RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 AGTPBP1Q9UPW5 1226 aa18.71■□□□□ 0.59
UBE3B-211ENST00000539843 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.71■□□□□ 0.59
UBE3B-211ENST00000539843 ZBED9Q6R2W3 1325 aa18.71■□□□□ 0.59
UBE3B-211ENST00000539843 ADGRA2Q96PE1 1338 aa18.71■□□□□ 0.59
UBE3B-211ENST00000539843 RBBP6Q7Z6E9 1792 aaKnown RBP18.7■□□□□ 0.58
UBE3B-211ENST00000539843 BCRP11274 1271 aa18.7■□□□□ 0.58
UBE3B-211ENST00000539843 CRACR2BQ8N4Y2 399 aaPredicted RBP18.7■□□□□ 0.58
UBE3B-211ENST00000539843 PROCA1Q8NCQ7 364 aaPredicted RBP18.7■□□□□ 0.58
UBE3B-211ENST00000539843 ZNF280CQ8ND82 737 aa18.7■□□□□ 0.58
UBE3B-211ENST00000539843 NOP58Q9Y2X3 529 aaKnown RBP18.7■□□□□ 0.58
UBE3B-211ENST00000539843 USP17L5A8MUK1 530 aa18.69■□□□□ 0.58
UBE3B-211ENST00000539843 HLA-DOAP06340 250 aa18.69■□□□□ 0.58
UBE3B-211ENST00000539843 HSP90AB4PQ58FF6 505 aa18.69■□□□□ 0.58
UBE3B-211ENST00000539843 SLAIN1Q8ND83 568 aa18.69■□□□□ 0.58
UBE3B-211ENST00000539843 SH3RF3Q8TEJ3 882 aaPredicted RBP18.69■□□□□ 0.58
UBE3B-211ENST00000539843 ZNF384Q8TF68 577 aa18.69■□□□□ 0.58
UBE3B-211ENST00000539843 DOCK1Q14185 1865 aa18.69■□□□□ 0.58
UBE3B-211ENST00000539843 TNPO2O14787 897 aaKnown RBP18.68■□□□□ 0.58
UBE3B-211ENST00000539843 ZBTB7BO15156 539 aaPredicted RBP18.68■□□□□ 0.58
UBE3B-211ENST00000539843 CAP2P40123 477 aa18.68■□□□□ 0.58
UBE3B-211ENST00000539843 TMED8Q6PL24 325 aaPredicted RBP18.68■□□□□ 0.58
UBE3B-211ENST00000539843 COA7Q96BR5 231 aa18.68■□□□□ 0.58
UBE3B-211ENST00000539843 KIAA0100Q14667 2235 aaKnown RBP18.68■□□□□ 0.58
UBE3B-211ENST00000539843 FAM196BA6NMK8 535 aa18.67■□□□□ 0.58
UBE3B-211ENST00000539843 ASNSP08243 561 aa18.67■□□□□ 0.58
UBE3B-211ENST00000539843 PPP4CP60510 307 aa18.67■□□□□ 0.58
UBE3B-211ENST00000539843 PRKCZQ05513 592 aa18.67■□□□□ 0.58
UBE3B-211ENST00000539843 SPP2Q13103 211 aa18.67■□□□□ 0.58
UBE3B-211ENST00000539843 TGFBRAP1Q8WUH2 860 aa18.67■□□□□ 0.58
UBE3B-211ENST00000539843 CHMP4BQ9H444 224 aaKnown RBP18.67■□□□□ 0.58
UBE3B-211ENST00000539843 GINM1Q9NU53 330 aa18.67■□□□□ 0.58
UBE3B-211ENST00000539843 TMOD4Q9NZQ9 345 aa18.67■□□□□ 0.58
UBE3B-211ENST00000539843 MAST2Q6P0Q8 1798 aa18.66■□□□□ 0.58
UBE3B-211ENST00000539843 IDH1O75874 414 aaKnown RBP18.66■□□□□ 0.58
UBE3B-211ENST00000539843 CYP2E1P05181 493 aaPredicted RBP18.66■□□□□ 0.58
UBE3B-211ENST00000539843 ZAP70P43403 619 aa18.66■□□□□ 0.58
UBE3B-211ENST00000539843 GCLCP48506 637 aaPredicted RBP18.66■□□□□ 0.58
UBE3B-211ENST00000539843 FOXP4Q8IVH2 680 aaPredicted RBP18.66■□□□□ 0.58
UBE3B-211ENST00000539843 MAPKAPK5Q8IW41 473 aa18.66■□□□□ 0.58
UBE3B-211ENST00000539843 CCDC8Q9H0W5 538 aaPredicted RBP18.66■□□□□ 0.58
UBE3B-211ENST00000539843 FLT1P17948 1338 aa18.66■□□□□ 0.58
UBE3B-211ENST00000539843 HMMRO75330 724 aa18.65■□□□□ 0.58
UBE3B-211ENST00000539843 CYP7A1P22680 504 aa18.65■□□□□ 0.58
UBE3B-211ENST00000539843 MAP3K12Q12852 859 aa18.65■□□□□ 0.58
UBE3B-211ENST00000539843 FAM110CQ1W6H9 321 aa18.65■□□□□ 0.58
UBE3B-211ENST00000539843 CEP85Q6P2H3 762 aa18.65■□□□□ 0.58
UBE3B-211ENST00000539843 DBNLQ9UJU6 430 aaKnown RBP18.65■□□□□ 0.58
UBE3B-211ENST00000539843 SLURP2P0DP57 97 aa18.64■□□□□ 0.57
UBE3B-211ENST00000539843 RLBP1P12271 317 aa18.64■□□□□ 0.57
UBE3B-211ENST00000539843 CAPN2P17655 700 aa18.64■□□□□ 0.57
UBE3B-211ENST00000539843 CTGFP29279 349 aa18.64■□□□□ 0.57
UBE3B-211ENST00000539843 USP5P45974 858 aa18.64■□□□□ 0.57
UBE3B-211ENST00000539843 HMGCS2P54868 508 aa18.64■□□□□ 0.57
UBE3B-211ENST00000539843 IRX3P78415 501 aaPredicted RBP18.64■□□□□ 0.57
UBE3B-211ENST00000539843 CCDC84Q86UT8 332 aaPredicted RBP18.64■□□□□ 0.57
UBE3B-211ENST00000539843 AACSQ86V21 672 aa18.64■□□□□ 0.57
UBE3B-211ENST00000539843 ANKRD13CQ8N6S4 541 aa18.64■□□□□ 0.57
UBE3B-211ENST00000539843 RNF208Q9H0X6 261 aa18.64■□□□□ 0.57
UBE3B-211ENST00000539843 TAOK2Q9UL54 1235 aa18.64■□□□□ 0.57
UBE3B-211ENST00000539843 TNRC18O15417 2968 aaPredicted RBP18.64■□□□□ 0.57
UBE3B-211ENST00000539843 ADCY3O60266 1144 aa18.63■□□□□ 0.57
UBE3B-211ENST00000539843 GJB1P08034 283 aa18.63■□□□□ 0.57
UBE3B-211ENST00000539843 CCL5P13501 91 aa18.63■□□□□ 0.57
UBE3B-211ENST00000539843 FLT3LGP49771 235 aa18.63■□□□□ 0.57
UBE3B-211ENST00000539843 TTF1Q15361 905 aaPredicted RBP18.63■□□□□ 0.57
UBE3B-211ENST00000539843 TREML2Q5T2D2 321 aa18.63■□□□□ 0.57
UBE3B-211ENST00000539843 PXYLP1Q8TE99 480 aa18.63■□□□□ 0.57
UBE3B-211ENST00000539843 EAF2Q96CJ1 260 aaPredicted RBP18.63■□□□□ 0.57
UBE3B-211ENST00000539843 PCDH10Q9P2E7 1040 aa18.63■□□□□ 0.57
UBE3B-211ENST00000539843 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.63■□□□□ 0.57
UBE3B-211ENST00000539843 C19orf81C9J6K1 198 aa18.62■□□□□ 0.57
UBE3B-211ENST00000539843 MTFR1Q15390 333 aa18.62■□□□□ 0.57
UBE3B-211ENST00000539843 CLASRPQ8N2M8 674 aaKnown RBP18.62■□□□□ 0.57
UBE3B-211ENST00000539843 HTATIP2Q9BUP3 242 aa18.62■□□□□ 0.57
UBE3B-211ENST00000539843 WDR18Q9BV38 432 aa18.62■□□□□ 0.57
UBE3B-211ENST00000539843 PIH1D3Q9NQM4 214 aaKnown RBP18.62■□□□□ 0.57
UBE3B-211ENST00000539843 DDX19BQ9UMR2 479 aa18.62■□□□□ 0.57
UBE3B-211ENST00000539843 EXOC6BQ9Y2D4 811 aa18.62■□□□□ 0.57
UBE3B-211ENST00000539843 ZSWIM8A7E2V4 1837 aa18.61■□□□□ 0.57
UBE3B-211ENST00000539843 GJA8P48165 433 aa18.61■□□□□ 0.57
UBE3B-211ENST00000539843 BACE1P56817 501 aa18.61■□□□□ 0.57
UBE3B-211ENST00000539843 IRF5Q13568 498 aa18.61■□□□□ 0.57
UBE3B-211ENST00000539843 MTMR2Q13614 643 aa18.61■□□□□ 0.57
UBE3B-211ENST00000539843 SH3D19Q5HYK7 790 aa18.61■□□□□ 0.57
UBE3B-211ENST00000539843 MAGEB6Q8N7X4 407 aa18.61■□□□□ 0.57
UBE3B-211ENST00000539843 PANK1Q8TE04 598 aa18.61■□□□□ 0.57
UBE3B-211ENST00000539843 TLR7Q9NYK1 1049 aaKnown RBP18.61■□□□□ 0.57
UBE3B-211ENST00000539843 PALD1Q9ULE6 856 aa18.61■□□□□ 0.57
UBE3B-211ENST00000539843 USP17L10C9JJH3 530 aa18.6■□□□□ 0.57
UBE3B-211ENST00000539843 ADGRA1Q86SQ6 560 aa18.6■□□□□ 0.57
UBE3B-211ENST00000539843 TTC6Q86TZ1 520 aa18.6■□□□□ 0.57
UBE3B-211ENST00000539843 CCAR1Q8IX12 1150 aaKnown RBP18.6■□□□□ 0.57
UBE3B-211ENST00000539843 RPAP2Q8IXW5 612 aaPredicted RBP18.6■□□□□ 0.57
UBE3B-211ENST00000539843 GTF3C2Q8WUA4 911 aaPredicted RBP18.6■□□□□ 0.57
UBE3B-211ENST00000539843 SAP30BPQ9UHR5 308 aaKnown RBP18.6■□□□□ 0.57
UBE3B-211ENST00000539843 GABRQQ9UN88 632 aa18.6■□□□□ 0.57
UBE3B-211ENST00000539843 IFIT2P09913 472 aaKnown RBP18.59■□□□□ 0.57
UBE3B-211ENST00000539843 MIGA1Q8NAN2 632 aa18.59■□□□□ 0.57
UBE3B-211ENST00000539843 DPF3Q92784 378 aa18.59■□□□□ 0.57
UBE3B-211ENST00000539843 KIF1BPQ96EK5 621 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms