RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 UBAC1Q9BSL1 405 aa23.06■■□□□ 1.28
SSH1-209ENST00000551165 RBM27Q9P2N5 1060 aaKnown RBP23.06■■□□□ 1.28
SSH1-209ENST00000551165 RESTQ13127 1097 aa23.05■■□□□ 1.28
SSH1-209ENST00000551165 TEX11Q8IYF3 940 aa23.05■■□□□ 1.28
SSH1-209ENST00000551165 ENAHQ8N8S7 591 aaPredicted RBP23.05■■□□□ 1.28
SSH1-209ENST00000551165 ORC3Q9UBD5 711 aaPredicted RBP23.05■■□□□ 1.28
SSH1-209ENST00000551165 TTF2Q9UNY4 1162 aaKnown RBP23.05■■□□□ 1.28
SSH1-209ENST00000551165 SCN9AQ15858 1988 aa23.05■■□□□ 1.28
SSH1-209ENST00000551165 ADAMTSL1Q8N6G6 1762 aa23.05■■□□□ 1.28
SSH1-209ENST00000551165 GOLGA8AA7E2F4 631 aa23.05■■□□□ 1.28
SSH1-209ENST00000551165 DPEP1P16444 411 aa23.05■■□□□ 1.28
SSH1-209ENST00000551165 AIFM3Q96NN9 605 aa23.05■■□□□ 1.28
SSH1-209ENST00000551165 ATP6V1DQ9Y5K8 247 aa23.05■■□□□ 1.28
SSH1-209ENST00000551165 DHX16O60231 1041 aaKnown RBP23.04■■□□□ 1.28
SSH1-209ENST00000551165 SART3Q15020 963 aaKnown RBP23.04■■□□□ 1.28
SSH1-209ENST00000551165 NTRK3Q16288 839 aa23.04■■□□□ 1.28
SSH1-209ENST00000551165 SLC44A5Q8NCS7 719 aa23.04■■□□□ 1.28
SSH1-209ENST00000551165 ZSCAN10Q96SZ4 725 aaPredicted RBP23.04■■□□□ 1.28
SSH1-209ENST00000551165 ATF5Q9Y2D1 282 aaPredicted RBP23.04■■□□□ 1.28
SSH1-209ENST00000551165 ERICH2A1L162 156 aa23.04■■□□□ 1.28
SSH1-209ENST00000551165 ECE2O60344 883 aa23.04■■□□□ 1.28
SSH1-209ENST00000551165 CAVIN1Q6NZI2 390 aaKnown RBP23.04■■□□□ 1.28
SSH1-209ENST00000551165 TFIP11Q9UBB9 837 aaKnown RBP23.04■■□□□ 1.28
SSH1-209ENST00000551165 TAOK2Q9UL54 1235 aa23.04■■□□□ 1.28
SSH1-209ENST00000551165 CMTR1Q8N1G2 835 aaKnown RBP23.03■■□□□ 1.28
SSH1-209ENST00000551165 SLC16A10Q8TF71 515 aa23.03■■□□□ 1.28
SSH1-209ENST00000551165 NAV1Q8NEY1 1877 aa23.03■■□□□ 1.28
SSH1-209ENST00000551165 ORC4O43929 436 aa23.03■■□□□ 1.28
SSH1-209ENST00000551165 PODNQ7Z5L7 613 aa23.03■■□□□ 1.28
SSH1-209ENST00000551165 PCDHAC2Q9Y5I4 1007 aa23.03■■□□□ 1.28
SSH1-209ENST00000551165 PDIA4P13667 645 aaKnown RBP23.02■■□□□ 1.28
SSH1-209ENST00000551165 TMEM87AQ8NBN3 555 aa23.02■■□□□ 1.28
SSH1-209ENST00000551165 FLT1P17948 1338 aa23.02■■□□□ 1.28
SSH1-209ENST00000551165 ZNF654Q8IZM8 581 aa23.01■■□□□ 1.27
SSH1-209ENST00000551165 NUP133Q8WUM0 1156 aa23.01■■□□□ 1.27
SSH1-209ENST00000551165 TTLL6Q8N841 843 aa23.01■■□□□ 1.27
SSH1-209ENST00000551165 MTA3Q9BTC8 594 aa23.01■■□□□ 1.27
SSH1-209ENST00000551165 PCP11498 1178 aaKnown RBP23■■□□□ 1.27
SSH1-209ENST00000551165 SLF2Q8IX21 1173 aa23■■□□□ 1.27
SSH1-209ENST00000551165 POLR3DP05423 398 aaPredicted RBP23■■□□□ 1.27
SSH1-209ENST00000551165 PDE4BQ07343 736 aa23■■□□□ 1.27
SSH1-209ENST00000551165 KIAA0825Q8IV33 1275 aa23■■□□□ 1.27
SSH1-209ENST00000551165 CCDC82Q8N4S0 544 aa23■■□□□ 1.27
SSH1-209ENST00000551165 CHMP4CQ96CF2 233 aa23■■□□□ 1.27
SSH1-209ENST00000551165 DLEC1Q9Y238 1755 aa22.99■■□□□ 1.27
SSH1-209ENST00000551165 SLC3A2P08195 630 aaKnown RBP22.99■■□□□ 1.27
SSH1-209ENST00000551165 DACT2Q5SW24 774 aa22.99■■□□□ 1.27
SSH1-209ENST00000551165 SYNE3Q6ZMZ3 975 aa22.99■■□□□ 1.27
SSH1-209ENST00000551165 ILDR1Q86SU0 546 aaPredicted RBP22.99■■□□□ 1.27
SSH1-209ENST00000551165 TTC6Q86TZ1 520 aa22.99■■□□□ 1.27
SSH1-209ENST00000551165 TMEM63CQ9P1W3 806 aa22.99■■□□□ 1.27
SSH1-209ENST00000551165 SUGT1Q9Y2Z0 365 aa22.99■■□□□ 1.27
SSH1-209ENST00000551165 KIF3AQ9Y496 699 aa22.99■■□□□ 1.27
SSH1-209ENST00000551165 KIAA2012Q0VF49 1180 aa22.99■■□□□ 1.27
SSH1-209ENST00000551165 PICALMQ13492 652 aa22.99■■□□□ 1.27
SSH1-209ENST00000551165 IQCA1Q86XH1 822 aa22.99■■□□□ 1.27
SSH1-209ENST00000551165 TMTC2Q8N394 836 aa22.99■■□□□ 1.27
SSH1-209ENST00000551165 TSPY2A6NKD2 308 aa22.98■■□□□ 1.27
SSH1-209ENST00000551165 RTN1Q16799 776 aa22.98■■□□□ 1.27
SSH1-209ENST00000551165 IFIT1BQ5T764 474 aaKnown RBP22.98■■□□□ 1.27
SSH1-209ENST00000551165 C8orf76Q96K31 380 aa22.98■■□□□ 1.27
SSH1-209ENST00000551165 DDX4Q9NQI0 724 aaKnown RBP22.98■■□□□ 1.27
SSH1-209ENST00000551165 YDJCA8MPS7 323 aa22.98■■□□□ 1.27
SSH1-209ENST00000551165 PLCG2P16885 1265 aa22.98■■□□□ 1.27
SSH1-209ENST00000551165 TFAP4Q01664 338 aa22.98■■□□□ 1.27
SSH1-209ENST00000551165 GAS2L3Q86XJ1 694 aa22.98■■□□□ 1.27
SSH1-209ENST00000551165 CCDC125Q86Z20 511 aa22.98■■□□□ 1.27
SSH1-209ENST00000551165 FANCBQ8NB91 859 aa22.98■■□□□ 1.27
SSH1-209ENST00000551165 FTOQ9C0B1 505 aaKnown RBP eCLIP22.98■■□□□ 1.27
SSH1-209ENST00000551165 ZNF646O15015 1829 aaPredicted RBP22.98■■□□□ 1.27
SSH1-209ENST00000551165 DDX60LQ5H9U9 1706 aaKnown RBP22.97■■□□□ 1.27
SSH1-209ENST00000551165 NID2Q14112 1375 aa22.97■■□□□ 1.27
SSH1-209ENST00000551165 ROBO3Q96MS0 1386 aa22.97■■□□□ 1.27
SSH1-209ENST00000551165 GUCY1A2P33402 732 aa22.97■■□□□ 1.27
SSH1-209ENST00000551165 KRT85P78386 507 aa22.97■■□□□ 1.27
SSH1-209ENST00000551165 FBXO18Q8NFZ0 1043 aa22.97■■□□□ 1.27
SSH1-209ENST00000551165 SLC26A6Q9BXS9 759 aa22.97■■□□□ 1.27
SSH1-209ENST00000551165 IL17RBQ9NRM6 502 aa22.97■■□□□ 1.27
SSH1-209ENST00000551165 PPIP5K2O43314 1243 aa22.97■■□□□ 1.27
SSH1-209ENST00000551165 WDHD1O75717 1129 aaPredicted RBP22.97■■□□□ 1.27
SSH1-209ENST00000551165 IARSP41252 1262 aaKnown RBP22.97■■□□□ 1.27
SSH1-209ENST00000551165 STRIP1Q5VSL9 837 aa22.97■■□□□ 1.27
SSH1-209ENST00000551165 RCSD1Q6JBY9 416 aa22.97■■□□□ 1.27
SSH1-209ENST00000551165 APOBEC3HQ6NTF7 200 aaKnown RBP22.97■■□□□ 1.27
SSH1-209ENST00000551165 ECM29Q5VYK3 1845 aa22.96■■□□□ 1.27
SSH1-209ENST00000551165 USP17L3A6NCW0 530 aa22.96■■□□□ 1.27
SSH1-209ENST00000551165 USP17L4A6NCW7 530 aa22.96■■□□□ 1.27
SSH1-209ENST00000551165 R3HDM1Q15032 1099 aaKnown RBP22.96■■□□□ 1.27
SSH1-209ENST00000551165 USP17L1Q7RTZ2 530 aa22.96■■□□□ 1.27
SSH1-209ENST00000551165 ALG1Q9BT22 464 aa22.96■■□□□ 1.27
SSH1-209ENST00000551165 MKNK2Q9HBH9 465 aa22.96■■□□□ 1.27
SSH1-209ENST00000551165 USP40Q9NVE5 1235 aa22.96■■□□□ 1.27
SSH1-209ENST00000551165 CRKP46108 304 aa22.96■■□□□ 1.27
SSH1-209ENST00000551165 CDC42EP5Q6NZY7 148 aa22.96■■□□□ 1.27
SSH1-209ENST00000551165 NBPF11Q86T75 865 aa22.96■■□□□ 1.27
SSH1-209ENST00000551165 CERS3Q8IU89 383 aa22.96■■□□□ 1.27
SSH1-209ENST00000551165 ZSCAN16Q9H4T2 348 aaPredicted RBP22.96■■□□□ 1.27
SSH1-209ENST00000551165 MYH1P12882 1939 aa22.95■■□□□ 1.26
SSH1-209ENST00000551165 UTRNP46939 3433 aa22.95■■□□□ 1.26
SSH1-209ENST00000551165 CDKL5O76039 1030 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms