RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 APOBEC3HQ6NTF7 200 aaKnown RBP24.16■■□□□ 1.46
CTDSP2-204ENST00000548823 TBC1D9Q6ZT07 1266 aa24.16■■□□□ 1.46
CTDSP2-204ENST00000548823 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.16■■□□□ 1.46
CTDSP2-204ENST00000548823 TDHQ8IZJ6 230 aa24.16■■□□□ 1.46
CTDSP2-204ENST00000548823 BICC1Q9H694 974 aaKnown RBP24.16■■□□□ 1.46
CTDSP2-204ENST00000548823 CXCL11O14625 94 aa24.16■■□□□ 1.46
CTDSP2-204ENST00000548823 RABL6Q3YEC7 729 aaPredicted RBP24.16■■□□□ 1.46
CTDSP2-204ENST00000548823 NOL9Q5SY16 702 aaKnown RBP24.16■■□□□ 1.46
CTDSP2-204ENST00000548823 ANKLE1Q8NAG6 615 aa24.16■■□□□ 1.46
CTDSP2-204ENST00000548823 DIS3LQ8TF46 1054 aaKnown RBP24.16■■□□□ 1.46
CTDSP2-204ENST00000548823 FBXO33Q7Z6M2 555 aa24.15■■□□□ 1.46
CTDSP2-204ENST00000548823 C22orf23Q9BZE7 217 aa24.15■■□□□ 1.46
CTDSP2-204ENST00000548823 AK9Q5TCS8 1911 aa24.14■■□□□ 1.46
CTDSP2-204ENST00000548823 TNPO2O14787 897 aaKnown RBP24.14■■□□□ 1.45
CTDSP2-204ENST00000548823 RBM25P49756 843 aaKnown RBP24.14■■□□□ 1.45
CTDSP2-204ENST00000548823 CHAF1AQ13111 956 aaPredicted RBP24.14■■□□□ 1.45
CTDSP2-204ENST00000548823 VPS37DQ86XT2 251 aa24.14■■□□□ 1.45
CTDSP2-204ENST00000548823 IQSEC3Q9UPP2 1182 aaPredicted RBP24.14■■□□□ 1.45
CTDSP2-204ENST00000548823 SDSP20132 328 aa24.13■■□□□ 1.45
CTDSP2-204ENST00000548823 MAGEA10P43363 369 aaPredicted RBP24.13■■□□□ 1.45
CTDSP2-204ENST00000548823 MFAP1P55081 439 aaKnown RBP24.13■■□□□ 1.45
CTDSP2-204ENST00000548823 EPHA10Q5JZY3 1008 aa24.13■■□□□ 1.45
CTDSP2-204ENST00000548823 FAM151AQ8WW52 585 aa24.13■■□□□ 1.45
CTDSP2-204ENST00000548823 MAST3O60307 1309 aa24.12■■□□□ 1.45
CTDSP2-204ENST00000548823 FRAT2O75474 233 aaPredicted RBP24.12■■□□□ 1.45
CTDSP2-204ENST00000548823 HHIPL2Q6UWX4 724 aa24.12■■□□□ 1.45
CTDSP2-204ENST00000548823 ERICH6Q7L0X2 663 aa24.12■■□□□ 1.45
CTDSP2-204ENST00000548823 FASTKD5Q7L8L6 764 aaKnown RBP24.12■■□□□ 1.45
CTDSP2-204ENST00000548823 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.12■■□□□ 1.451e-8■■■□□ 15.3
CTDSP2-204ENST00000548823 SUGT1Q9Y2Z0 365 aa24.12■■□□□ 1.45
CTDSP2-204ENST00000548823 DOCK3Q8IZD9 2030 aa24.11■■□□□ 1.45
CTDSP2-204ENST00000548823 CASC1Q6TDU7 716 aa24.11■■□□□ 1.45
CTDSP2-204ENST00000548823 NBPF3Q9H094 633 aa24.11■■□□□ 1.45
CTDSP2-204ENST00000548823 SLC45A1Q9Y2W3 748 aa24.11■■□□□ 1.45
CTDSP2-204ENST00000548823 SYN1P17600 705 aa24.1■■□□□ 1.45
CTDSP2-204ENST00000548823 UBE2OQ9C0C9 1292 aaKnown RBP24.1■■□□□ 1.45
CTDSP2-204ENST00000548823 COPRSQ9NQ92 184 aa24.1■■□□□ 1.45
CTDSP2-204ENST00000548823 TTC41PQ6P2S7 1318 aa24.09■■□□□ 1.45
CTDSP2-204ENST00000548823 A0A0G2JLL6 359 aaPredicted RBP24.09■■□□□ 1.45
CTDSP2-204ENST00000548823 CAVIN4Q5BKX8 364 aa24.09■■□□□ 1.45
CTDSP2-204ENST00000548823 PRRT2Q7Z6L0 340 aaPredicted RBP24.09■■□□□ 1.45
CTDSP2-204ENST00000548823 COA7Q96BR5 231 aa24.09■■□□□ 1.45
CTDSP2-204ENST00000548823 TAOK2Q9UL54 1235 aa24.09■■□□□ 1.45
CTDSP2-204ENST00000548823 RPTORQ8N122 1335 aa24.08■■□□□ 1.45
CTDSP2-204ENST00000548823 G3BP1Q13283 466 aaKnown RBP eCLIP24.08■■□□□ 1.45
CTDSP2-204ENST00000548823 OS9Q13438 667 aaPredicted RBP24.08■■□□□ 1.45
CTDSP2-204ENST00000548823 CLASRPQ8N2M8 674 aaKnown RBP24.08■■□□□ 1.45
CTDSP2-204ENST00000548823 PUS3Q9BZE2 481 aaKnown RBP24.08■■□□□ 1.45
CTDSP2-204ENST00000548823 IL1RAPL2Q9NP60 686 aa24.08■■□□□ 1.45
CTDSP2-204ENST00000548823 MROH5Q6ZUA9 1318 aa24.07■■□□□ 1.44
CTDSP2-204ENST00000548823 BECN1Q14457 450 aa24.07■■□□□ 1.44
CTDSP2-204ENST00000548823 RFX5P48382 616 aaPredicted RBP24.06■■□□□ 1.44
CTDSP2-204ENST00000548823 TCP10Q12799 353 aa24.06■■□□□ 1.44
CTDSP2-204ENST00000548823 SMCR8Q8TEV9 937 aaPredicted RBP24.06■■□□□ 1.44
CTDSP2-204ENST00000548823 C11orf49Q9H6J7 331 aa24.06■■□□□ 1.44
CTDSP2-204ENST00000548823 ZHX2Q9Y6X8 837 aa24.06■■□□□ 1.44
CTDSP2-204ENST00000548823 FAM109BQ6ICB4 259 aaPredicted RBP24.05■■□□□ 1.44
CTDSP2-204ENST00000548823 GADL1Q6ZQY3 521 aa24.05■■□□□ 1.44
CTDSP2-204ENST00000548823 DAXXQ9UER7 740 aaPredicted RBP24.05■■□□□ 1.44
CTDSP2-204ENST00000548823 POTEB2H3BUK9 544 aa24.04■■□□□ 1.44
CTDSP2-204ENST00000548823 PA2G4Q9UQ80 394 aaKnown RBP24.04■■□□□ 1.44
CTDSP2-204ENST00000548823 DDX60LQ5H9U9 1706 aaKnown RBP24.04■■□□□ 1.44
CTDSP2-204ENST00000548823 HMGCRP04035 888 aa24.03■■□□□ 1.44
CTDSP2-204ENST00000548823 PI4K2BQ8TCG2 481 aa24.03■■□□□ 1.44
CTDSP2-204ENST00000548823 GUCD1Q96NT3 240 aa24.03■■□□□ 1.44
CTDSP2-204ENST00000548823 HMX1Q9NP08 348 aaPredicted RBP24.03■■□□□ 1.44
CTDSP2-204ENST00000548823 AFG3L2Q9Y4W6 797 aa24.03■■□□□ 1.44
CTDSP2-204ENST00000548823 VCANP13611 3396 aa24.03■■□□□ 1.44
CTDSP2-204ENST00000548823 PTPRAP18433 802 aa24.03■■□□□ 1.44
CTDSP2-204ENST00000548823 SCYL3Q8IZE3 742 aa24.03■■□□□ 1.44
CTDSP2-204ENST00000548823 GPATCH3Q96I76 525 aa24.03■■□□□ 1.44
CTDSP2-204ENST00000548823 PRDM6Q9NQX0 595 aa24.03■■□□□ 1.44
CTDSP2-204ENST00000548823 PICK1Q9NRD5 415 aa24.03■■□□□ 1.44
CTDSP2-204ENST00000548823 PTPRFP10586 1907 aa24.02■■□□□ 1.44
CTDSP2-204ENST00000548823 PHF20L1A8MW92 1017 aa24.02■■□□□ 1.44
CTDSP2-204ENST00000548823 ERC2O15083 957 aa24.02■■□□□ 1.44
CTDSP2-204ENST00000548823 NFIAQ12857 509 aa24.02■■□□□ 1.44
CTDSP2-204ENST00000548823 CDC42EP5Q6NZY7 148 aa24.02■■□□□ 1.44
CTDSP2-204ENST00000548823 ANKRD13CQ8N6S4 541 aa24.02■■□□□ 1.44
CTDSP2-204ENST00000548823 OGDHLQ9ULD0 1010 aa24.02■■□□□ 1.44
CTDSP2-204ENST00000548823 GLRX3O76003 335 aaKnown RBP24.01■■□□□ 1.43
CTDSP2-204ENST00000548823 FAM110CQ1W6H9 321 aa24.01■■□□□ 1.43
CTDSP2-204ENST00000548823 EPB41L2O43491 1005 aaKnown RBP24■■□□□ 1.43
CTDSP2-204ENST00000548823 REC8O95072 547 aa24■■□□□ 1.43
CTDSP2-204ENST00000548823 BCL11AQ9H165 835 aa24■■□□□ 1.43
CTDSP2-204ENST00000548823 FAM198AQ9UFP1 575 aa24■■□□□ 1.43
CTDSP2-204ENST00000548823 DAGLAQ9Y4D2 1042 aa24■■□□□ 1.43
CTDSP2-204ENST00000548823 PDE8BO95263 885 aa23.99■■□□□ 1.43
CTDSP2-204ENST00000548823 IFIT2P09913 472 aaKnown RBP23.99■■□□□ 1.43
CTDSP2-204ENST00000548823 METTL24Q5JXM2 366 aa23.99■■□□□ 1.43
CTDSP2-204ENST00000548823 ECHDC1Q9NTX5 307 aa23.99■■□□□ 1.43
CTDSP2-204ENST00000548823 AGTPBP1Q9UPW5 1226 aa23.99■■□□□ 1.43
CTDSP2-204ENST00000548823 VGLL2Q8N8G2 317 aa23.98■■□□□ 1.43
CTDSP2-204ENST00000548823 WDR66Q8TBY9 1149 aa23.98■■□□□ 1.43
CTDSP2-204ENST00000548823 USP26Q9BXU7 913 aa23.98■■□□□ 1.43
CTDSP2-204ENST00000548823 FBXO3Q9UK99 471 aa23.98■■□□□ 1.43
CTDSP2-204ENST00000548823 ATRNL1Q5VV63 1379 aa23.97■■□□□ 1.43
CTDSP2-204ENST00000548823 GJD2Q9UKL4 321 aa23.97■■□□□ 1.43
CTDSP2-204ENST00000548823 PNMA3Q9UL41 463 aa23.97■■□□□ 1.43
CTDSP2-204ENST00000548823 PFASO15067 1338 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms