RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 CYP11A1P05108 521 aa7.84□□□□□ -1.15
SCFD1-208ENST00000553278 ACRP10323 421 aa7.84□□□□□ -1.15
SCFD1-208ENST00000553278 PLCG1P19174 1290 aa7.84□□□□□ -1.15
SCFD1-208ENST00000553278 ARL4DP49703 201 aa7.84□□□□□ -1.15
SCFD1-208ENST00000553278 CDKN1CP49918 316 aaPredicted RBP7.84□□□□□ -1.15
SCFD1-208ENST00000553278 SLC7A5Q01650 507 aa7.84□□□□□ -1.15
SCFD1-208ENST00000553278 PABPC4Q13310 644 aaKnown RBP eCLIP7.84□□□□□ -1.15
SCFD1-208ENST00000553278 ZYXQ15942 572 aaKnown RBP7.84□□□□□ -1.15
SCFD1-208ENST00000553278 KIAA1211LQ6NV74 962 aa7.84□□□□□ -1.15
SCFD1-208ENST00000553278 JAMLQ86YT9 394 aa7.84□□□□□ -1.15
SCFD1-208ENST00000553278 CCAR1Q8IX12 1150 aaKnown RBP7.84□□□□□ -1.15
SCFD1-208ENST00000553278 ELMO3Q96BJ8 720 aa7.84□□□□□ -1.15
SCFD1-208ENST00000553278 SGSM3Q96HU1 749 aa7.84□□□□□ -1.15
SCFD1-208ENST00000553278 CORO1BQ9BR76 489 aa7.84□□□□□ -1.15
SCFD1-208ENST00000553278 ZC3H12CQ9C0D7 883 aaKnown RBP7.84□□□□□ -1.15
SCFD1-208ENST00000553278 CNNM2Q9H8M5 875 aa7.84□□□□□ -1.15
SCFD1-208ENST00000553278 KRT82Q9NSB4 513 aa7.84□□□□□ -1.15
SCFD1-208ENST00000553278 FRRS1LQ9P0K9 344 aa7.84□□□□□ -1.15
SCFD1-208ENST00000553278 CORINQ9Y5Q5 1042 aa7.84□□□□□ -1.15
SCFD1-208ENST00000553278 ALG1L2C9J202 215 aa7.83□□□□□ -1.16
SCFD1-208ENST00000553278 IRS4O14654 1257 aaPredicted RBP7.83□□□□□ -1.16
SCFD1-208ENST00000553278 TNFRSF10CO14798 259 aa7.83□□□□□ -1.16
SCFD1-208ENST00000553278 TPD52L2O43399 206 aaKnown RBP7.83□□□□□ -1.16
SCFD1-208ENST00000553278 KCNQ2O43526 872 aa7.83□□□□□ -1.16
SCFD1-208ENST00000553278 MAP4K4O95819 1239 aaPredicted RBP7.83□□□□□ -1.16
SCFD1-208ENST00000553278 PMLP29590 882 aa7.83□□□□□ -1.16
SCFD1-208ENST00000553278 CDCP2Q5VXM1 449 aa7.83□□□□□ -1.16
SCFD1-208ENST00000553278 GDF6Q6KF10 455 aaPredicted RBP7.83□□□□□ -1.16
SCFD1-208ENST00000553278 LRFN4Q6PJG9 635 aa7.83□□□□□ -1.16
SCFD1-208ENST00000553278 TNFRSF25Q93038 417 aa7.83□□□□□ -1.16
SCFD1-208ENST00000553278 IPO9Q96P70 1041 aaKnown RBP7.83□□□□□ -1.16
SCFD1-208ENST00000553278 PCGF6Q9BYE7 350 aa7.83□□□□□ -1.16
SCFD1-208ENST00000553278 MYH16Q9H6N6 1097 aa7.83□□□□□ -1.16
SCFD1-208ENST00000553278 GEMIN8Q9NWZ8 242 aaKnown RBP7.83□□□□□ -1.16
SCFD1-208ENST00000553278 PCDHB10Q9UN67 800 aa7.83□□□□□ -1.16
SCFD1-208ENST00000553278 RIPOR2Q9Y4F9 1068 aa7.83□□□□□ -1.16
SCFD1-208ENST00000553278 SOBPA7XYQ1 873 aa7.82□□□□□ -1.16
SCFD1-208ENST00000553278 NAT2P11245 290 aa7.82□□□□□ -1.16
SCFD1-208ENST00000553278 BMP4P12644 408 aa7.82□□□□□ -1.16
SCFD1-208ENST00000553278 SELPP16109 830 aa7.82□□□□□ -1.16
SCFD1-208ENST00000553278 EPHA1P21709 976 aa7.82□□□□□ -1.16
SCFD1-208ENST00000553278 ITGA6P23229 1130 aa7.82□□□□□ -1.16
SCFD1-208ENST00000553278 EVA1CP58658 441 aa7.82□□□□□ -1.16
SCFD1-208ENST00000553278 NFKB2Q00653 900 aa7.82□□□□□ -1.16
SCFD1-208ENST00000553278 INPP5AQ14642 412 aa7.82□□□□□ -1.16
SCFD1-208ENST00000553278 GNPTABQ3T906 1256 aa7.82□□□□□ -1.16
SCFD1-208ENST00000553278 BRDTQ58F21 947 aaPredicted RBP7.82□□□□□ -1.16
SCFD1-208ENST00000553278 DDX42Q86XP3 938 aaKnown RBP eCLIP7.82□□□□□ -1.16
SCFD1-208ENST00000553278 TTC9Q92623 222 aa7.82□□□□□ -1.16
SCFD1-208ENST00000553278 SLC9A7Q96T83 725 aa7.82□□□□□ -1.16
SCFD1-208ENST00000553278 KIF2CQ99661 725 aa7.82□□□□□ -1.16
SCFD1-208ENST00000553278 CDC6Q99741 560 aa7.82□□□□□ -1.16
SCFD1-208ENST00000553278 AVENQ9NQS1 362 aaPredicted RBP7.82□□□□□ -1.16
SCFD1-208ENST00000553278 A0A087X0B3 334 aa7.81□□□□□ -1.16
SCFD1-208ENST00000553278 PLD2O14939 933 aa7.81□□□□□ -1.16
SCFD1-208ENST00000553278 PDE8AO60658 829 aa7.81□□□□□ -1.16
SCFD1-208ENST00000553278 DGAT1O75907 488 aa7.81□□□□□ -1.16
SCFD1-208ENST00000553278 ADH7P40394 386 aa7.81□□□□□ -1.16
SCFD1-208ENST00000553278 PCBP4P57723 403 aaKnown RBP7.81□□□□□ -1.16
SCFD1-208ENST00000553278 C19orf57Q0VDD7 668 aa7.81□□□□□ -1.16
SCFD1-208ENST00000553278 POU4F3Q15319 338 aa7.81□□□□□ -1.16
SCFD1-208ENST00000553278 BBS9Q3SYG4 887 aa7.81□□□□□ -1.16
SCFD1-208ENST00000553278 TMEM201Q5SNT2 666 aa7.81□□□□□ -1.16
SCFD1-208ENST00000553278 GORABQ5T7V8 394 aa7.81□□□□□ -1.16
SCFD1-208ENST00000553278 FAM117BQ6P1L5 589 aa7.81□□□□□ -1.16
SCFD1-208ENST00000553278 SLC7A3Q8WY07 619 aa7.81□□□□□ -1.16
SCFD1-208ENST00000553278 LPIN3Q9BQK8 851 aa7.81□□□□□ -1.16
SCFD1-208ENST00000553278 RUSC1Q9BVN2 902 aa7.81□□□□□ -1.16
SCFD1-208ENST00000553278 KLHL3Q9UH77 587 aa7.81□□□□□ -1.16
SCFD1-208ENST00000553278 NAGPAQ9UK23 515 aa7.81□□□□□ -1.16
SCFD1-208ENST00000553278 ADAM30Q9UKF2 790 aa7.81□□□□□ -1.16
SCFD1-208ENST00000553278 EID1Q9Y6B2 187 aa7.81□□□□□ -1.16
SCFD1-208ENST00000553278 FAM86C2PA6NEL3 165 aa7.8□□□□□ -1.16
SCFD1-208ENST00000553278 RAG1P15918 1043 aa7.8□□□□□ -1.16
SCFD1-208ENST00000553278 ZNF143P52747 638 aaPredicted RBP7.8□□□□□ -1.16
SCFD1-208ENST00000553278 PIP4K2BP78356 416 aa7.8□□□□□ -1.16
SCFD1-208ENST00000553278 CBX2Q14781 532 aaPredicted RBP7.8□□□□□ -1.16
SCFD1-208ENST00000553278 PKDCCQ504Y2 493 aa7.8□□□□□ -1.16
SCFD1-208ENST00000553278 FNDC3BQ53EP0 1204 aaKnown RBP7.8□□□□□ -1.16
SCFD1-208ENST00000553278 WWC2Q6AWC2 1192 aa7.8□□□□□ -1.16
SCFD1-208ENST00000553278 CCDC146Q8IYE0 955 aa7.8□□□□□ -1.16
SCFD1-208ENST00000553278 CRIPAKQ8N1N5 446 aa7.8□□□□□ -1.16
SCFD1-208ENST00000553278 KLHL6Q8WZ60 621 aa7.8□□□□□ -1.16
SCFD1-208ENST00000553278 WNT8BQ93098 351 aa7.8□□□□□ -1.16
SCFD1-208ENST00000553278 DHRS1Q96LJ7 313 aa7.8□□□□□ -1.16
SCFD1-208ENST00000553278 CCDC86Q9H6F5 360 aaKnown RBP7.8□□□□□ -1.16
SCFD1-208ENST00000553278 NCOA5Q9HCD5 579 aaKnown RBP7.8□□□□□ -1.16
SCFD1-208ENST00000553278 GABBR1Q9UBS5 961 aa7.8□□□□□ -1.16
SCFD1-208ENST00000553278 ZNF214Q9UL59 606 aaPredicted RBP7.8□□□□□ -1.16
SCFD1-208ENST00000553278 MAPRE3Q9UPY8 281 aa7.8□□□□□ -1.16
SCFD1-208ENST00000553278 LOC102724159A0A0B4J2E5 919 aa7.79□□□□□ -1.16
SCFD1-208ENST00000553278 ADARB2-AS1A8MUL3 147 aa7.79□□□□□ -1.16
SCFD1-208ENST00000553278 PRC1O43663 620 aa7.79□□□□□ -1.16
SCFD1-208ENST00000553278 POU3F3P20264 500 aaPredicted RBP7.79□□□□□ -1.16
SCFD1-208ENST00000553278 PDE3AQ14432 1141 aa7.79□□□□□ -1.16
SCFD1-208ENST00000553278 PWP2Q15269 919 aaKnown RBP7.79□□□□□ -1.16
SCFD1-208ENST00000553278 SV2CQ496J9 727 aa7.79□□□□□ -1.16
SCFD1-208ENST00000553278 PSAPL1Q6NUJ1 521 aa7.79□□□□□ -1.16
SCFD1-208ENST00000553278 TREML4Q6UXN2 200 aa7.79□□□□□ -1.16
SCFD1-208ENST00000553278 CYFIP1Q7L576 1253 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms