RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 CDC42BPGQ6DT37 1551 aa6.1□□□□□ -1.43
VTI1B-203ENST00000554636 SOWAHDA6NJG2 315 aa6.09□□□□□ -1.43
VTI1B-203ENST00000554636 GPR182O15218 404 aa6.09□□□□□ -1.43
VTI1B-203ENST00000554636 H2AFB1P0C5Y9 115 aa6.09□□□□□ -1.43
VTI1B-203ENST00000554636 H2AFB2P0C5Z0 115 aa6.09□□□□□ -1.43
VTI1B-203ENST00000554636 ATF3P18847 181 aa6.09□□□□□ -1.43
VTI1B-203ENST00000554636 RGL3Q3MIN7 710 aa6.09□□□□□ -1.43
VTI1B-203ENST00000554636 ZMYM1Q5SVZ6 1142 aa6.09□□□□□ -1.43
VTI1B-203ENST00000554636 BRINP3Q76B58 766 aa6.09□□□□□ -1.43
VTI1B-203ENST00000554636 USP26Q9BXU7 913 aa6.09□□□□□ -1.43
VTI1B-203ENST00000554636 NIF3L1Q9GZT8 377 aa6.09□□□□□ -1.43
VTI1B-203ENST00000554636 SHPRHQ149N8 1683 aa6.09□□□□□ -1.43
VTI1B-203ENST00000554636 JCADQ9P266 1359 aa6.08□□□□□ -1.44
VTI1B-203ENST00000554636 LRP6O75581 1613 aa6.08□□□□□ -1.44
VTI1B-203ENST00000554636 A0A1W2PP55 124 aa6.08□□□□□ -1.44
VTI1B-203ENST00000554636 SCO2A0A1W2PP80 73 aa6.08□□□□□ -1.44
VTI1B-203ENST00000554636 TM4SF5O14894 197 aa6.08□□□□□ -1.44
VTI1B-203ENST00000554636 ARL4DP49703 201 aa6.08□□□□□ -1.44
VTI1B-203ENST00000554636 PDE3BQ13370 1112 aa6.08□□□□□ -1.44
VTI1B-203ENST00000554636 IKBKEQ14164 716 aa6.08□□□□□ -1.44
VTI1B-203ENST00000554636 KIAA1211Q6ZU35 1233 aa6.08□□□□□ -1.44
VTI1B-203ENST00000554636 VN1R5Q7Z5H4 357 aa6.08□□□□□ -1.44
VTI1B-203ENST00000554636 TMEM130Q8N3G9 435 aa6.08□□□□□ -1.44
VTI1B-203ENST00000554636 FAM129BQ96TA1 746 aa6.08□□□□□ -1.44
VTI1B-203ENST00000554636 LIN7BQ9HAP6 207 aa6.08□□□□□ -1.44
VTI1B-203ENST00000554636 NPHS2Q9NP85 383 aa6.08□□□□□ -1.44
VTI1B-203ENST00000554636 ADGRB1O14514 1584 aa6.08□□□□□ -1.44
VTI1B-203ENST00000554636 C1orf167Q5SNV9 1468 aa6.08□□□□□ -1.44
VTI1B-203ENST00000554636 YTHDC2Q9H6S0 1430 aaKnown RBP6.08□□□□□ -1.44
VTI1B-203ENST00000554636 DHX57Q6P158 1386 aaKnown RBP6.07□□□□□ -1.44
VTI1B-203ENST00000554636 ABCC11Q96J66 1382 aa6.07□□□□□ -1.44
VTI1B-203ENST00000554636 PLEKHH1Q9ULM0 1364 aa6.07□□□□□ -1.44
VTI1B-203ENST00000554636 SOX1O00570 391 aaPredicted RBP6.07□□□□□ -1.44
VTI1B-203ENST00000554636 CPNE3O75131 537 aaKnown RBP6.07□□□□□ -1.44
VTI1B-203ENST00000554636 BRD1O95696 1058 aa6.07□□□□□ -1.44
VTI1B-203ENST00000554636 C19orf57Q0VDD7 668 aa6.07□□□□□ -1.44
VTI1B-203ENST00000554636 PRR23CQ6ZRP0 262 aa6.07□□□□□ -1.44
VTI1B-203ENST00000554636 GALNT12Q8IXK2 581 aa6.07□□□□□ -1.44
VTI1B-203ENST00000554636 DZIP1LQ8IYY4 767 aaKnown RBP6.07□□□□□ -1.44
VTI1B-203ENST00000554636 UBL7Q96S82 380 aaPredicted RBP6.07□□□□□ -1.44
VTI1B-203ENST00000554636 BHLHE41Q9C0J9 482 aaPredicted RBP6.07□□□□□ -1.44
VTI1B-203ENST00000554636 C14orf93Q9H972 538 aaKnown RBP6.07□□□□□ -1.44
VTI1B-203ENST00000554636 DLC1Q96QB1 1528 aa6.07□□□□□ -1.44
VTI1B-203ENST00000554636 FMN2Q9NZ56 1722 aa6.06□□□□□ -1.44
VTI1B-203ENST00000554636 EIF1AYO14602 144 aaKnown RBP6.06□□□□□ -1.44
VTI1B-203ENST00000554636 NEFLP07196 543 aa6.06□□□□□ -1.44
VTI1B-203ENST00000554636 GRIA4P48058 902 aa6.06□□□□□ -1.44
VTI1B-203ENST00000554636 GSTM4Q03013 218 aa6.06□□□□□ -1.44
VTI1B-203ENST00000554636 SPRED3Q2MJR0 410 aa6.06□□□□□ -1.44
VTI1B-203ENST00000554636 TMEM132EQ6IEE7 984 aa6.06□□□□□ -1.44
VTI1B-203ENST00000554636 Q6ZS46 218 aa6.06□□□□□ -1.44
VTI1B-203ENST00000554636 Q8N3U1 123 aa6.06□□□□□ -1.44
VTI1B-203ENST00000554636 RUSC1Q9BVN2 902 aa6.06□□□□□ -1.44
VTI1B-203ENST00000554636 EHD4Q9H223 541 aa6.06□□□□□ -1.44
VTI1B-203ENST00000554636 OSGEPQ9NPF4 335 aa6.06□□□□□ -1.44
VTI1B-203ENST00000554636 RGS17Q9UGC6 210 aaPredicted RBP6.06□□□□□ -1.44
VTI1B-203ENST00000554636 IVNS1ABPQ9Y6Y0 642 aa6.06□□□□□ -1.44
VTI1B-203ENST00000554636 ADGRB2O60241 1585 aa6.06□□□□□ -1.44
VTI1B-203ENST00000554636 A0A096LPE4 126 aa6.05□□□□□ -1.44
VTI1B-203ENST00000554636 A0A1W2PPZ6 126 aa6.05□□□□□ -1.44
VTI1B-203ENST00000554636 SART1O43290 800 aaKnown RBP6.05□□□□□ -1.44
VTI1B-203ENST00000554636 GADD45BO75293 160 aaPredicted RBP6.05□□□□□ -1.44
VTI1B-203ENST00000554636 ESRRAP11474 423 aaPredicted RBP6.05□□□□□ -1.44
VTI1B-203ENST00000554636 MAPK1P28482 360 aa6.05□□□□□ -1.44
VTI1B-203ENST00000554636 WAPLQ7Z5K2 1190 aa6.05□□□□□ -1.44
VTI1B-203ENST00000554636 DDX17Q92841 729 aaKnown RBP6.05□□□□□ -1.44
VTI1B-203ENST00000554636 WNT8BQ93098 351 aa6.05□□□□□ -1.44
VTI1B-203ENST00000554636 UTP4Q969X6 686 aaKnown RBP6.05□□□□□ -1.44
VTI1B-203ENST00000554636 CEP41Q9BYV8 373 aa6.05□□□□□ -1.44
VTI1B-203ENST00000554636 STK26Q9P289 416 aa6.05□□□□□ -1.44
VTI1B-203ENST00000554636 PNPLA6Q8IY17 1366 aa6.05□□□□□ -1.44
VTI1B-203ENST00000554636 SPATA31A6Q5VVP1 1343 aa6.04□□□□□ -1.44
VTI1B-203ENST00000554636 PCDH1Q08174 1060 aa6.04□□□□□ -1.44
VTI1B-203ENST00000554636 FDX2Q6P4F2 183 aa6.04□□□□□ -1.44
VTI1B-203ENST00000554636 TMC7Q7Z402 723 aa6.04□□□□□ -1.44
VTI1B-203ENST00000554636 CCNJLQ8IV13 435 aa6.04□□□□□ -1.44
VTI1B-203ENST00000554636 CCDC74AQ96AQ1 378 aa6.04□□□□□ -1.44
VTI1B-203ENST00000554636 CITED4Q96RK1 184 aa6.04□□□□□ -1.44
VTI1B-203ENST00000554636 TCF12Q99081 682 aa6.04□□□□□ -1.44
VTI1B-203ENST00000554636 GNEQ9Y223 722 aaKnown RBP6.04□□□□□ -1.44
VTI1B-203ENST00000554636 COL22A1Q8NFW1 1626 aaPredicted RBP6.03□□□□□ -1.44
VTI1B-203ENST00000554636 PXDNQ92626 1479 aa6.03□□□□□ -1.44
VTI1B-203ENST00000554636 ARHGEF28Q8N1W1 1705 aaKnown RBP6.03□□□□□ -1.44
VTI1B-203ENST00000554636 KIAA1210Q9ULL0 1709 aa6.03□□□□□ -1.44
VTI1B-203ENST00000554636 IGHA2P01877 340 aa6.03□□□□□ -1.44
VTI1B-203ENST00000554636 FSTP19883 344 aa6.03□□□□□ -1.44
VTI1B-203ENST00000554636 PREPP48147 710 aa6.03□□□□□ -1.44
VTI1B-203ENST00000554636 PI16Q6UXB8 463 aa6.03□□□□□ -1.44
VTI1B-203ENST00000554636 ARMC10Q8N2F6 343 aa6.03□□□□□ -1.44
VTI1B-203ENST00000554636 EPS8L3Q8TE67 593 aaKnown RBP6.03□□□□□ -1.44
VTI1B-203ENST00000554636 DMRTB1Q96MA1 342 aa6.03□□□□□ -1.44
VTI1B-203ENST00000554636 CSRNP1Q96S65 589 aa6.03□□□□□ -1.44
VTI1B-203ENST00000554636 ORAI2Q96SN7 254 aa6.03□□□□□ -1.44
VTI1B-203ENST00000554636 RBCK1Q9BYM8 510 aa6.03□□□□□ -1.44
VTI1B-203ENST00000554636 RNF208Q9H0X6 261 aa6.03□□□□□ -1.44
VTI1B-203ENST00000554636 KCNF1Q9H3M0 494 aa6.03□□□□□ -1.44
VTI1B-203ENST00000554636 DCTN4Q9UJW0 460 aa6.03□□□□□ -1.44
VTI1B-203ENST00000554636 KIF1AQ12756 1690 aa6.03□□□□□ -1.44
VTI1B-203ENST00000554636 USP32Q8NFA0 1604 aa6.03□□□□□ -1.44
VTI1B-203ENST00000554636 LOC100289279A0A1B0GTE1 492 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms