RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 FAM217BQ9NTX9 383 aaPredicted RBP19.51■□□□□ 0.71
PPP4R3A-208ENST00000555462 SH2B2O14492 632 aaPredicted RBP19.5■□□□□ 0.71
PPP4R3A-208ENST00000555462 CBFA2T2O43439 604 aa19.5■□□□□ 0.71
PPP4R3A-208ENST00000555462 TMEM139Q8IV31 216 aa19.5■□□□□ 0.71
PPP4R3A-208ENST00000555462 JAG2Q9Y219 1238 aa19.5■□□□□ 0.71
PPP4R3A-208ENST00000555462 H3BQF6 201 aa19.5■□□□□ 0.71
PPP4R3A-208ENST00000555462 ZSCAN12O43309 604 aa19.5■□□□□ 0.71
PPP4R3A-208ENST00000555462 ZNF174Q15697 407 aa19.5■□□□□ 0.71
PPP4R3A-208ENST00000555462 EARS2Q5JPH6 523 aaKnown RBP19.5■□□□□ 0.71
PPP4R3A-208ENST00000555462 RAD9BQ6WBX8 426 aa19.5■□□□□ 0.71
PPP4R3A-208ENST00000555462 PDE11AQ9HCR9 933 aa19.5■□□□□ 0.71
PPP4R3A-208ENST00000555462 ARFGAP3Q9NP61 516 aa19.5■□□□□ 0.71
PPP4R3A-208ENST00000555462 TRIM10Q9UDY6 481 aa19.5■□□□□ 0.71
PPP4R3A-208ENST00000555462 ENC1O14682 589 aa19.49■□□□□ 0.71
PPP4R3A-208ENST00000555462 KCTD19Q17RG1 926 aaPredicted RBP19.49■□□□□ 0.71
PPP4R3A-208ENST00000555462 PRDM11Q9NQV5 511 aa19.49■□□□□ 0.71
PPP4R3A-208ENST00000555462 PDE6AP16499 860 aa19.49■□□□□ 0.71
PPP4R3A-208ENST00000555462 CYP2C19P33261 490 aa19.49■□□□□ 0.71
PPP4R3A-208ENST00000555462 EVX2Q03828 476 aa19.49■□□□□ 0.71
PPP4R3A-208ENST00000555462 RESP18Q5W5W9 173 aa19.49■□□□□ 0.71
PPP4R3A-208ENST00000555462 SPECC1LQ69YQ0 1117 aa19.49■□□□□ 0.71
PPP4R3A-208ENST00000555462 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.49■□□□□ 0.71
PPP4R3A-208ENST00000555462 TRMT112Q9UI30 125 aaKnown RBP19.49■□□□□ 0.71
PPP4R3A-208ENST00000555462 TUBE1Q9UJT0 475 aa19.49■□□□□ 0.71
PPP4R3A-208ENST00000555462 ZMYM6O95789 1325 aa19.49■□□□□ 0.71
PPP4R3A-208ENST00000555462 C19orf44Q9H6X5 657 aa19.49■□□□□ 0.71
PPP4R3A-208ENST00000555462 LAMA4Q16363 1823 aa19.48■□□□□ 0.71
PPP4R3A-208ENST00000555462 A0A087X0B3 334 aa19.48■□□□□ 0.71
PPP4R3A-208ENST00000555462 ARHGAP6O43182 974 aa19.48■□□□□ 0.71
PPP4R3A-208ENST00000555462 ZRANB2O95218 330 aaKnown RBP eCLIP19.48■□□□□ 0.717e-6■■■■■ 37.3
PPP4R3A-208ENST00000555462 CD44P16070 742 aaKnown RBP19.48■□□□□ 0.71
PPP4R3A-208ENST00000555462 FAM193AP78312 1265 aa19.48■□□□□ 0.71
PPP4R3A-208ENST00000555462 IGSF22Q8N9C0 903 aa19.48■□□□□ 0.71
PPP4R3A-208ENST00000555462 MED1Q15648 1581 aaPredicted RBP19.48■□□□□ 0.71
PPP4R3A-208ENST00000555462 CASP14P31944 242 aa19.48■□□□□ 0.71
PPP4R3A-208ENST00000555462 SAFBQ15424 915 aaKnown RBP eCLIP19.48■□□□□ 0.71
PPP4R3A-208ENST00000555462 NOSTRINQ8IVI9 506 aa19.48■□□□□ 0.71
PPP4R3A-208ENST00000555462 CCDC191Q8NCU4 936 aa19.48■□□□□ 0.71
PPP4R3A-208ENST00000555462 RGS22Q8NE09 1264 aa19.48■□□□□ 0.71
PPP4R3A-208ENST00000555462 CCDC102AQ96A19 550 aa19.48■□□□□ 0.71
PPP4R3A-208ENST00000555462 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.48■□□□□ 0.714e-6■■■■□ 23.9
PPP4R3A-208ENST00000555462 LY9Q9HBG7 655 aa19.48■□□□□ 0.71
PPP4R3A-208ENST00000555462 MARF1Q9Y4F3 1742 aaKnown RBP19.48■□□□□ 0.71
PPP4R3A-208ENST00000555462 IKBKBO14920 756 aa19.47■□□□□ 0.71
PPP4R3A-208ENST00000555462 FOXR1Q6PIV2 292 aa19.47■□□□□ 0.71
PPP4R3A-208ENST00000555462 EPB41L4AQ9HCS5 686 aaPredicted RBP19.47■□□□□ 0.71
PPP4R3A-208ENST00000555462 HPSEQ9Y251 543 aa19.47■□□□□ 0.71
PPP4R3A-208ENST00000555462 ATF3P18847 181 aa19.47■□□□□ 0.71
PPP4R3A-208ENST00000555462 ADD2P35612 726 aa19.47■□□□□ 0.71
PPP4R3A-208ENST00000555462 LONRF2Q1L5Z9 754 aa19.47■□□□□ 0.71
PPP4R3A-208ENST00000555462 PPFIBP1Q86W92 1011 aa19.47■□□□□ 0.71
PPP4R3A-208ENST00000555462 ZCRB1Q8TBF4 217 aaKnown RBP19.47■□□□□ 0.71
PPP4R3A-208ENST00000555462 IGDCC4Q8TDY8 1250 aa19.47■□□□□ 0.71
PPP4R3A-208ENST00000555462 CAPZA3Q96KX2 299 aa19.47■□□□□ 0.71
PPP4R3A-208ENST00000555462 AKAP2Q9Y2D5 859 aa19.47■□□□□ 0.71
PPP4R3A-208ENST00000555462 RNF225M0QZC1 329 aaPredicted RBP19.46■□□□□ 0.71
PPP4R3A-208ENST00000555462 RAD51AP2Q09MP3 1159 aa19.46■□□□□ 0.71
PPP4R3A-208ENST00000555462 NCAPH2Q6IBW4 605 aa19.46■□□□□ 0.71
PPP4R3A-208ENST00000555462 PNKPQ96T60 521 aa19.46■□□□□ 0.71
PPP4R3A-208ENST00000555462 RAI14Q9P0K7 980 aa19.46■□□□□ 0.71
PPP4R3A-208ENST00000555462 EFCAB8A8MWE9 144 aa19.46■□□□□ 0.71
PPP4R3A-208ENST00000555462 NTRK3Q16288 839 aa19.46■□□□□ 0.71
PPP4R3A-208ENST00000555462 SLF1Q9BQI6 1058 aa19.46■□□□□ 0.71
PPP4R3A-208ENST00000555462 BPIFA3Q9BQP9 254 aa19.46■□□□□ 0.7
PPP4R3A-208ENST00000555462 SLIT1O75093 1534 aa19.45■□□□□ 0.7
PPP4R3A-208ENST00000555462 PHLPP2Q6ZVD8 1323 aa19.45■□□□□ 0.7
PPP4R3A-208ENST00000555462 BCAMP50895 628 aa19.45■□□□□ 0.7
PPP4R3A-208ENST00000555462 CALCOCO1Q9P1Z2 691 aa19.45■□□□□ 0.7
PPP4R3A-208ENST00000555462 CHMP4BP1P59074 171 aa19.45■□□□□ 0.7
PPP4R3A-208ENST00000555462 AKAP17AQ02040 695 aaKnown RBP19.45■□□□□ 0.7
PPP4R3A-208ENST00000555462 RTN1Q16799 776 aa19.45■□□□□ 0.7
PPP4R3A-208ENST00000555462 IFNL3Q8IZI9 196 aa19.45■□□□□ 0.7
PPP4R3A-208ENST00000555462 SLC35F6Q8N357 371 aa19.45■□□□□ 0.7
PPP4R3A-208ENST00000555462 FAM53CQ9NYF3 392 aa19.45■□□□□ 0.7
PPP4R3A-208ENST00000555462 TAB2Q9NYJ8 693 aa19.45■□□□□ 0.7
PPP4R3A-208ENST00000555462 HDAC6Q9UBN7 1215 aa19.45■□□□□ 0.7
PPP4R3A-208ENST00000555462 SLC4A4Q9Y6R1 1079 aa19.45■□□□□ 0.7
PPP4R3A-208ENST00000555462 SRGAP2O75044 1071 aa19.44■□□□□ 0.7
PPP4R3A-208ENST00000555462 FXR1P51114 621 aaKnown RBP eCLIP19.44■□□□□ 0.7
PPP4R3A-208ENST00000555462 TCIRG1Q13488 830 aa19.44■□□□□ 0.7
PPP4R3A-208ENST00000555462 LCORLQ8N3X6 602 aa19.44■□□□□ 0.7
PPP4R3A-208ENST00000555462 TTLL11Q8NHH1 800 aa19.44■□□□□ 0.7
PPP4R3A-208ENST00000555462 CTNND2Q9UQB3 1225 aa19.44■□□□□ 0.7
PPP4R3A-208ENST00000555462 CUTAO60888 179 aa19.44■□□□□ 0.7
PPP4R3A-208ENST00000555462 MFSD6Q6ZSS7 791 aa19.44■□□□□ 0.7
PPP4R3A-208ENST00000555462 GSPT2Q8IYD1 628 aaKnown RBP19.44■□□□□ 0.7
PPP4R3A-208ENST00000555462 POLD4Q9HCU8 107 aa19.44■□□□□ 0.7
PPP4R3A-208ENST00000555462 GUCA1BQ9UMX6 200 aa19.44■□□□□ 0.7
PPP4R3A-208ENST00000555462 MRFAP1Q9Y605 127 aa19.44■□□□□ 0.7
PPP4R3A-208ENST00000555462 RGPD5Q99666 1765 aa19.44■□□□□ 0.7
PPP4R3A-208ENST00000555462 CDKL5O76039 1030 aa19.44■□□□□ 0.7
PPP4R3A-208ENST00000555462 VEGFAP15692 232 aaPredicted RBP19.44■□□□□ 0.7
PPP4R3A-208ENST00000555462 MAP3K9P80192 1104 aa19.44■□□□□ 0.7
PPP4R3A-208ENST00000555462 ADAM21Q9UKJ8 722 aa19.44■□□□□ 0.7
PPP4R3A-208ENST00000555462 V9GY48 417 aaPredicted RBP19.44■□□□□ 0.7
PPP4R3A-208ENST00000555462 C5P01031 1676 aa19.43■□□□□ 0.7
PPP4R3A-208ENST00000555462 IRS4O14654 1257 aaPredicted RBP19.43■□□□□ 0.7
PPP4R3A-208ENST00000555462 ZSCAN26Q16670 478 aa19.43■□□□□ 0.7
PPP4R3A-208ENST00000555462 CHD2O14647 1828 aaKnown RBP19.43■□□□□ 0.7
PPP4R3A-208ENST00000555462 AKR1B15C9JRZ8 316 aaPredicted RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms