RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 RAB11FIP3O75154 756 aa24.65■■□□□ 1.54
DDB1-220ENST00000542337 IFIT2P09913 472 aaKnown RBP24.65■■□□□ 1.54
DDB1-220ENST00000542337 HOXD10P28358 340 aa24.65■■□□□ 1.54
DDB1-220ENST00000542337 PRMT2P55345 433 aa24.65■■□□□ 1.54
DDB1-220ENST00000542337 MAPKAPK5Q8IW41 473 aa24.65■■□□□ 1.54
DDB1-220ENST00000542337 DOCK2Q92608 1830 aa24.65■■□□□ 1.54
DDB1-220ENST00000542337 PDE3AQ14432 1141 aa24.64■■□□□ 1.54
DDB1-220ENST00000542337 TTF1Q15361 905 aaPredicted RBP24.64■■□□□ 1.54
DDB1-220ENST00000542337 SLC9C1Q4G0N8 1177 aa24.64■■□□□ 1.54
DDB1-220ENST00000542337 GPAT2Q6NUI2 795 aa24.64■■□□□ 1.54
DDB1-220ENST00000542337 ADGRA1Q86SQ6 560 aa24.64■■□□□ 1.54
DDB1-220ENST00000542337 FOXP4Q8IVH2 680 aaPredicted RBP24.64■■□□□ 1.54
DDB1-220ENST00000542337 CRACR2BQ8N4Y2 399 aaPredicted RBP24.64■■□□□ 1.54
DDB1-220ENST00000542337 MAGEB6Q8N7X4 407 aa24.64■■□□□ 1.54
DDB1-220ENST00000542337 ARMC5Q96C12 935 aa24.64■■□□□ 1.54
DDB1-220ENST00000542337 SLC45A1Q9Y2W3 748 aa24.64■■□□□ 1.54
DDB1-220ENST00000542337 HLA-DOAP06340 250 aa24.63■■□□□ 1.53
DDB1-220ENST00000542337 CAP2P40123 477 aa24.63■■□□□ 1.53
DDB1-220ENST00000542337 CAP1Q01518 475 aa24.63■■□□□ 1.53
DDB1-220ENST00000542337 TMEM106CQ9BVX2 250 aa24.63■■□□□ 1.53
DDB1-220ENST00000542337 BCL11AQ9H165 835 aa24.63■■□□□ 1.53
DDB1-220ENST00000542337 PTCH2Q9Y6C5 1203 aa24.63■■□□□ 1.53
DDB1-220ENST00000542337 FLT1P17948 1338 aa24.62■■□□□ 1.53
DDB1-220ENST00000542337 FMNL1O95466 1100 aaPredicted RBP24.62■■□□□ 1.53
DDB1-220ENST00000542337 PSMC4P43686 418 aa24.62■■□□□ 1.53
DDB1-220ENST00000542337 ARHGAP39Q9C0H5 1083 aa24.62■■□□□ 1.53
DDB1-220ENST00000542337 AS3MTQ9HBK9 375 aa24.62■■□□□ 1.53
DDB1-220ENST00000542337 USP17L5A8MUK1 530 aa24.61■■□□□ 1.53
DDB1-220ENST00000542337 CYP2C8P10632 490 aa24.61■■□□□ 1.53
DDB1-220ENST00000542337 USP5P45974 858 aa24.61■■□□□ 1.53
DDB1-220ENST00000542337 ZNF280CQ8ND82 737 aa24.61■■□□□ 1.53
DDB1-220ENST00000542337 NDUFB9Q9Y6M9 179 aa24.61■■□□□ 1.53
DDB1-220ENST00000542337 DYNLL1P63167 89 aaKnown RBP24.6■■□□□ 1.53
DDB1-220ENST00000542337 SPP2Q13103 211 aa24.6■■□□□ 1.53
DDB1-220ENST00000542337 SIRT2Q8IXJ6 389 aa24.6■■□□□ 1.53
DDB1-220ENST00000542337 MIGA1Q8NAN2 632 aa24.6■■□□□ 1.53
DDB1-220ENST00000542337 SMCR8Q8TEV9 937 aaPredicted RBP24.6■■□□□ 1.53
DDB1-220ENST00000542337 PNMA3Q9UL41 463 aa24.6■■□□□ 1.53
DDB1-220ENST00000542337 PALD1Q9ULE6 856 aa24.6■■□□□ 1.53
DDB1-220ENST00000542337 AGTPBP1Q9UPW5 1226 aa24.6■■□□□ 1.53
DDB1-220ENST00000542337 ADGRA2Q96PE1 1338 aa24.6■■□□□ 1.53
DDB1-220ENST00000542337 ECM2O94769 699 aaPredicted RBP24.59■■□□□ 1.53
DDB1-220ENST00000542337 ASNSP08243 561 aa24.59■■□□□ 1.53
DDB1-220ENST00000542337 PABPC4Q13310 644 aaKnown RBP eCLIP24.59■■□□□ 1.53
DDB1-220ENST00000542337 CCDC84Q86UT8 332 aaPredicted RBP24.59■■□□□ 1.53
DDB1-220ENST00000542337 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.59■■□□□ 1.53
DDB1-220ENST00000542337 ANTXR1Q9H6X2 564 aa24.59■■□□□ 1.53
DDB1-220ENST00000542337 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.59■■□□□ 1.53
DDB1-220ENST00000542337 SAP30BPQ9UHR5 308 aaKnown RBP24.59■■□□□ 1.53
DDB1-220ENST00000542337 FCGRTP55899 365 aa24.58■■□□□ 1.53
DDB1-220ENST00000542337 PROCA1Q8NCQ7 364 aaPredicted RBP24.58■■□□□ 1.53
DDB1-220ENST00000542337 GINM1Q9NU53 330 aa24.58■■□□□ 1.53
DDB1-220ENST00000542337 MAST2Q6P0Q8 1798 aa24.57■■□□□ 1.52
DDB1-220ENST00000542337 BCRP11274 1271 aa24.57■■□□□ 1.52
DDB1-220ENST00000542337 RAET1EQ8TD07 263 aa24.57■■□□□ 1.52
DDB1-220ENST00000542337 ZNF333Q96JL9 665 aa24.57■■□□□ 1.52
DDB1-220ENST00000542337 TRIM47Q96LD4 638 aa24.57■■□□□ 1.52
DDB1-220ENST00000542337 DNAJC2Q99543 621 aaKnown RBP24.57■■□□□ 1.52
DDB1-220ENST00000542337 SRRDQ9UH36 339 aa24.57■■□□□ 1.52
DDB1-220ENST00000542337 SLC4A8Q2Y0W8 1093 aa24.56■■□□□ 1.52
DDB1-220ENST00000542337 SLC9C2Q5TAH2 1124 aa24.56■■□□□ 1.52
DDB1-220ENST00000542337 METTL16Q86W50 562 aaKnown RBP24.56■■□□□ 1.52
DDB1-220ENST00000542337 MAGEB6P1A0A0J9YX57 407 aa24.55■■□□□ 1.52
DDB1-220ENST00000542337 POTEFA5A3E0 1075 aa24.55■■□□□ 1.52
DDB1-220ENST00000542337 OSBPP22059 807 aa24.55■■□□□ 1.52
DDB1-220ENST00000542337 RRP1BQ14684 758 aaKnown RBP24.55■■□□□ 1.52
DDB1-220ENST00000542337 C20orf194Q5TEA3 1177 aa24.55■■□□□ 1.52
DDB1-220ENST00000542337 TTC6Q86TZ1 520 aa24.55■■□□□ 1.52
DDB1-220ENST00000542337 WDR18Q9BV38 432 aa24.55■■□□□ 1.52
DDB1-220ENST00000542337 TMOD4Q9NZQ9 345 aa24.55■■□□□ 1.52
DDB1-220ENST00000542337 DOCK1Q14185 1865 aa24.55■■□□□ 1.52
DDB1-220ENST00000542337 GOLIM4O00461 696 aa24.54■■□□□ 1.52
DDB1-220ENST00000542337 HMGCS2P54868 508 aa24.54■■□□□ 1.52
DDB1-220ENST00000542337 MYPNQ86TC9 1320 aa24.54■■□□□ 1.52
DDB1-220ENST00000542337 TREML2Q5T2D2 321 aa24.53■■□□□ 1.52
DDB1-220ENST00000542337 SH3TC2Q8TF17 1288 aa24.53■■□□□ 1.52
DDB1-220ENST00000542337 LRRCC1Q9C099 1032 aa24.53■■□□□ 1.52
DDB1-220ENST00000542337 PDE6AP16499 860 aa24.52■■□□□ 1.52
DDB1-220ENST00000542337 CTGFP29279 349 aa24.52■■□□□ 1.52
DDB1-220ENST00000542337 SH3D19Q5HYK7 790 aa24.52■■□□□ 1.52
DDB1-220ENST00000542337 CRNKL1Q9BZJ0 848 aaKnown RBP24.52■■□□□ 1.52
DDB1-220ENST00000542337 SERPINB13Q9UIV8 391 aa24.52■■□□□ 1.52
DDB1-220ENST00000542337 HTTP42858 3142 aa24.51■■□□□ 1.51
DDB1-220ENST00000542337 C19orf81C9J6K1 198 aa24.51■■□□□ 1.51
DDB1-220ENST00000542337 GDF11O95390 407 aa24.51■■□□□ 1.51
DDB1-220ENST00000542337 MYCP01106 439 aaPredicted RBP24.51■■□□□ 1.51
DDB1-220ENST00000542337 GCLCP48506 637 aaPredicted RBP24.51■■□□□ 1.51
DDB1-220ENST00000542337 BACE1P56817 501 aa24.51■■□□□ 1.51
DDB1-220ENST00000542337 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.51■■□□□ 1.517e-7■■□□□ 12.4
DDB1-220ENST00000542337 BOLA2Q9H3K6 86 aa24.51■■□□□ 1.51
DDB1-220ENST00000542337 DNAJC18Q9H819 358 aa24.51■■□□□ 1.51
DDB1-220ENST00000542337 PAG1Q9NWQ8 432 aa24.51■■□□□ 1.51
DDB1-220ENST00000542337 BIN2Q9UBW5 565 aaPredicted RBP24.51■■□□□ 1.51
DDB1-220ENST00000542337 USP17L10C9JJH3 530 aa24.5■■□□□ 1.51
DDB1-220ENST00000542337 POLR3DP05423 398 aaPredicted RBP24.5■■□□□ 1.51
DDB1-220ENST00000542337 ATP5JP18859 108 aa24.5■■□□□ 1.51
DDB1-220ENST00000542337 EN2P19622 333 aaPredicted RBP24.5■■□□□ 1.51
DDB1-220ENST00000542337 GRK4P32298 578 aa24.5■■□□□ 1.51
DDB1-220ENST00000542337 MTMR2Q13614 643 aa24.5■■□□□ 1.51
DDB1-220ENST00000542337 ANKRD13CQ8N6S4 541 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms