RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 PI16Q6UXB8 463 aa22.76■■□□□ 1.23
LINC01238-205ENST00000567549 PCDH10Q9P2E7 1040 aa22.76■■□□□ 1.23
LINC01238-205ENST00000567549 BIN2Q9UBW5 565 aaPredicted RBP22.76■■□□□ 1.23
LINC01238-205ENST00000567549 NOP58Q9Y2X3 529 aaKnown RBP22.76■■□□□ 1.23
LINC01238-205ENST00000567549 PTPRFP10586 1907 aa22.75■■□□□ 1.23
LINC01238-205ENST00000567549 CYP2C8P10632 490 aa22.75■■□□□ 1.23
LINC01238-205ENST00000567549 CAP1Q01518 475 aa22.75■■□□□ 1.23
LINC01238-205ENST00000567549 SLAIN1Q8ND83 568 aa22.75■■□□□ 1.23
LINC01238-205ENST00000567549 SH3TC2Q8TF17 1288 aa22.75■■□□□ 1.23
LINC01238-205ENST00000567549 GINM1Q9NU53 330 aa22.75■■□□□ 1.23
LINC01238-205ENST00000567549 TNNQ9UQP3 1299 aa22.75■■□□□ 1.23
LINC01238-205ENST00000567549 USP17L5A8MUK1 530 aa22.74■■□□□ 1.23
LINC01238-205ENST00000567549 PPP4CP60510 307 aa22.74■■□□□ 1.23
LINC01238-205ENST00000567549 ZNF280CQ8ND82 737 aa22.74■■□□□ 1.23
LINC01238-205ENST00000567549 CHMP4BQ9H444 224 aaKnown RBP22.74■■□□□ 1.23
LINC01238-205ENST00000567549 MGAMO43451 1857 aa22.74■■□□□ 1.23
LINC01238-205ENST00000567549 ZBED9Q6R2W3 1325 aa22.74■■□□□ 1.23
LINC01238-205ENST00000567549 HLA-DOAP06340 250 aa22.73■■□□□ 1.23
LINC01238-205ENST00000567549 ASNSP08243 561 aa22.73■■□□□ 1.23
LINC01238-205ENST00000567549 CAP2P40123 477 aa22.73■■□□□ 1.23
LINC01238-205ENST00000567549 GCLCP48506 637 aaPredicted RBP22.73■■□□□ 1.23
LINC01238-205ENST00000567549 FOXP4Q8IVH2 680 aaPredicted RBP22.73■■□□□ 1.23
LINC01238-205ENST00000567549 CRACR2BQ8N4Y2 399 aaPredicted RBP22.73■■□□□ 1.23
LINC01238-205ENST00000567549 ZNF384Q8TF68 577 aa22.73■■□□□ 1.23
LINC01238-205ENST00000567549 COA7Q96BR5 231 aa22.73■■□□□ 1.23
LINC01238-205ENST00000567549 DBNDD2Q9BQY9 259 aa22.73■■□□□ 1.23
LINC01238-205ENST00000567549 AATFQ9NY61 560 aaKnown RBP eCLIP22.73■■□□□ 1.23
LINC01238-205ENST00000567549 PHIPQ8WWQ0 1821 aa22.73■■□□□ 1.23
LINC01238-205ENST00000567549 TNPO2O14787 897 aaKnown RBP22.72■■□□□ 1.23
LINC01238-205ENST00000567549 ZBTB7BO15156 539 aaPredicted RBP22.72■■□□□ 1.23
LINC01238-205ENST00000567549 SH3RF3Q8TEJ3 882 aaPredicted RBP22.72■■□□□ 1.23
LINC01238-205ENST00000567549 SNRKQ9NRH2 765 aa22.72■■□□□ 1.23
LINC01238-205ENST00000567549 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.72■■□□□ 1.23
LINC01238-205ENST00000567549 ZSWIM8A7E2V4 1837 aa22.71■■□□□ 1.23
LINC01238-205ENST00000567549 ATAD5Q96QE3 1844 aa22.71■■□□□ 1.23
LINC01238-205ENST00000567549 FAM110CQ1W6H9 321 aa22.71■■□□□ 1.23
LINC01238-205ENST00000567549 CENPFP49454 3210 aa22.71■■□□□ 1.23
LINC01238-205ENST00000567549 MYCP01106 439 aaPredicted RBP22.7■■□□□ 1.22
LINC01238-205ENST00000567549 SPP2Q13103 211 aa22.7■■□□□ 1.22
LINC01238-205ENST00000567549 MIER1Q8N108 512 aa22.7■■□□□ 1.22
LINC01238-205ENST00000567549 TMOD4Q9NZQ9 345 aa22.7■■□□□ 1.22
LINC01238-205ENST00000567549 ECM2O94769 699 aaPredicted RBP22.69■■□□□ 1.22
LINC01238-205ENST00000567549 CYP2E1P05181 493 aaPredicted RBP22.69■■□□□ 1.22
LINC01238-205ENST00000567549 PRKCZQ05513 592 aa22.69■■□□□ 1.22
LINC01238-205ENST00000567549 MAP3K12Q12852 859 aa22.69■■□□□ 1.22
LINC01238-205ENST00000567549 IRF5Q13568 498 aa22.69■■□□□ 1.22
LINC01238-205ENST00000567549 PXYLP1Q8TE99 480 aa22.69■■□□□ 1.22
LINC01238-205ENST00000567549 TGFBRAP1Q8WUH2 860 aa22.69■■□□□ 1.22
LINC01238-205ENST00000567549 C1orf115Q9H7X2 142 aa22.69■■□□□ 1.22
LINC01238-205ENST00000567549 C19orf81C9J6K1 198 aa22.68■■□□□ 1.22
LINC01238-205ENST00000567549 HMMRO75330 724 aa22.68■■□□□ 1.22
LINC01238-205ENST00000567549 GJB1P08034 283 aa22.68■■□□□ 1.22
LINC01238-205ENST00000567549 ZAP70P43403 619 aa22.68■■□□□ 1.22
LINC01238-205ENST00000567549 TTF1Q15361 905 aaPredicted RBP22.68■■□□□ 1.22
LINC01238-205ENST00000567549 HTATIP2Q9BUP3 242 aa22.68■■□□□ 1.22
LINC01238-205ENST00000567549 RNF208Q9H0X6 261 aa22.68■■□□□ 1.22
LINC01238-205ENST00000567549 FOCADQ5VW36 1801 aa22.68■■□□□ 1.22
LINC01238-205ENST00000567549 LOC285556D6RIA3 1793 aa22.68■■□□□ 1.22
LINC01238-205ENST00000567549 FLT1P17948 1338 aa22.67■■□□□ 1.22
LINC01238-205ENST00000567549 FAM196BA6NMK8 535 aa22.67■■□□□ 1.22
LINC01238-205ENST00000567549 ADCY3O60266 1144 aa22.67■■□□□ 1.22
LINC01238-205ENST00000567549 IDH1O75874 414 aaKnown RBP22.67■■□□□ 1.22
LINC01238-205ENST00000567549 CYP7A1P22680 504 aa22.67■■□□□ 1.22
LINC01238-205ENST00000567549 CTGFP29279 349 aa22.67■■□□□ 1.22
LINC01238-205ENST00000567549 SH3D19Q5HYK7 790 aa22.67■■□□□ 1.22
LINC01238-205ENST00000567549 MAPKAPK5Q8IW41 473 aa22.67■■□□□ 1.22
LINC01238-205ENST00000567549 WDR18Q9BV38 432 aa22.67■■□□□ 1.22
LINC01238-205ENST00000567549 DBNLQ9UJU6 430 aaKnown RBP22.67■■□□□ 1.22
LINC01238-205ENST00000567549 CCL5P13501 91 aa22.66■■□□□ 1.22
LINC01238-205ENST00000567549 GJA8P48165 433 aa22.66■■□□□ 1.22
LINC01238-205ENST00000567549 HMGCS2P54868 508 aa22.66■■□□□ 1.22
LINC01238-205ENST00000567549 IRX3P78415 501 aaPredicted RBP22.66■■□□□ 1.22
LINC01238-205ENST00000567549 CEP85Q6P2H3 762 aa22.66■■□□□ 1.22
LINC01238-205ENST00000567549 ANKRD13CQ8N6S4 541 aa22.66■■□□□ 1.22
LINC01238-205ENST00000567549 GTF3C2Q8WUA4 911 aaPredicted RBP22.66■■□□□ 1.22
LINC01238-205ENST00000567549 USP5P45974 858 aa22.65■■□□□ 1.22
LINC01238-205ENST00000567549 FLT3LGP49771 235 aa22.65■■□□□ 1.22
LINC01238-205ENST00000567549 CCDC8Q9H0W5 538 aaPredicted RBP22.65■■□□□ 1.22
LINC01238-205ENST00000567549 DDX19BQ9UMR2 479 aa22.65■■□□□ 1.22
LINC01238-205ENST00000567549 RLBP1P12271 317 aa22.64■■□□□ 1.21
LINC01238-205ENST00000567549 BACE1P56817 501 aa22.64■■□□□ 1.21
LINC01238-205ENST00000567549 TREML2Q5T2D2 321 aa22.64■■□□□ 1.21
LINC01238-205ENST00000567549 TTC6Q86TZ1 520 aa22.64■■□□□ 1.21
LINC01238-205ENST00000567549 AACSQ86V21 672 aa22.64■■□□□ 1.21
LINC01238-205ENST00000567549 METTL16Q86W50 562 aaKnown RBP22.64■■□□□ 1.21
LINC01238-205ENST00000567549 RPAP2Q8IXW5 612 aaPredicted RBP22.64■■□□□ 1.21
LINC01238-205ENST00000567549 CLASRPQ8N2M8 674 aaKnown RBP22.64■■□□□ 1.21
LINC01238-205ENST00000567549 EAF2Q96CJ1 260 aaPredicted RBP22.64■■□□□ 1.21
LINC01238-205ENST00000567549 CDK5RAP2Q96SN8 1893 aa22.64■■□□□ 1.21
LINC01238-205ENST00000567549 USP17L10C9JJH3 530 aa22.63■■□□□ 1.21
LINC01238-205ENST00000567549 MTFR1Q15390 333 aa22.63■■□□□ 1.21
LINC01238-205ENST00000567549 PALD1Q9ULE6 856 aa22.63■■□□□ 1.21
LINC01238-205ENST00000567549 MTMR2Q13614 643 aa22.62■■□□□ 1.21
LINC01238-205ENST00000567549 CCDC84Q86UT8 332 aaPredicted RBP22.62■■□□□ 1.21
LINC01238-205ENST00000567549 KIF1BPQ96EK5 621 aa22.62■■□□□ 1.21
LINC01238-205ENST00000567549 ASCC2Q9H1I8 757 aaPredicted RBP22.62■■□□□ 1.21
LINC01238-205ENST00000567549 PIH1D3Q9NQM4 214 aaKnown RBP22.62■■□□□ 1.21
LINC01238-205ENST00000567549 MYH1P12882 1939 aa22.61■■□□□ 1.21
LINC01238-205ENST00000567549 HOXA7P31268 230 aaPredicted RBP22.61■■□□□ 1.21
LINC01238-205ENST00000567549 HABP4Q5JVS0 413 aaKnown RBP22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms