RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 PRRT2Q7Z6L0 340 aaPredicted RBP21.38■■□□□ 1.01
SMAD3-210ENST00000559092 DCTPP1Q9H773 170 aa21.38■■□□□ 1.01
SMAD3-210ENST00000559092 CAP2P40123 477 aa21.37■■□□□ 1.01
SMAD3-210ENST00000559092 RRP1P56182 461 aaKnown RBP21.37■■□□□ 1.01
SMAD3-210ENST00000559092 SLC9C2Q5TAH2 1124 aa21.37■■□□□ 1.01
SMAD3-210ENST00000559092 CD99L2Q8TCZ2 262 aa21.37■■□□□ 1.01
SMAD3-210ENST00000559092 EFCC1Q9HA90 598 aa21.37■■□□□ 1.01
SMAD3-210ENST00000559092 GOLIM4O00461 696 aa21.36■■□□□ 1.01
SMAD3-210ENST00000559092 MIGA1Q8NAN2 632 aa21.36■■□□□ 1.01
SMAD3-210ENST00000559092 DNAJC2Q99543 621 aaKnown RBP21.36■■□□□ 1.01
SMAD3-210ENST00000559092 HAUS7Q99871 368 aa21.36■■□□□ 1.01
SMAD3-210ENST00000559092 PALD1Q9ULE6 856 aa21.36■■□□□ 1.01
SMAD3-210ENST00000559092 SLC45A1Q9Y2W3 748 aa21.36■■□□□ 1.01
SMAD3-210ENST00000559092 FAM196BA6NMK8 535 aa21.35■■□□□ 1.01
SMAD3-210ENST00000559092 HLA-DOAP06340 250 aa21.35■■□□□ 1.01
SMAD3-210ENST00000559092 PDE6AP16499 860 aa21.35■■□□□ 1.01
SMAD3-210ENST00000559092 USP5P45974 858 aa21.35■■□□□ 1.01
SMAD3-210ENST00000559092 GPAT2Q6NUI2 795 aa21.35■■□□□ 1.01
SMAD3-210ENST00000559092 RIOK1Q9BRS2 568 aaKnown RBP21.35■■□□□ 1.01
SMAD3-210ENST00000559092 BCL11AQ9H165 835 aa21.35■■□□□ 1.01
SMAD3-210ENST00000559092 GINM1Q9NU53 330 aa21.35■■□□□ 1.01
SMAD3-210ENST00000559092 PAG1Q9NWQ8 432 aa21.35■■□□□ 1.01
SMAD3-210ENST00000559092 PTPN22Q9Y2R2 807 aa21.35■■□□□ 1.01
SMAD3-210ENST00000559092 C17orf99Q6UX52 265 aa21.34■■□□□ 1.01
SMAD3-210ENST00000559092 CRACR2BQ8N4Y2 399 aaPredicted RBP21.34■■□□□ 1.01
SMAD3-210ENST00000559092 PARK7Q99497 189 aaKnown RBP21.34■■□□□ 1.01
SMAD3-210ENST00000559092 TRIM34Q9BYJ4 488 aa21.34■■□□□ 1.01
SMAD3-210ENST00000559092 BOLA2Q9H3K6 86 aa21.34■■□□□ 1.01
SMAD3-210ENST00000559092 AK9Q5TCS8 1911 aa21.33■■□□□ 1.01
SMAD3-210ENST00000559092 MAGEB6P1A0A0J9YX57 407 aa21.33■■□□□ 1.01
SMAD3-210ENST00000559092 TRIM75PA6NK02 468 aa21.33■■□□□ 1.01
SMAD3-210ENST00000559092 USP17L5A8MUK1 530 aa21.33■■□□□ 1.01
SMAD3-210ENST00000559092 GNRH1P01148 92 aa21.33■■□□□ 1.01
SMAD3-210ENST00000559092 KIF22Q14807 665 aa21.33■■□□□ 1.01
SMAD3-210ENST00000559092 ZNF280CQ8ND82 737 aa21.33■■□□□ 1.01
SMAD3-210ENST00000559092 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.33■■□□□ 1.01
SMAD3-210ENST00000559092 MAST2Q6P0Q8 1798 aa21.33■■□□□ 1
SMAD3-210ENST00000559092 ZNF532Q9HCE3 1301 aa21.32■■□□□ 1
SMAD3-210ENST00000559092 TCRBV5S4A2TA0A5A2 114 aa21.32■■□□□ 1
SMAD3-210ENST00000559092 ASNSP08243 561 aa21.32■■□□□ 1
SMAD3-210ENST00000559092 LACTBP83111 547 aaPredicted RBP21.32■■□□□ 1
SMAD3-210ENST00000559092 RRP1BQ14684 758 aaKnown RBP21.32■■□□□ 1
SMAD3-210ENST00000559092 TTC6Q86TZ1 520 aa21.32■■□□□ 1
SMAD3-210ENST00000559092 YTHDC1Q96MU7 727 aaKnown RBP21.32■■□□□ 1
SMAD3-210ENST00000559092 EHD4Q9H223 541 aa21.32■■□□□ 1
SMAD3-210ENST00000559092 AS3MTQ9HBK9 375 aa21.32■■□□□ 1
SMAD3-210ENST00000559092 ECHDC1Q9NTX5 307 aa21.32■■□□□ 1
SMAD3-210ENST00000559092 SAP30BPQ9UHR5 308 aaKnown RBP21.32■■□□□ 1
SMAD3-210ENST00000559092 PCDHB15Q9Y5E8 787 aa21.32■■□□□ 1
SMAD3-210ENST00000559092 SMARCA5O60264 1052 aaPredicted RBP21.31■■□□□ 1
SMAD3-210ENST00000559092 SPP2Q13103 211 aa21.31■■□□□ 1
SMAD3-210ENST00000559092 GADL1Q6ZQY3 521 aa21.31■■□□□ 1
SMAD3-210ENST00000559092 PROCA1Q8NCQ7 364 aaPredicted RBP21.31■■□□□ 1
SMAD3-210ENST00000559092 WDR18Q9BV38 432 aa21.31■■□□□ 1
SMAD3-210ENST00000559092 CRNKL1Q9BZJ0 848 aaKnown RBP21.31■■□□□ 1
SMAD3-210ENST00000559092 DNAJC18Q9H819 358 aa21.31■■□□□ 1
SMAD3-210ENST00000559092 DOCK2Q92608 1830 aa21.31■■□□□ 1
SMAD3-210ENST00000559092 ADGRA2Q96PE1 1338 aa21.3■■□□□ 1
SMAD3-210ENST00000559092 CAP1Q01518 475 aa21.3■■□□□ 1
SMAD3-210ENST00000559092 MLLT1Q03111 559 aaPredicted RBP21.3■■□□□ 1
SMAD3-210ENST00000559092 EDC3Q96F86 508 aaKnown RBP21.3■■□□□ 1
SMAD3-210ENST00000559092 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.3■■□□□ 1
SMAD3-210ENST00000559092 CPA4Q9UI42 421 aa21.3■■□□□ 1
SMAD3-210ENST00000559092 SERPINB13Q9UIV8 391 aa21.3■■□□□ 1
SMAD3-210ENST00000559092 AGTPBP1Q9UPW5 1226 aa21.3■■□□□ 1
SMAD3-210ENST00000559092 PRMT2P55345 433 aa21.29■■□□□ 1
SMAD3-210ENST00000559092 TATDN1Q6P1N9 297 aa21.29■■□□□ 1
SMAD3-210ENST00000559092 GPATCH3Q96I76 525 aa21.29■■□□□ 1
SMAD3-210ENST00000559092 CYP2C8P10632 490 aa21.28■■□□□ 1
SMAD3-210ENST00000559092 BCRP11274 1271 aa21.28■■□□□ 1
SMAD3-210ENST00000559092 ADD2P35612 726 aa21.28■■□□□ 1
SMAD3-210ENST00000559092 AAMPQ13685 434 aa21.28■■□□□ 1
SMAD3-210ENST00000559092 UBE3CQ15386 1083 aa21.28■■□□□ 1
SMAD3-210ENST00000559092 SH3D19Q5HYK7 790 aa21.28■■□□□ 1
SMAD3-210ENST00000559092 ZSCAN25Q6NSZ9 544 aa21.28■■□□□ 1
SMAD3-210ENST00000559092 CCDC84Q86UT8 332 aaPredicted RBP21.28■■□□□ 1
SMAD3-210ENST00000559092 TAOK2Q9UL54 1235 aa21.28■■□□□ 1
SMAD3-210ENST00000559092 SOX10P56693 466 aa21.27■■□□□ 1
SMAD3-210ENST00000559092 PABPC4Q13310 644 aaKnown RBP eCLIP21.27■■□□□ 1
SMAD3-210ENST00000559092 ARMC5Q96C12 935 aa21.27■■□□□ 1
SMAD3-210ENST00000559092 PNMA3Q9UL41 463 aa21.27■■□□□ 1
SMAD3-210ENST00000559092 HTTP42858 3142 aa21.27■□□□□ 0.99
SMAD3-210ENST00000559092 C19orf81C9J6K1 198 aa21.26■□□□□ 0.99
SMAD3-210ENST00000559092 POLR3DP05423 398 aaPredicted RBP21.26■□□□□ 0.99
SMAD3-210ENST00000559092 HOXD10P28358 340 aa21.26■□□□□ 0.99
SMAD3-210ENST00000559092 BACE1P56817 501 aa21.26■□□□□ 0.99
SMAD3-210ENST00000559092 ARHGAP39Q9C0H5 1083 aa21.26■□□□□ 0.99
SMAD3-210ENST00000559092 PSMC4P43686 418 aa21.25■□□□□ 0.99
SMAD3-210ENST00000559092 HMGCS2P54868 508 aa21.25■□□□□ 0.99
SMAD3-210ENST00000559092 JAG1P78504 1218 aa21.25■□□□□ 0.99
SMAD3-210ENST00000559092 NBPF11Q86T75 865 aa21.25■□□□□ 0.99
SMAD3-210ENST00000559092 LCORLQ8N3X6 602 aa21.25■□□□□ 0.99
SMAD3-210ENST00000559092 CRBNQ96SW2 442 aa21.25■□□□□ 0.99
SMAD3-210ENST00000559092 ATP8A2Q9NTI2 1148 aa21.25■□□□□ 0.99
SMAD3-210ENST00000559092 MCM9Q9NXL9 1143 aa21.25■□□□□ 0.99
SMAD3-210ENST00000559092 ZBTB21Q9ULJ3 1066 aa21.25■□□□□ 0.99
SMAD3-210ENST00000559092 PLCD1P51178 756 aa21.24■□□□□ 0.99
SMAD3-210ENST00000559092 SLC4A8Q2Y0W8 1093 aa21.24■□□□□ 0.99
SMAD3-210ENST00000559092 CERKLQ49MI3 558 aaPredicted RBP21.24■□□□□ 0.99
SMAD3-210ENST00000559092 TREML2Q5T2D2 321 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms