RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 MAST2Q6P0Q8 1798 aa13.05□□□□□ -0.32
TRAV33-201ENST00000557514 DDTLA6NHG4 134 aaPredicted RBP13.05□□□□□ -0.32
TRAV33-201ENST00000557514 ALDH1L1O75891 902 aa13.05□□□□□ -0.32
TRAV33-201ENST00000557514 IFIT1P09914 478 aaKnown RBP13.05□□□□□ -0.32
TRAV33-201ENST00000557514 ZNF280CQ8ND82 737 aa13.05□□□□□ -0.32
TRAV33-201ENST00000557514 XIRP2A4UGR9 3374 aa13.05□□□□□ -0.32
TRAV33-201ENST00000557514 SALL1Q9NSC2 1324 aa13.05□□□□□ -0.32
TRAV33-201ENST00000557514 PTPRFP10586 1907 aa13.05□□□□□ -0.32
TRAV33-201ENST00000557514 ZEB1P37275 1124 aaPredicted RBP13.04□□□□□ -0.32
TRAV33-201ENST00000557514 HMGCS2P54868 508 aa13.04□□□□□ -0.32
TRAV33-201ENST00000557514 SPP2Q13103 211 aa13.04□□□□□ -0.32
TRAV33-201ENST00000557514 CCL14Q16627 93 aa13.04□□□□□ -0.32
TRAV33-201ENST00000557514 CCDC27Q2M243 656 aa13.04□□□□□ -0.32
TRAV33-201ENST00000557514 SH3D19Q5HYK7 790 aa13.04□□□□□ -0.32
TRAV33-201ENST00000557514 ZSCAN29Q8IWY8 852 aaPredicted RBP13.04□□□□□ -0.32
TRAV33-201ENST00000557514 APBA2Q99767 749 aa13.04□□□□□ -0.32
TRAV33-201ENST00000557514 TBC1D2Q9BYX2 928 aa13.04□□□□□ -0.32
TRAV33-201ENST00000557514 SENP6Q9GZR1 1112 aaPredicted RBP13.04□□□□□ -0.32
TRAV33-201ENST00000557514 BICC1Q9H694 974 aaKnown RBP13.04□□□□□ -0.32
TRAV33-201ENST00000557514 DDX4Q9NQI0 724 aaKnown RBP13.04□□□□□ -0.32
TRAV33-201ENST00000557514 PRKAG2Q9UGJ0 569 aa13.04□□□□□ -0.32
TRAV33-201ENST00000557514 DOCK3Q8IZD9 2030 aa13.04□□□□□ -0.32
TRAV33-201ENST00000557514 UTYO14607 1347 aa13.04□□□□□ -0.32
TRAV33-201ENST00000557514 LOC285556D6RIA3 1793 aa13.04□□□□□ -0.32
TRAV33-201ENST00000557514 TBC1D12O60347 775 aa13.03□□□□□ -0.32
TRAV33-201ENST00000557514 LDHBP07195 334 aaKnown RBP13.03□□□□□ -0.32
TRAV33-201ENST00000557514 RTP1P59025 263 aa13.03□□□□□ -0.32
TRAV33-201ENST00000557514 PDE3AQ14432 1141 aa13.03□□□□□ -0.32
TRAV33-201ENST00000557514 ANKRD44Q8N8A2 993 aa13.03□□□□□ -0.32
TRAV33-201ENST00000557514 TXNRD2Q9NNW7 524 aa13.03□□□□□ -0.32
TRAV33-201ENST00000557514 DOCK2Q92608 1830 aa13.03□□□□□ -0.32
TRAV33-201ENST00000557514 IL16Q14005 1332 aa13.03□□□□□ -0.32
TRAV33-201ENST00000557514 FANCIQ9NVI1 1328 aa13.03□□□□□ -0.32
TRAV33-201ENST00000557514 DOCK1Q14185 1865 aa13.03□□□□□ -0.32
TRAV33-201ENST00000557514 DNM1LO00429 736 aa13.02□□□□□ -0.33
TRAV33-201ENST00000557514 VAMP4O75379 141 aa13.02□□□□□ -0.33
TRAV33-201ENST00000557514 NBPF7P0C2Y1 421 aaPredicted RBP13.02□□□□□ -0.33
TRAV33-201ENST00000557514 MAPK4P31152 587 aa13.02□□□□□ -0.33
TRAV33-201ENST00000557514 RGS2P41220 211 aa13.02□□□□□ -0.33
TRAV33-201ENST00000557514 ATN1P54259 1190 aaPredicted RBP13.02□□□□□ -0.33
TRAV33-201ENST00000557514 MORN1Q5T089 497 aa13.02□□□□□ -0.33
TRAV33-201ENST00000557514 WWC1Q8IX03 1113 aa13.02□□□□□ -0.33
TRAV33-201ENST00000557514 LPIN2Q92539 896 aa13.02□□□□□ -0.33
TRAV33-201ENST00000557514 OSBPL5Q9H0X9 879 aaPredicted RBP13.02□□□□□ -0.33
TRAV33-201ENST00000557514 PLXNB2O15031 1838 aa13.02□□□□□ -0.33
TRAV33-201ENST00000557514 LTBP2Q14767 1821 aa13.02□□□□□ -0.33
TRAV33-201ENST00000557514 PHIPQ8WWQ0 1821 aa13.02□□□□□ -0.33
TRAV33-201ENST00000557514 CHD9Q3L8U1 2897 aa13.01□□□□□ -0.33
TRAV33-201ENST00000557514 FAM196BA6NMK8 535 aa13.01□□□□□ -0.33
TRAV33-201ENST00000557514 PEX10O60683 326 aa13.01□□□□□ -0.33
TRAV33-201ENST00000557514 SLC5A1P13866 664 aa13.01□□□□□ -0.33
TRAV33-201ENST00000557514 HERVK_113P62684 666 aa13.01□□□□□ -0.33
TRAV33-201ENST00000557514 IRX3P78415 501 aaPredicted RBP13.01□□□□□ -0.33
TRAV33-201ENST00000557514 MAP3K12Q12852 859 aa13.01□□□□□ -0.33
TRAV33-201ENST00000557514 GPR142Q7Z601 462 aa13.01□□□□□ -0.33
TRAV33-201ENST00000557514 GPRC5AQ8NFJ5 357 aa13.01□□□□□ -0.33
TRAV33-201ENST00000557514 KLHDC4Q8TBB5 520 aa13.01□□□□□ -0.33
TRAV33-201ENST00000557514 LPAR1Q92633 364 aa13.01□□□□□ -0.33
TRAV33-201ENST00000557514 SRCIN1Q9C0H9 1055 aa13.01□□□□□ -0.33
TRAV33-201ENST00000557514 PORCNQ9H237 461 aa13.01□□□□□ -0.33
TRAV33-201ENST00000557514 DDX20Q9UHI6 824 aaKnown RBP13.01□□□□□ -0.33
TRAV33-201ENST00000557514 SYNGAP1Q96PV0 1343 aa13□□□□□ -0.33
TRAV33-201ENST00000557514 ZBTB22O15209 634 aa13□□□□□ -0.33
TRAV33-201ENST00000557514 MSCO60682 206 aa13□□□□□ -0.33
TRAV33-201ENST00000557514 HOXA7P31268 230 aaPredicted RBP13□□□□□ -0.33
TRAV33-201ENST00000557514 PICALMQ13492 652 aa13□□□□□ -0.33
TRAV33-201ENST00000557514 GRIN2CQ14957 1233 aa13□□□□□ -0.33
TRAV33-201ENST00000557514 SNX17Q15036 470 aa13□□□□□ -0.33
TRAV33-201ENST00000557514 ATXN2LQ8WWM7 1075 aaKnown RBP13□□□□□ -0.33
TRAV33-201ENST00000557514 BADQ92934 168 aa13□□□□□ -0.33
TRAV33-201ENST00000557514 PDLIM7Q9NR12 457 aa13□□□□□ -0.33
TRAV33-201ENST00000557514 USP17L5A8MUK1 530 aa12.99□□□□□ -0.33
TRAV33-201ENST00000557514 SEMA3EO15041 775 aa12.99□□□□□ -0.33
TRAV33-201ENST00000557514 NPM3O75607 178 aaKnown RBP12.99□□□□□ -0.33
TRAV33-201ENST00000557514 ERVK-9P63128 1117 aa12.99□□□□□ -0.33
TRAV33-201ENST00000557514 ERVK-24P63145 666 aa12.99□□□□□ -0.33
TRAV33-201ENST00000557514 MTMR2Q13614 643 aa12.99□□□□□ -0.33
TRAV33-201ENST00000557514 RRP1BQ14684 758 aaKnown RBP12.99□□□□□ -0.33
TRAV33-201ENST00000557514 ADAMTS19Q8TE59 1207 aa12.99□□□□□ -0.33
TRAV33-201ENST00000557514 FAM163AQ96GL9 167 aaPredicted RBP12.99□□□□□ -0.33
TRAV33-201ENST00000557514 P2RX7Q99572 595 aaKnown RBP12.99□□□□□ -0.33
TRAV33-201ENST00000557514 RBPJLQ9UBG7 517 aa12.99□□□□□ -0.33
TRAV33-201ENST00000557514 ATP11BQ9Y2G3 1177 aa12.99□□□□□ -0.33
TRAV33-201ENST00000557514 CHD7Q9P2D1 2997 aa12.98□□□□□ -0.33
TRAV33-201ENST00000557514 CAP2P40123 477 aa12.98□□□□□ -0.33
TRAV33-201ENST00000557514 BTDP43251 543 aa12.98□□□□□ -0.33
TRAV33-201ENST00000557514 RHBDL3P58872 404 aa12.98□□□□□ -0.33
TRAV33-201ENST00000557514 MAP2K5Q13163 448 aa12.98□□□□□ -0.33
TRAV33-201ENST00000557514 MFSD14CQ5VZR4 134 aa12.98□□□□□ -0.33
TRAV33-201ENST00000557514 POTEEQ6S8J3 1075 aa12.98□□□□□ -0.33
TRAV33-201ENST00000557514 PLEKHH3Q7Z736 793 aa12.98□□□□□ -0.33
TRAV33-201ENST00000557514 RNPC3Q96LT9 517 aaKnown RBP12.98□□□□□ -0.33
TRAV33-201ENST00000557514 WDR18Q9BV38 432 aa12.98□□□□□ -0.33
TRAV33-201ENST00000557514 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.98□□□□□ -0.33
TRAV33-201ENST00000557514 PRDM5Q9NQX1 630 aaPredicted RBP12.98□□□□□ -0.33
TRAV33-201ENST00000557514 THEGQ9P2T0 379 aa12.98□□□□□ -0.33
TRAV33-201ENST00000557514 EYA2O00167 538 aa12.97□□□□□ -0.33
TRAV33-201ENST00000557514 DNAJB2P25686 324 aa12.97□□□□□ -0.33
TRAV33-201ENST00000557514 BACE1P56817 501 aa12.97□□□□□ -0.33
TRAV33-201ENST00000557514 TRIM60Q495X7 471 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms