RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 DOCK3Q8IZD9 2030 aa19.08■□□□□ 0.65
SUPT16H-205ENST00000556217 TFRCP02786 760 aaKnown RBP19.08■□□□□ 0.64
SUPT16H-205ENST00000556217 ELNP15502 786 aa19.08■□□□□ 0.64
SUPT16H-205ENST00000556217 TFCP2Q12800 502 aa19.08■□□□□ 0.64
SUPT16H-205ENST00000556217 GORABQ5T7V8 394 aa19.08■□□□□ 0.64
SUPT16H-205ENST00000556217 PROCA1Q8NCQ7 364 aaPredicted RBP19.08■□□□□ 0.64
SUPT16H-205ENST00000556217 TBC1D2Q9BYX2 928 aa19.08■□□□□ 0.64
SUPT16H-205ENST00000556217 OSBPL5Q9H0X9 879 aaPredicted RBP19.08■□□□□ 0.64
SUPT16H-205ENST00000556217 RHBDL3P58872 404 aa19.07■□□□□ 0.64
SUPT16H-205ENST00000556217 PABPC4Q13310 644 aaKnown RBP eCLIP19.07■□□□□ 0.64
SUPT16H-205ENST00000556217 FAM110CQ1W6H9 321 aa19.07■□□□□ 0.64
SUPT16H-205ENST00000556217 ANKRD13CQ8N6S4 541 aa19.07■□□□□ 0.64
SUPT16H-205ENST00000556217 NEUROD6Q96NK8 337 aa19.07■□□□□ 0.64
SUPT16H-205ENST00000556217 TAOK2Q9UL54 1235 aa19.07■□□□□ 0.64
SUPT16H-205ENST00000556217 COL2A1P02458 1487 aaPredicted RBP19.07■□□□□ 0.64
SUPT16H-205ENST00000556217 LOC285556D6RIA3 1793 aa19.06■□□□□ 0.64
SUPT16H-205ENST00000556217 GCLCP48506 637 aaPredicted RBP19.06■□□□□ 0.64
SUPT16H-205ENST00000556217 MTX1Q13505 466 aa19.06■□□□□ 0.64
SUPT16H-205ENST00000556217 SPATA5Q8NB90 893 aa19.06■□□□□ 0.64
SUPT16H-205ENST00000556217 ARHGAP45Q92619 1136 aa19.06■□□□□ 0.64
SUPT16H-205ENST00000556217 DEFB118Q96PH6 123 aa19.06■□□□□ 0.64
SUPT16H-205ENST00000556217 SLURP2P0DP57 97 aa19.05■□□□□ 0.64
SUPT16H-205ENST00000556217 TREML2Q5T2D2 321 aa19.05■□□□□ 0.64
SUPT16H-205ENST00000556217 CCDC84Q86UT8 332 aaPredicted RBP19.05■□□□□ 0.64
SUPT16H-205ENST00000556217 DEFB123Q8N688 67 aa19.05■□□□□ 0.64
SUPT16H-205ENST00000556217 ZNF280CQ8ND82 737 aa19.05■□□□□ 0.64
SUPT16H-205ENST00000556217 PAK6Q9NQU5 681 aaPredicted RBP19.05■□□□□ 0.64
SUPT16H-205ENST00000556217 RAI14Q9P0K7 980 aa19.05■□□□□ 0.64
SUPT16H-205ENST00000556217 HMG20BQ9P0W2 317 aa19.05■□□□□ 0.64
SUPT16H-205ENST00000556217 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.05■□□□□ 0.64
SUPT16H-205ENST00000556217 STXBP5LQ9Y2K9 1186 aa19.05■□□□□ 0.64
SUPT16H-205ENST00000556217 BMP8BP34820 402 aa19.04■□□□□ 0.64
SUPT16H-205ENST00000556217 SPP2Q13103 211 aa19.04■□□□□ 0.64
SUPT16H-205ENST00000556217 NSUN4Q96CB9 384 aaKnown RBP19.04■□□□□ 0.64
SUPT16H-205ENST00000556217 NOL10Q9BSC4 688 aaKnown RBP19.04■□□□□ 0.64
SUPT16H-205ENST00000556217 FAM196BA6NMK8 535 aa19.03■□□□□ 0.64
SUPT16H-205ENST00000556217 RARSP54136 660 aaKnown RBP19.03■□□□□ 0.64
SUPT16H-205ENST00000556217 ZNF384Q8TF68 577 aa19.03■□□□□ 0.64
SUPT16H-205ENST00000556217 AS3MTQ9HBK9 375 aa19.03■□□□□ 0.64
SUPT16H-205ENST00000556217 HERC5Q9UII4 1024 aaKnown RBP19.03■□□□□ 0.64
SUPT16H-205ENST00000556217 USP17L5A8MUK1 530 aa19.02■□□□□ 0.64
SUPT16H-205ENST00000556217 ARID4AP29374 1257 aaPredicted RBP19.02■□□□□ 0.64
SUPT16H-205ENST00000556217 CAP2P40123 477 aa19.02■□□□□ 0.64
SUPT16H-205ENST00000556217 HMGCS2P54868 508 aa19.02■□□□□ 0.64
SUPT16H-205ENST00000556217 TBC1D9Q6ZT07 1266 aa19.02■□□□□ 0.64
SUPT16H-205ENST00000556217 TEX11Q8IYF3 940 aa19.02■□□□□ 0.64
SUPT16H-205ENST00000556217 CRISPLD2Q9H0B8 497 aa19.02■□□□□ 0.64
SUPT16H-205ENST00000556217 LRP2BPQ9P2M1 347 aa19.02■□□□□ 0.64
SUPT16H-205ENST00000556217 IPO8O15397 1037 aaKnown RBP19.01■□□□□ 0.63
SUPT16H-205ENST00000556217 HMGCRP04035 888 aa19.01■□□□□ 0.63
SUPT16H-205ENST00000556217 UQCRFS1P1P0C7P4 283 aa19.01■□□□□ 0.63
SUPT16H-205ENST00000556217 G3BP1Q13283 466 aaKnown RBP eCLIP19.01■□□□□ 0.632e-7■□□□□ 8.7
SUPT16H-205ENST00000556217 PI16Q6UXB8 463 aa19.01■□□□□ 0.63
SUPT16H-205ENST00000556217 NECAB2Q7Z6G3 386 aa19.01■□□□□ 0.63
SUPT16H-205ENST00000556217 GDF15Q99988 308 aa19.01■□□□□ 0.63
SUPT16H-205ENST00000556217 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.01■□□□□ 0.63
SUPT16H-205ENST00000556217 GNAI2P04899 355 aa19■□□□□ 0.63
SUPT16H-205ENST00000556217 ANKLE1Q8NAG6 615 aa19■□□□□ 0.63
SUPT16H-205ENST00000556217 PAWRQ96IZ0 340 aaKnown RBP19■□□□□ 0.63
SUPT16H-205ENST00000556217 ASCC2Q9H1I8 757 aaPredicted RBP19■□□□□ 0.63
SUPT16H-205ENST00000556217 DHX36Q9H2U1 1008 aaKnown RBP19■□□□□ 0.63
SUPT16H-205ENST00000556217 PI4KBQ9UBF8 816 aa19■□□□□ 0.63
SUPT16H-205ENST00000556217 UNC80Q8N2C7 3258 aa19■□□□□ 0.63
SUPT16H-205ENST00000556217 MAST2Q6P0Q8 1798 aa18.99■□□□□ 0.63
SUPT16H-205ENST00000556217 BAG3O95817 575 aa18.99■□□□□ 0.63
SUPT16H-205ENST00000556217 PLCG2P16885 1265 aa18.99■□□□□ 0.63
SUPT16H-205ENST00000556217 SH3D19Q5HYK7 790 aa18.99■□□□□ 0.63
SUPT16H-205ENST00000556217 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.99■□□□□ 0.63
SUPT16H-205ENST00000556217 ALPK3Q96L96 1907 aa18.98■□□□□ 0.63
SUPT16H-205ENST00000556217 MCAMP43121 646 aa18.98■□□□□ 0.63
SUPT16H-205ENST00000556217 IRX3P78415 501 aaPredicted RBP18.98■□□□□ 0.63
SUPT16H-205ENST00000556217 LRIT3Q3SXY7 679 aa18.98■□□□□ 0.63
SUPT16H-205ENST00000556217 Q7L0L9 218 aa18.98■□□□□ 0.63
SUPT16H-205ENST00000556217 SH3RF3Q8TEJ3 882 aaPredicted RBP18.98■□□□□ 0.63
SUPT16H-205ENST00000556217 WDR18Q9BV38 432 aa18.98■□□□□ 0.63
SUPT16H-205ENST00000556217 COL25A1Q9BXS0 654 aaPredicted RBP18.98■□□□□ 0.63
SUPT16H-205ENST00000556217 TRIM34Q9BYJ4 488 aa18.98■□□□□ 0.63
SUPT16H-205ENST00000556217 HMX1Q9NP08 348 aaPredicted RBP18.98■□□□□ 0.63
SUPT16H-205ENST00000556217 MTMR10Q9NXD2 777 aa18.98■□□□□ 0.63
SUPT16H-205ENST00000556217 TMOD4Q9NZQ9 345 aa18.98■□□□□ 0.63
SUPT16H-205ENST00000556217 RPTORQ8N122 1335 aa18.98■□□□□ 0.63
SUPT16H-205ENST00000556217 ASNSP08243 561 aa18.97■□□□□ 0.63
SUPT16H-205ENST00000556217 NAA16Q6N069 864 aaPredicted RBP18.97■□□□□ 0.63
SUPT16H-205ENST00000556217 MORF4L1Q9UBU8 362 aa18.97■□□□□ 0.63
SUPT16H-205ENST00000556217 FOCADQ5VW36 1801 aa18.97■□□□□ 0.63
SUPT16H-205ENST00000556217 CDK5RAP2Q96SN8 1893 aa18.97■□□□□ 0.63
SUPT16H-205ENST00000556217 SIPA1L1O43166 1804 aa18.96■□□□□ 0.63
SUPT16H-205ENST00000556217 BACE1P56817 501 aa18.96■□□□□ 0.63
SUPT16H-205ENST00000556217 MTMR2Q13614 643 aa18.96■□□□□ 0.63
SUPT16H-205ENST00000556217 RRP1BQ14684 758 aaKnown RBP18.96■□□□□ 0.63
SUPT16H-205ENST00000556217 TTC39AQ5SRH9 613 aa18.96■□□□□ 0.63
SUPT16H-205ENST00000556217 CRACR2BQ8N4Y2 399 aaPredicted RBP18.96■□□□□ 0.63
SUPT16H-205ENST00000556217 NBPF3Q9H094 633 aa18.96■□□□□ 0.63
SUPT16H-205ENST00000556217 GINM1Q9NU53 330 aa18.96■□□□□ 0.63
SUPT16H-205ENST00000556217 AATFQ9NY61 560 aaKnown RBP eCLIP18.96■□□□□ 0.63
SUPT16H-205ENST00000556217 GJD2Q9UKL4 321 aa18.96■□□□□ 0.63
SUPT16H-205ENST00000556217 PLXNB2O15031 1838 aa18.95■□□□□ 0.62
SUPT16H-205ENST00000556217 C19orf81C9J6K1 198 aa18.95■□□□□ 0.62
SUPT16H-205ENST00000556217 TRIM27P14373 513 aa18.95■□□□□ 0.62
SUPT16H-205ENST00000556217 CCDC158Q5M9N0 1113 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms