RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 FCHSD1Q86WN1 690 aa9.45□□□□□ -0.9
LINC00641-201ENST00000555379 DNAJC10Q8IXB1 793 aa9.45□□□□□ -0.9
LINC00641-201ENST00000555379 XAGE2Q96GT9 111 aa9.45□□□□□ -0.9
LINC00641-201ENST00000555379 SOS2Q07890 1332 aaPredicted RBP9.45□□□□□ -0.9
LINC00641-201ENST00000555379 KDM4AO75164 1064 aa9.45□□□□□ -0.9
LINC00641-201ENST00000555379 EPB41P11171 864 aaKnown RBP9.45□□□□□ -0.9
LINC00641-201ENST00000555379 TTLL7Q6ZT98 887 aa9.45□□□□□ -0.9
LINC00641-201ENST00000555379 RSPH3Q86UC2 560 aa9.45□□□□□ -0.9
LINC00641-201ENST00000555379 MAP2K2P36507 400 aa9.45□□□□□ -0.9
LINC00641-201ENST00000555379 ASIC1P78348 528 aa9.45□□□□□ -0.9
LINC00641-201ENST00000555379 NONOQ15233 471 aaKnown RBP eCLIP9.45□□□□□ -0.9
LINC00641-201ENST00000555379 FAM177A1Q8N128 213 aaPredicted RBP9.45□□□□□ -0.9
LINC00641-201ENST00000555379 UBXN4Q92575 508 aa9.45□□□□□ -0.9
LINC00641-201ENST00000555379 EFCC1Q9HA90 598 aa9.45□□□□□ -0.9
LINC00641-201ENST00000555379 ELP1O95163 1332 aa9.45□□□□□ -0.9
LINC00641-201ENST00000555379 FSD2A1L4K1 749 aa9.45□□□□□ -0.9
LINC00641-201ENST00000555379 N4BP1O75113 896 aaKnown RBP9.45□□□□□ -0.9
LINC00641-201ENST00000555379 FERP16591 822 aa9.45□□□□□ -0.9
LINC00641-201ENST00000555379 CASQ1P31415 396 aa9.45□□□□□ -0.9
LINC00641-201ENST00000555379 GPATCH4Q5T3I0 446 aaKnown RBP9.45□□□□□ -0.9
LINC00641-201ENST00000555379 SLFN12Q8IYM2 578 aa9.45□□□□□ -0.9
LINC00641-201ENST00000555379 SPTLC2O15270 562 aa9.45□□□□□ -0.9
LINC00641-201ENST00000555379 CNGA1P29973 690 aa9.45□□□□□ -0.9
LINC00641-201ENST00000555379 CREB3L3Q68CJ9 461 aa9.45□□□□□ -0.9
LINC00641-201ENST00000555379 Q6ZUG5 572 aa9.45□□□□□ -0.9
LINC00641-201ENST00000555379 ADD3Q9UEY8 706 aaKnown RBP9.45□□□□□ -0.9
LINC00641-201ENST00000555379 USP31Q70CQ4 1352 aa9.45□□□□□ -0.9
LINC00641-201ENST00000555379 PER1O15534 1290 aaPredicted RBP9.44□□□□□ -0.9
LINC00641-201ENST00000555379 ATP2A2P16615 1042 aaKnown RBP9.44□□□□□ -0.9
LINC00641-201ENST00000555379 ATF7P17544 494 aaPredicted RBP9.44□□□□□ -0.9
LINC00641-201ENST00000555379 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.44□□□□□ -0.9
LINC00641-201ENST00000555379 NUP58Q9BVL2 599 aa9.44□□□□□ -0.9
LINC00641-201ENST00000555379 CARD14Q9BXL6 1004 aa9.44□□□□□ -0.9
LINC00641-201ENST00000555379 TSPOAP1O95153 1857 aa9.44□□□□□ -0.9
LINC00641-201ENST00000555379 GIGYF1O75420 1035 aaPredicted RBP9.44□□□□□ -0.9
LINC00641-201ENST00000555379 SLC1A4P43007 532 aa9.44□□□□□ -0.9
LINC00641-201ENST00000555379 UBE3CQ15386 1083 aa9.44□□□□□ -0.9
LINC00641-201ENST00000555379 PTPN14Q15678 1187 aa9.44□□□□□ -0.9
LINC00641-201ENST00000555379 KLHL40Q2TBA0 621 aa9.44□□□□□ -0.9
LINC00641-201ENST00000555379 FAM160B1Q5W0V3 765 aa9.44□□□□□ -0.9
LINC00641-201ENST00000555379 RNF214Q8ND24 703 aa9.44□□□□□ -0.9
LINC00641-201ENST00000555379 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.44□□□□□ -0.9
LINC00641-201ENST00000555379 ABCC12Q96J65 1359 aa9.44□□□□□ -0.9
LINC00641-201ENST00000555379 RGS12O14924 1447 aa9.44□□□□□ -0.9
LINC00641-201ENST00000555379 DCCP43146 1447 aa9.44□□□□□ -0.9
LINC00641-201ENST00000555379 GSTTP1A0A1W2PQM5 241 aa9.44□□□□□ -0.9
LINC00641-201ENST00000555379 KIF3CO14782 793 aa9.44□□□□□ -0.9
LINC00641-201ENST00000555379 TRIM37O94972 964 aa9.44□□□□□ -0.9
LINC00641-201ENST00000555379 SH3BGRP55822 239 aaPredicted RBP9.44□□□□□ -0.9
LINC00641-201ENST00000555379 GTF3C2Q8WUA4 911 aaPredicted RBP9.44□□□□□ -0.9
LINC00641-201ENST00000555379 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.44□□□□□ -0.9
LINC00641-201ENST00000555379 ARHGEF40Q8TER5 1519 aa9.44□□□□□ -0.9
LINC00641-201ENST00000555379 LAD1O00515 517 aa9.44□□□□□ -0.9
LINC00641-201ENST00000555379 PPEF1O14829 653 aaPredicted RBP9.44□□□□□ -0.9
LINC00641-201ENST00000555379 RIMBP2O15034 1052 aa9.44□□□□□ -0.9
LINC00641-201ENST00000555379 CCT2P78371 535 aaKnown RBP9.44□□□□□ -0.9
LINC00641-201ENST00000555379 DBN1Q16643 649 aa9.44□□□□□ -0.9
LINC00641-201ENST00000555379 CCDC102AQ96A19 550 aa9.44□□□□□ -0.9
LINC00641-201ENST00000555379 CPSF1Q10570 1443 aaKnown RBP9.44□□□□□ -0.9
LINC00641-201ENST00000555379 NEURL1BA8MQ27 555 aa9.43□□□□□ -0.9
LINC00641-201ENST00000555379 F8W031 263 aaPredicted RBP9.43□□□□□ -0.9
LINC00641-201ENST00000555379 N4BP3O15049 544 aa9.43□□□□□ -0.9
LINC00641-201ENST00000555379 MAIP1Q8WWC4 291 aa9.43□□□□□ -0.9
LINC00641-201ENST00000555379 IKBKGQ9Y6K9 419 aa9.43□□□□□ -0.9
LINC00641-201ENST00000555379 CCDC125Q86Z20 511 aa9.43□□□□□ -0.9
LINC00641-201ENST00000555379 PPM1EQ8WY54 764 aa9.43□□□□□ -0.9
LINC00641-201ENST00000555379 CCDC97Q96F63 343 aaPredicted RBP9.43□□□□□ -0.9
LINC00641-201ENST00000555379 TACC1O75410 805 aa9.43□□□□□ -0.9
LINC00641-201ENST00000555379 IREB2P48200 963 aaKnown RBP9.43□□□□□ -0.9
LINC00641-201ENST00000555379 RBBP5Q15291 538 aaKnown RBP9.43□□□□□ -0.9
LINC00641-201ENST00000555379 FNBP1Q96RU3 617 aa9.43□□□□□ -0.9
LINC00641-201ENST00000555379 SUGT1Q9Y2Z0 365 aa9.43□□□□□ -0.9
LINC00641-201ENST00000555379 ERBB3P21860 1342 aa9.43□□□□□ -0.9
LINC00641-201ENST00000555379 CUTAO60888 179 aa9.43□□□□□ -0.9
LINC00641-201ENST00000555379 FAM160B2Q86V87 743 aa9.43□□□□□ -0.9
LINC00641-201ENST00000555379 SMCR8Q8TEV9 937 aaPredicted RBP9.43□□□□□ -0.9
LINC00641-201ENST00000555379 MTA3Q9BTC8 594 aa9.43□□□□□ -0.9
LINC00641-201ENST00000555379 ARHGEF35A5YM69 484 aa9.42□□□□□ -0.9
LINC00641-201ENST00000555379 AKR1B10O60218 316 aa9.42□□□□□ -0.9
LINC00641-201ENST00000555379 ZNF853P0CG23 659 aa9.42□□□□□ -0.9
LINC00641-201ENST00000555379 HAND2P61296 217 aa9.42□□□□□ -0.9
LINC00641-201ENST00000555379 KIAA0753Q2KHM9 967 aa9.42□□□□□ -0.9
LINC00641-201ENST00000555379 ASPRV1Q53RT3 343 aa9.42□□□□□ -0.9
LINC00641-201ENST00000555379 LIN9Q5TKA1 542 aa9.42□□□□□ -0.9
LINC00641-201ENST00000555379 COPRSQ9NQ92 184 aa9.42□□□□□ -0.9
LINC00641-201ENST00000555379 PPP2R3AQ06190 1150 aa9.42□□□□□ -0.9
LINC00641-201ENST00000555379 PPP2R5AQ15172 486 aa9.42□□□□□ -0.9
LINC00641-201ENST00000555379 ZBTB8OSQ8IWT0 167 aa9.42□□□□□ -0.9
LINC00641-201ENST00000555379 NEK11Q8NG66 645 aa9.42□□□□□ -0.9
LINC00641-201ENST00000555379 COA1Q9GZY4 146 aa9.42□□□□□ -0.9
LINC00641-201ENST00000555379 SPHKAPQ2M3C7 1700 aa9.42□□□□□ -0.9
LINC00641-201ENST00000555379 RPS6KA4O75676 772 aa9.42□□□□□ -0.9
LINC00641-201ENST00000555379 DALRD3Q5D0E6 543 aaKnown RBP9.42□□□□□ -0.9
LINC00641-201ENST00000555379 CCDC155Q8N6L0 562 aa9.42□□□□□ -0.9
LINC00641-201ENST00000555379 CD2APQ9Y5K6 639 aa9.42□□□□□ -0.9
LINC00641-201ENST00000555379 HEG1Q9ULI3 1381 aa9.42□□□□□ -0.9
LINC00641-201ENST00000555379 STK10O94804 968 aaKnown RBP9.42□□□□□ -0.9
LINC00641-201ENST00000555379 F13A1P00488 732 aa9.42□□□□□ -0.9
LINC00641-201ENST00000555379 CHMLP26374 656 aa9.42□□□□□ -0.9
LINC00641-201ENST00000555379 TMOD1P28289 359 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms