□ -0.79
NPLOC4-211ENST00000573212 SCYL3Q8IZE3 742 aa10.13□□□□□ -0.79
NPLOC4-211ENST00000573212 FAM163AQ96GL9 167 aaPredicted RBP10.13□□□□□ -0.79
NPLOC4-211ENST00000573212 PAK6Q9NQU5 681 aaPredicted RBP10.13□□□□□ -0.79
NPLOC4-211ENST00000573212 RANBP2P49792 3224 aaKnown RBP10.13□□□□□ -0.79
NPLOC4-211ENST00000573212 CEP290O15078 2479 aa10.13□□□□□ -0.79
NPLOC4-211ENST00000573212 ZNF521Q96K83 1311 aa10.12□□□□□ -0.79
NPLOC4-211ENST00000573212 SOX1O00570 391 aaPredicted RBP10.12□□□□□ -0.79
NPLOC4-211ENST00000573212 LDHBP07195 334 aaKnown RBP10.12□□□□□ -0.79
NPLOC4-211ENST00000573212 SLURP2P0DP57 97 aa10.12□□□□□ -0.79
NPLOC4-211ENST00000573212 PCMTD1Q96MG8 357 aaPredicted RBP10.12□□□□□ -0.79
NPLOC4-211ENST00000573212 GDF15Q99988 308 aa10.12□□□□□ -0.79
NPLOC4-211ENST00000573212 TMUB1Q9BVT8 246 aa10.12□□□□□ -0.79
NPLOC4-211ENST00000573212 REPIN1Q9BWE0 567 aaKnown RBP10.12□□□□□ -0.79
NPLOC4-211ENST00000573212 GAKO14976 1311 aa10.11□□□□□ -0.79
NPLOC4-211ENST00000573212 PTPRCP08575 1304 aa10.11□□□□□ -0.79
NPLOC4-211ENST00000573212 DDTLA6NHG4 134 aaPredicted RBP10.11□□□□□ -0.79
NPLOC4-211ENST00000573212 DLL1O00548 723 aa10.11□□□□□ -0.79
NPLOC4-211ENST00000573212 TBC1D12O60347 775 aa10.11□□□□□ -0.79
NPLOC4-211ENST00000573212 EVI5O60447 810 aa10.11□□□□□ -0.79
NPLOC4-211ENST00000573212 CTNND1O60716 968 aaKnown RBP10.11□□□□□ -0.79
NPLOC4-211ENST00000573212 CIAO1O76071 339 aa10.11□□□□□ -0.79
NPLOC4-211ENST00000573212 TFRCP02786 760 aaKnown RBP10.11□□□□□ -0.79
NPLOC4-211ENST00000573212 INHAP05111 366 aa10.11□□□□□ -0.79
NPLOC4-211ENST00000573212 ELNP15502 786 aa10.11□□□□□ -0.79
NPLOC4-211ENST00000573212 BMP8BP34820 402 aa10.11□□□□□ -0.79
NPLOC4-211ENST00000573212 RGS3P49796 1198 aa10.11□□□□□ -0.79
NPLOC4-211ENST00000573212 SLC17A8Q8NDX2 589 aa10.11□□□□□ -0.79
NPLOC4-211ENST00000573212 DEFB118Q96PH6 123 aa10.11□□□□□ -0.79
NPLOC4-211ENST00000573212 STAP2Q9UGK3 403 aa10.11□□□□□ -0.79
NPLOC4-211ENST00000573212 GJD2Q9UKL4 321 aa10.11□□□□□ -0.79
NPLOC4-211ENST00000573212 DENND2AQ9ULE3 1009 aa10.11□□□□□ -0.79
NPLOC4-211ENST00000573212 ZEB1P37275 1124 aaPredicted RBP10.1□□□□□ -0.79
NPLOC4-211ENST00000573212 PHKA1P46020 1223 aa10.1□□□□□ -0.79
NPLOC4-211ENST00000573212 SH3D19Q5HYK7 790 aa10.1□□□□□ -0.79
NPLOC4-211ENST00000573212 GADL1Q6ZQY3 521 aa10.1□□□□□ -0.79
NPLOC4-211ENST00000573212 SSH1Q8WYL5 1049 aa10.1□□□□□ -0.79
NPLOC4-211ENST00000573212 LRCH3Q96II8 777 aa10.1□□□□□ -0.79
NPLOC4-211ENST00000573212 PAWRQ96IZ0 340 aaKnown RBP10.1□□□□□ -0.79
NPLOC4-211ENST00000573212 DDX4Q9NQI0 724 aaKnown RBP10.1□□□□□ -0.79
NPLOC4-211ENST00000573212 PICK1Q9NRD5 415 aa10.1□□□□□ -0.79
NPLOC4-211ENST00000573212 GNL3LQ9NVN8 582 aaKnown RBP10.1□□□□□ -0.79
NPLOC4-211ENST00000573212 CEP126Q9P2H0 1117 aa10.1□□□□□ -0.79
NPLOC4-211ENST00000573212 TNPO2O14787 897 aaKnown RBP10.09□□□□□ -0.79
NPLOC4-211ENST00000573212 RHBDL3P58872 404 aa10.09□□□□□ -0.79
NPLOC4-211ENST00000573212 ATP2B3Q16720 1220 aa10.09□□□□□ -0.79
NPLOC4-211ENST00000573212 GPR153Q6NV75 609 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms