RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 DUSP27Q5VZP5 1158 aa8.56□□□□□ -1.04
UBR1-205ENST00000564540 OGFOD3Q6PK18 319 aa8.56□□□□□ -1.04
UBR1-205ENST00000564540 LRRC4CQ9HCJ2 640 aa8.56□□□□□ -1.04
UBR1-205ENST00000564540 TLR6Q9Y2C9 796 aa8.56□□□□□ -1.04
UBR1-205ENST00000564540 PRAMEF27A3QJZ7 478 aa8.55□□□□□ -1.04
UBR1-205ENST00000564540 CYP26A1O43174 497 aa8.55□□□□□ -1.04
UBR1-205ENST00000564540 ADAMTS4O75173 837 aa8.55□□□□□ -1.04
UBR1-205ENST00000564540 TFE3P19532 575 aaPredicted RBP8.55□□□□□ -1.04
UBR1-205ENST00000564540 MFAP1P55081 439 aaKnown RBP8.55□□□□□ -1.04
UBR1-205ENST00000564540 CPSF6Q16630 551 aaKnown RBP eCLIP8.55□□□□□ -1.04
UBR1-205ENST00000564540 NOC4LQ9BVI4 516 aaKnown RBP8.55□□□□□ -1.04
UBR1-205ENST00000564540 LEFTY1O75610 366 aa8.54□□□□□ -1.04
UBR1-205ENST00000564540 TAL1P17542 331 aaPredicted RBP8.54□□□□□ -1.04
UBR1-205ENST00000564540 LMNB1P20700 586 aa8.54□□□□□ -1.04
UBR1-205ENST00000564540 CYP27A1Q02318 531 aa8.54□□□□□ -1.04
UBR1-205ENST00000564540 TRIM26Q12899 539 aaPredicted RBP8.54□□□□□ -1.04
UBR1-205ENST00000564540 MSMPQ1L6U9 139 aa8.54□□□□□ -1.04
UBR1-205ENST00000564540 WIPI1Q5MNZ9 446 aaPredicted RBP8.54□□□□□ -1.04
UBR1-205ENST00000564540 DTX1Q86Y01 620 aa8.54□□□□□ -1.04
UBR1-205ENST00000564540 FANCGO15287 622 aa8.53□□□□□ -1.04
UBR1-205ENST00000564540 ZNF326Q5BKZ1 582 aaKnown RBP8.53□□□□□ -1.04
UBR1-205ENST00000564540 CYFIP1Q7L576 1253 aa8.53□□□□□ -1.04
UBR1-205ENST00000564540 HDXQ7Z353 690 aa8.53□□□□□ -1.04
UBR1-205ENST00000564540 PHC3Q8NDX5 983 aa8.53□□□□□ -1.04
UBR1-205ENST00000564540 DUSP23Q9BVJ7 150 aa8.52□□□□□ -1.05
UBR1-205ENST00000564540 MIR1-1HGQ9H1L0 117 aa8.52□□□□□ -1.05
UBR1-205ENST00000564540 RNF114Q9Y508 228 aa8.52□□□□□ -1.05
UBR1-205ENST00000564540 OAS3Q9Y6K5 1087 aaKnown RBP8.52□□□□□ -1.05
UBR1-205ENST00000564540 CDC37L1Q7L3B6 337 aa8.51□□□□□ -1.05
UBR1-205ENST00000564540 TOP6BLQ8N6T0 577 aa8.51□□□□□ -1.05
UBR1-205ENST00000564540 JARID2Q92833 1246 aaPredicted RBP8.51□□□□□ -1.05
UBR1-205ENST00000564540 FBRSQ9HAH7 460 aa8.51□□□□□ -1.05
UBR1-205ENST00000564540 ZC3H7BQ9UGR2 993 aaKnown RBP8.51□□□□□ -1.05
UBR1-205ENST00000564540 U3KQE9 123 aa8.51□□□□□ -1.05
UBR1-205ENST00000564540 RLBP1P12271 317 aa8.5□□□□□ -1.05
UBR1-205ENST00000564540 ZNF16P17020 682 aaPredicted RBP8.5□□□□□ -1.05
UBR1-205ENST00000564540 MRPL58Q14197 206 aaKnown RBP8.5□□□□□ -1.05
UBR1-205ENST00000564540 CYP27C1Q4G0S4 372 aa8.5□□□□□ -1.05
UBR1-205ENST00000564540 FAM181AQ8N9Y4 354 aa8.5□□□□□ -1.05
UBR1-205ENST00000564540 SNCAIPQ9Y6H5 919 aa8.5□□□□□ -1.05
UBR1-205ENST00000564540 GFRA2O00451 464 aa8.49□□□□□ -1.05
UBR1-205ENST00000564540 ETF1P62495 437 aaKnown RBP8.49□□□□□ -1.05
UBR1-205ENST00000564540 ZNF507Q8TCN5 953 aa8.49□□□□□ -1.05
UBR1-205ENST00000564540 WNT10AQ9GZT5 417 aa8.49□□□□□ -1.05
UBR1-205ENST00000564540 GRK4P32298 578 aa8.48□□□□□ -1.05
UBR1-205ENST00000564540 GP2P55259 537 aaKnown RBP8.48□□□□□ -1.05
UBR1-205ENST00000564540 NKG7Q16617 165 aa8.48□□□□□ -1.05
UBR1-205ENST00000564540 TSNAXIP1Q2TAA8 658 aa8.48□□□□□ -1.05
UBR1-205ENST00000564540 BNC2Q6ZN30 1099 aaPredicted RBP8.48□□□□□ -1.05
UBR1-205ENST00000564540 ARMCX6Q7L4S7 300 aa8.48□□□□□ -1.05
UBR1-205ENST00000564540 PF4P02776 101 aa8.47□□□□□ -1.05
UBR1-205ENST00000564540 GBP2P32456 591 aaPredicted RBP8.47□□□□□ -1.05
UBR1-205ENST00000564540 ITGAEP38570 1179 aa8.47□□□□□ -1.05
UBR1-205ENST00000564540 CAMK2GQ13555 558 aaPredicted RBP8.47□□□□□ -1.05
UBR1-205ENST00000564540 RHOVQ96L33 236 aa8.47□□□□□ -1.05
UBR1-205ENST00000564540 TMEM74Q96NL1 305 aa8.47□□□□□ -1.05
UBR1-205ENST00000564540 COPRSQ9NQ92 184 aa8.47□□□□□ -1.05
UBR1-205ENST00000564540 PRDM10Q9NQV6 1147 aa8.47□□□□□ -1.05
UBR1-205ENST00000564540 CCDC39Q9UFE4 941 aa8.47□□□□□ -1.05
UBR1-205ENST00000564540 MINDY4BA8MYZ0 360 aa8.46□□□□□ -1.06
UBR1-205ENST00000564540 WNT11O96014 354 aa8.46□□□□□ -1.06
UBR1-205ENST00000564540 RPL6Q02878 288 aaKnown RBP8.46□□□□□ -1.06
UBR1-205ENST00000564540 FAM160A1Q05DH4 1040 aa8.46□□□□□ -1.06
UBR1-205ENST00000564540 SLBPQ14493 270 aaKnown RBP eCLIP8.46□□□□□ -1.06
UBR1-205ENST00000564540 RELL1Q8IUW5 271 aa8.46□□□□□ -1.06
UBR1-205ENST00000564540 PLD6Q8N2A8 252 aaKnown RBP8.46□□□□□ -1.06
UBR1-205ENST00000564540 KCT2Q8NC54 265 aa8.46□□□□□ -1.06
UBR1-205ENST00000564540 HEXIM2Q96MH2 286 aaKnown RBP8.46□□□□□ -1.06
UBR1-205ENST00000564540 RSRP1Q9BUV0 290 aa8.46□□□□□ -1.06
UBR1-205ENST00000564540 BSDC1Q9NW68 430 aaPredicted RBP8.46□□□□□ -1.06
UBR1-205ENST00000564540 F13A1P00488 732 aa8.45□□□□□ -1.06
UBR1-205ENST00000564540 LMNB2Q03252 620 aa8.45□□□□□ -1.06
UBR1-205ENST00000564540 NFXL1Q6ZNB6 911 aa8.45□□□□□ -1.06
UBR1-205ENST00000564540 FAM214BQ7L5A3 538 aa8.45□□□□□ -1.06
UBR1-205ENST00000564540 KBTBD4Q9NVX7 518 aa8.45□□□□□ -1.06
UBR1-205ENST00000564540 ANGEL1Q9UNK9 670 aaKnown RBP8.45□□□□□ -1.06
UBR1-205ENST00000564540 FAM221AA4D161 298 aa8.44□□□□□ -1.06
UBR1-205ENST00000564540 LRIG2O94898 1065 aa8.44□□□□□ -1.06
UBR1-205ENST00000564540 PRNPP04156 253 aa8.44□□□□□ -1.06
UBR1-205ENST00000564540 ERMP1Q7Z2K6 904 aa8.44□□□□□ -1.06
UBR1-205ENST00000564540 HID1Q8IV36 788 aa8.44□□□□□ -1.06
UBR1-205ENST00000564540 KRTAP4-2Q9BYR5 136 aa8.44□□□□□ -1.06
UBR1-205ENST00000564540 FOXQ1Q9C009 403 aa8.44□□□□□ -1.06
UBR1-205ENST00000564540 RBAK-RBAKDNI3L0D1 243 aa8.43□□□□□ -1.06
UBR1-205ENST00000564540 CILPO75339 1184 aa8.43□□□□□ -1.06
UBR1-205ENST00000564540 SLITRK5O94991 958 aa8.43□□□□□ -1.06
UBR1-205ENST00000564540 EOMESO95936 686 aa8.43□□□□□ -1.06
UBR1-205ENST00000564540 LDLRAD1Q5T700 205 aa8.43□□□□□ -1.06
UBR1-205ENST00000564540 PRAMEF13Q5VWM6 474 aa8.43□□□□□ -1.06
UBR1-205ENST00000564540 CCDC84Q86UT8 332 aaPredicted RBP8.43□□□□□ -1.06
UBR1-205ENST00000564540 VSIG10LQ86VR7 867 aa8.43□□□□□ -1.06
UBR1-205ENST00000564540 DPH2Q9BQC3 489 aaPredicted RBP8.43□□□□□ -1.06
UBR1-205ENST00000564540 CORINQ9Y5Q5 1042 aa8.43□□□□□ -1.06
UBR1-205ENST00000564540 PGRP06401 933 aa8.42□□□□□ -1.06
UBR1-205ENST00000564540 ITIH2P19823 946 aa8.42□□□□□ -1.06
UBR1-205ENST00000564540 OXCT1P55809 520 aa8.42□□□□□ -1.06
UBR1-205ENST00000564540 PWP1Q13610 501 aa8.42□□□□□ -1.06
UBR1-205ENST00000564540 ARHGAP27Q6ZUM4 889 aa8.42□□□□□ -1.06
UBR1-205ENST00000564540 GOLM1Q8NBJ4 401 aa8.42□□□□□ -1.06
UBR1-205ENST00000564540 NETO1Q8TDF5 533 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms