RNA–Protein interactions for RNA: ENST00000564269.1

AC055855.3-201, humanhuman

TSL 2 BASIC

Gene AC055855.3, Length 578 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.3-201ENST00000564269 RTKN2Q8IZC4 609 aa7.04□□□□□ -1.28
AC055855.3-201ENST00000564269 ZDHHC1Q8WTX9 485 aa7.04□□□□□ -1.28
AC055855.3-201ENST00000564269 KRTAP4-6Q9BYQ5 205 aa7.04□□□□□ -1.28
AC055855.3-201ENST00000564269 ZDHHC3Q9NYG2 299 aa7.04□□□□□ -1.28
AC055855.3-201ENST00000564269 SCHIP1Q9P0W5 487 aaPredicted RBP7.04□□□□□ -1.28
AC055855.3-201ENST00000564269 ZNF652Q9Y2D9 606 aa7.04□□□□□ -1.28
AC055855.3-201ENST00000564269 UBR2Q8IWV8 1755 aa7.04□□□□□ -1.28
AC055855.3-201ENST00000564269 RNF123Q5XPI4 1314 aa7.03□□□□□ -1.28
AC055855.3-201ENST00000564269 WDR33Q9C0J8 1336 aaKnown RBP7.03□□□□□ -1.28
AC055855.3-201ENST00000564269 ANKRD31Q8N7Z5 1873 aa7.03□□□□□ -1.28
AC055855.3-201ENST00000564269 NEURL1BA8MQ27 555 aa7.03□□□□□ -1.28
AC055855.3-201ENST00000564269 KHNYNO15037 678 aaKnown RBP7.03□□□□□ -1.28
AC055855.3-201ENST00000564269 MAPTP10636 758 aaKnown RBP7.03□□□□□ -1.28
AC055855.3-201ENST00000564269 HSPA8P11142 646 aaKnown RBP7.03□□□□□ -1.28
AC055855.3-201ENST00000564269 HOXB4P17483 251 aaPredicted RBP7.03□□□□□ -1.28
AC055855.3-201ENST00000564269 AMPD1P23109 780 aa7.03□□□□□ -1.28
AC055855.3-201ENST00000564269 ALDH1B1P30837 517 aa7.03□□□□□ -1.28
AC055855.3-201ENST00000564269 PRKAR2BP31323 418 aa7.03□□□□□ -1.28
AC055855.3-201ENST00000564269 TXLNAP40222 546 aa7.03□□□□□ -1.28
AC055855.3-201ENST00000564269 IARSP41252 1262 aaKnown RBP7.03□□□□□ -1.28
AC055855.3-201ENST00000564269 TNP2Q05952 138 aa7.03□□□□□ -1.28
AC055855.3-201ENST00000564269 FLIIQ13045 1269 aa7.03□□□□□ -1.28
AC055855.3-201ENST00000564269 HLFQ16534 295 aa7.03□□□□□ -1.28
AC055855.3-201ENST00000564269 GPC2Q8N158 579 aa7.03□□□□□ -1.28
AC055855.3-201ENST00000564269 SYNE4Q8N205 404 aa7.03□□□□□ -1.28
AC055855.3-201ENST00000564269 UCN2Q96RP3 112 aa7.03□□□□□ -1.28
AC055855.3-201ENST00000564269 PSMD1Q99460 953 aa7.03□□□□□ -1.28
AC055855.3-201ENST00000564269 MKL2Q9ULH7 1088 aa7.03□□□□□ -1.28
AC055855.3-201ENST00000564269 NIP7Q9Y221 180 aaKnown RBP eCLIP7.03□□□□□ -1.28
AC055855.3-201ENST00000564269 COL11A2P13942 1736 aaPredicted RBP7.03□□□□□ -1.28
AC055855.3-201ENST00000564269 SCN7AQ01118 1682 aa7.03□□□□□ -1.28
AC055855.3-201ENST00000564269 FER1L6Q2WGJ9 1857 aa7.02□□□□□ -1.28
AC055855.3-201ENST00000564269 SNED1Q8TER0 1413 aa7.02□□□□□ -1.29
AC055855.3-201ENST00000564269 FAM177BA6PVY3 158 aa7.02□□□□□ -1.29
AC055855.3-201ENST00000564269 ARAFP10398 606 aa7.02□□□□□ -1.29
AC055855.3-201ENST00000564269 EPXP11678 715 aa7.02□□□□□ -1.29
AC055855.3-201ENST00000564269 EPHA4P54764 986 aa7.02□□□□□ -1.29
AC055855.3-201ENST00000564269 MAP2K1Q02750 393 aaPredicted RBP7.02□□□□□ -1.29
AC055855.3-201ENST00000564269 CRY2Q49AN0 593 aa7.02□□□□□ -1.29
AC055855.3-201ENST00000564269 HDGFL1Q5TGJ6 251 aa7.02□□□□□ -1.29
AC055855.3-201ENST00000564269 MCM10Q7L590 875 aa7.02□□□□□ -1.29
AC055855.3-201ENST00000564269 ABHD8Q96I13 439 aa7.02□□□□□ -1.29
AC055855.3-201ENST00000564269 DDX21Q9NR30 783 aaKnown RBP eCLIP7.02□□□□□ -1.29
AC055855.3-201ENST00000564269 KIAA1024Q9UPX6 916 aa7.02□□□□□ -1.29
AC055855.3-201ENST00000564269 NPC1L1Q9UHC9 1359 aa7.02□□□□□ -1.29
AC055855.3-201ENST00000564269 SLX4Q8IY92 1834 aa7.01□□□□□ -1.29
AC055855.3-201ENST00000564269 USP17L3A6NCW0 530 aa7.01□□□□□ -1.29
AC055855.3-201ENST00000564269 USP17L4A6NCW7 530 aa7.01□□□□□ -1.29
AC055855.3-201ENST00000564269 COL8A1P27658 744 aa7.01□□□□□ -1.29
AC055855.3-201ENST00000564269 FMR1Q06787 632 aaKnown RBP eCLIP7.01□□□□□ -1.29
AC055855.3-201ENST00000564269 CNGB1Q14028 1251 aaPredicted RBP7.01□□□□□ -1.29
AC055855.3-201ENST00000564269 USP17L2Q6R6M4 530 aa7.01□□□□□ -1.29
AC055855.3-201ENST00000564269 USP17L1Q7RTZ2 530 aa7.01□□□□□ -1.29
AC055855.3-201ENST00000564269 SLC9A9Q8IVB4 645 aa7.01□□□□□ -1.29
AC055855.3-201ENST00000564269 JDP2Q8WYK2 163 aa7.01□□□□□ -1.29
AC055855.3-201ENST00000564269 SPOCK3Q9BQ16 436 aa7.01□□□□□ -1.29
AC055855.3-201ENST00000564269 KLF15Q9UIH9 416 aa7.01□□□□□ -1.29
AC055855.3-201ENST00000564269 ABT1Q9ULW3 272 aaKnown RBP7.01□□□□□ -1.29
AC055855.3-201ENST00000564269 GJA3Q9Y6H8 435 aa7.01□□□□□ -1.29
AC055855.3-201ENST00000564269 ADAMTSL1Q8N6G6 1762 aa7□□□□□ -1.29
AC055855.3-201ENST00000564269 MSTNO14793 375 aa7□□□□□ -1.29
AC055855.3-201ENST00000564269 ZBTB7BO15156 539 aaPredicted RBP7□□□□□ -1.29
AC055855.3-201ENST00000564269 HTATSF1O43719 755 aaKnown RBP7□□□□□ -1.29
AC055855.3-201ENST00000564269 FAM157BP0CG42 384 aa7□□□□□ -1.29
AC055855.3-201ENST00000564269 HOXA10P31260 410 aaPredicted RBP7□□□□□ -1.29
AC055855.3-201ENST00000564269 EPS15P42566 896 aa7□□□□□ -1.29
AC055855.3-201ENST00000564269 EIF6P56537 245 aaKnown RBP7□□□□□ -1.29
AC055855.3-201ENST00000564269 DCTN1Q14203 1278 aa7□□□□□ -1.29
AC055855.3-201ENST00000564269 TEAD4Q15561 434 aa7□□□□□ -1.29
AC055855.3-201ENST00000564269 SH3PXD2AQ5TCZ1 1133 aa7□□□□□ -1.29
AC055855.3-201ENST00000564269 CST9Q5W186 159 aa7□□□□□ -1.29
AC055855.3-201ENST00000564269 LINC00114Q6XXX2 140 aa7□□□□□ -1.29
AC055855.3-201ENST00000564269 USP50Q70EL3 339 aaPredicted RBP7□□□□□ -1.29
AC055855.3-201ENST00000564269 SLC51AQ86UW1 340 aa7□□□□□ -1.29
AC055855.3-201ENST00000564269 TPCN2Q8NHX9 752 aa7□□□□□ -1.29
AC055855.3-201ENST00000564269 RTF1Q92541 710 aaKnown RBP7□□□□□ -1.29
AC055855.3-201ENST00000564269 BTBD6Q96KE9 485 aa7□□□□□ -1.29
AC055855.3-201ENST00000564269 GPR101Q96P66 508 aaPredicted RBP7□□□□□ -1.29
AC055855.3-201ENST00000564269 SUV39H2Q9H5I1 410 aa7□□□□□ -1.29
AC055855.3-201ENST00000564269 ABCC12Q96J65 1359 aa6.99□□□□□ -1.29
AC055855.3-201ENST00000564269 KRBA1A5PL33 1030 aa6.99□□□□□ -1.29
AC055855.3-201ENST00000564269 ERVV-1B6SEH8 477 aa6.99□□□□□ -1.29
AC055855.3-201ENST00000564269 LMOD1P29536 600 aaPredicted RBP6.99□□□□□ -1.29
AC055855.3-201ENST00000564269 NOS2P35228 1153 aa6.99□□□□□ -1.29
AC055855.3-201ENST00000564269 RGS19P49795 217 aa6.99□□□□□ -1.29
AC055855.3-201ENST00000564269 CLDN10P78369 228 aa6.99□□□□□ -1.29
AC055855.3-201ENST00000564269 TAF7Q15545 349 aaPredicted RBP6.99□□□□□ -1.29
AC055855.3-201ENST00000564269 CYP4F22Q6NT55 531 aa6.99□□□□□ -1.29
AC055855.3-201ENST00000564269 FCHSD1Q86WN1 690 aa6.99□□□□□ -1.29
AC055855.3-201ENST00000564269 TRIM50Q86XT4 487 aa6.99□□□□□ -1.29
AC055855.3-201ENST00000564269 PLEKHM2Q8IWE5 1019 aa6.99□□□□□ -1.29
AC055855.3-201ENST00000564269 CAPNS2Q96L46 248 aa6.99□□□□□ -1.29
AC055855.3-201ENST00000564269 NYXQ9GZU5 481 aa6.99□□□□□ -1.29
AC055855.3-201ENST00000564269 MIS18AQ9NYP9 233 aa6.99□□□□□ -1.29
AC055855.3-201ENST00000564269 ZNF232Q9UNY5 417 aa6.99□□□□□ -1.29
AC055855.3-201ENST00000564269 COL4A5P29400 1685 aa6.99□□□□□ -1.29
AC055855.3-201ENST00000564269 DICER1Q9UPY3 1922 aaKnown RBP6.98□□□□□ -1.29
AC055855.3-201ENST00000564269 TRAF5O00463 557 aa6.98□□□□□ -1.29
AC055855.3-201ENST00000564269 ATP9BO43861 1147 aa6.98□□□□□ -1.29
AC055855.3-201ENST00000564269 PROCP04070 461 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms