RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 SMTNP53814 917 aa7.77□□□□□ -1.17
SRGAP1-206ENST00000543397 PRPF4BQ13523 1007 aaKnown RBP7.77□□□□□ -1.17
SRGAP1-206ENST00000543397 TSNAXIP1Q2TAA8 658 aa7.77□□□□□ -1.17
SRGAP1-206ENST00000543397 USP25Q9UHP3 1055 aa7.77□□□□□ -1.17
SRGAP1-206ENST00000543397 PTPN14Q15678 1187 aa7.77□□□□□ -1.17
SRGAP1-206ENST00000543397 LONRF3Q496Y0 759 aa7.77□□□□□ -1.17
SRGAP1-206ENST00000543397 LRSAM1Q6UWE0 723 aa7.77□□□□□ -1.17
SRGAP1-206ENST00000543397 DPH6Q7L8W6 267 aa7.77□□□□□ -1.17
SRGAP1-206ENST00000543397 ZNF354CQ86Y25 554 aa7.77□□□□□ -1.17
SRGAP1-206ENST00000543397 FNBP4Q8N3X1 1017 aaPredicted RBP7.77□□□□□ -1.17
SRGAP1-206ENST00000543397 PLVAPQ9BX97 442 aa7.77□□□□□ -1.17
SRGAP1-206ENST00000543397 ARHGAP31Q2M1Z3 1444 aa7.77□□□□□ -1.17
SRGAP1-206ENST00000543397 SLC27A2O14975 620 aa7.77□□□□□ -1.17
SRGAP1-206ENST00000543397 PDE8BO95263 885 aa7.77□□□□□ -1.17
SRGAP1-206ENST00000543397 RPS6KB1P23443 525 aa7.77□□□□□ -1.17
SRGAP1-206ENST00000543397 CCT6AP40227 531 aaKnown RBP7.77□□□□□ -1.17
SRGAP1-206ENST00000543397 DNM1Q05193 864 aaKnown RBP7.77□□□□□ -1.17
SRGAP1-206ENST00000543397 CCDC65Q8IXS2 484 aa7.77□□□□□ -1.17
SRGAP1-206ENST00000543397 UBXN4Q92575 508 aa7.77□□□□□ -1.17
SRGAP1-206ENST00000543397 IFT74Q96LB3 600 aa7.77□□□□□ -1.17
SRGAP1-206ENST00000543397 CNPY2Q9Y2B0 182 aa7.77□□□□□ -1.17
SRGAP1-206ENST00000543397 PRDM15P57071 1507 aaPredicted RBP7.77□□□□□ -1.17
SRGAP1-206ENST00000543397 VWA3AA6NCI4 1184 aa7.77□□□□□ -1.17
SRGAP1-206ENST00000543397 HARSP12081 509 aaKnown RBP7.77□□□□□ -1.17
SRGAP1-206ENST00000543397 BTDP43251 543 aa7.77□□□□□ -1.17
SRGAP1-206ENST00000543397 AKNAD1Q5T1N1 836 aa7.77□□□□□ -1.17
SRGAP1-206ENST00000543397 BEND3Q5T5X7 828 aa7.77□□□□□ -1.17
SRGAP1-206ENST00000543397 GADL1Q6ZQY3 521 aa7.77□□□□□ -1.17
SRGAP1-206ENST00000543397 ATP6V1E2Q96A05 226 aa7.77□□□□□ -1.17
SRGAP1-206ENST00000543397 PLIN2Q99541 437 aa7.77□□□□□ -1.17
SRGAP1-206ENST00000543397 COMMD10Q9Y6G5 202 aa7.77□□□□□ -1.17
SRGAP1-206ENST00000543397 BLMP54132 1417 aaPredicted RBP7.77□□□□□ -1.17
SRGAP1-206ENST00000543397 BICDL2A1A5D9 508 aa7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 M0QZ92 97 aa7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 RPL13P26373 211 aaKnown RBP7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 ZNF174Q15697 407 aa7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 CERKLQ49MI3 558 aaPredicted RBP7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 PIK3AP1Q6ZUJ8 805 aa7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 TTLL6Q8N841 843 aa7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 ZNF513Q8N8E2 541 aaPredicted RBP7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 JCADQ9P266 1359 aa7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 CCDC169A6NNP5 214 aa7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 SGSM2O43147 1006 aa7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 PPARAQ07869 468 aa7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 NONOQ15233 471 aaKnown RBP eCLIP7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 IFI16Q16666 785 aaKnown RBP7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 SUPT20HL1Q3ZLR7 823 aa7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 GIPC2Q8TF65 315 aa7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 MYCBPQ99417 103 aaPredicted RBP7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 TRIM6Q9C030 488 aaPredicted RBP7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 DACT1Q9NYF0 836 aa7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 ERVV-1B6SEH8 477 aa7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 NEMFO60524 1076 aa7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 PLCD1P51178 756 aa7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 FAM47AQ5JRC9 791 aa7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 SV2BQ7L1I2 683 aa7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 GET4Q7L5D6 327 aaPredicted RBP7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 SSH3Q8TE77 659 aa7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 TAOK3Q9H2K8 898 aa7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 DBNDD1Q9H9R9 158 aa7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 CEP83Q9Y592 693 aa7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 ARHGEF35A5YM69 484 aa7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 CPA1P15085 419 aa7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 PDE6AP16499 860 aa7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 ABL2P42684 1182 aa7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 ICA1Q05084 483 aa7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 GNPTABQ3T906 1256 aa7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 ERFEQ4G0M1 354 aa7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 LRRC24Q50LG9 513 aa7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 KRT25Q7Z3Z0 450 aa7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 HS6ST3Q8IZP7 471 aa7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 MSANTD4Q8NCY6 345 aa7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 FNBP1Q96RU3 617 aa7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 HEG1Q9ULI3 1381 aa7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 H0YHG0 523 aa7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 SEMA3EO15041 775 aa7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 DNM2P50570 870 aa7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 PROSER3Q2NL68 480 aa7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 SRP68Q9UHB9 627 aaKnown RBP7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.76□□□□□ -1.17
SRGAP1-206ENST00000543397 KIF1BO60333 1816 aa7.75□□□□□ -1.17
SRGAP1-206ENST00000543397 CLRN2A0PK11 232 aa7.75□□□□□ -1.17
SRGAP1-206ENST00000543397 CCNT1O60563 726 aaKnown RBP7.75□□□□□ -1.17
SRGAP1-206ENST00000543397 RPS6KA4O75676 772 aa7.75□□□□□ -1.17
SRGAP1-206ENST00000543397 NPR1P16066 1061 aa7.75□□□□□ -1.17
SRGAP1-206ENST00000543397 PAX3P23760 479 aa7.75□□□□□ -1.17
SRGAP1-206ENST00000543397 HSP90AA4PQ58FG1 418 aa7.75□□□□□ -1.17
SRGAP1-206ENST00000543397 GIMAP6Q6P9H5 292 aa7.75□□□□□ -1.17
SRGAP1-206ENST00000543397 RTKN2Q8IZC4 609 aa7.75□□□□□ -1.17
SRGAP1-206ENST00000543397 LRRC45Q96CN5 670 aa7.75□□□□□ -1.17
SRGAP1-206ENST00000543397 MRRFQ96E11 262 aaKnown RBP7.75□□□□□ -1.17
SRGAP1-206ENST00000543397 GJD4Q96KN9 370 aaPredicted RBP7.75□□□□□ -1.17
SRGAP1-206ENST00000543397 RNF216Q9NWF9 866 aaPredicted RBP7.75□□□□□ -1.17
SRGAP1-206ENST00000543397 DDX39AO00148 427 aaKnown RBP7.75□□□□□ -1.17
SRGAP1-206ENST00000543397 CREB3O43889 395 aa7.75□□□□□ -1.17
SRGAP1-206ENST00000543397 URI1O94763 535 aaPredicted RBP7.75□□□□□ -1.17
SRGAP1-206ENST00000543397 TXKP42681 527 aa7.75□□□□□ -1.17
SRGAP1-206ENST00000543397 UBASH3AP57075 661 aa7.75□□□□□ -1.17
SRGAP1-206ENST00000543397 BIRC3Q13489 604 aa7.75□□□□□ -1.17
SRGAP1-206ENST00000543397 DIS3L2Q8IYB7 885 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms