RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 YTHDC1Q96MU7 727 aaKnown RBP18.47■□□□□ 0.55
USB1-203ENST00000539737 PAK6Q9NQU5 681 aaPredicted RBP18.47■□□□□ 0.55
USB1-203ENST00000539737 AGTPBP1Q9UPW5 1226 aa18.47■□□□□ 0.55
USB1-203ENST00000539737 TNNQ9UQP3 1299 aa18.47■□□□□ 0.55
USB1-203ENST00000539737 NR2E3Q9Y5X4 410 aa18.47■□□□□ 0.55
USB1-203ENST00000539737 MROH7-TTC4A0A0A0MT08 1334 aa18.47■□□□□ 0.55
USB1-203ENST00000539737 PLXNB2O15031 1838 aa18.46■□□□□ 0.55
USB1-203ENST00000539737 LOC285556D6RIA3 1793 aa18.46■□□□□ 0.55
USB1-203ENST00000539737 HMGCS2P54868 508 aa18.46■□□□□ 0.55
USB1-203ENST00000539737 JAG1P78504 1218 aa18.46■□□□□ 0.55
USB1-203ENST00000539737 XAGE2Q96GT9 111 aa18.46■□□□□ 0.55
USB1-203ENST00000539737 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.46■□□□□ 0.55
USB1-203ENST00000539737 SIPA1L1O43166 1804 aa18.46■□□□□ 0.55
USB1-203ENST00000539737 CUL9Q8IWT3 2517 aa18.45■□□□□ 0.54
USB1-203ENST00000539737 A0A1B0GUL7 405 aa18.45■□□□□ 0.54
USB1-203ENST00000539737 IL15P40933 162 aaPredicted RBP18.45■□□□□ 0.54
USB1-203ENST00000539737 MAP3K10Q02779 954 aa18.45■□□□□ 0.54
USB1-203ENST00000539737 Q7L0L9 218 aa18.45■□□□□ 0.54
USB1-203ENST00000539737 SLC17A8Q8NDX2 589 aa18.45■□□□□ 0.54
USB1-203ENST00000539737 DDX60LQ5H9U9 1706 aaKnown RBP18.44■□□□□ 0.54
USB1-203ENST00000539737 DLL1O00548 723 aa18.44■□□□□ 0.54
USB1-203ENST00000539737 CTNND1O60716 968 aaKnown RBP18.44■□□□□ 0.54
USB1-203ENST00000539737 MNX1P50219 401 aaPredicted RBP18.44■□□□□ 0.54
USB1-203ENST00000539737 IRF5Q13568 498 aa18.44■□□□□ 0.54
USB1-203ENST00000539737 CRISPLD2Q9H0B8 497 aa18.44■□□□□ 0.54
USB1-203ENST00000539737 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.44■□□□□ 0.54
USB1-203ENST00000539737 HMG20BQ9P0W2 317 aa18.44■□□□□ 0.54
USB1-203ENST00000539737 SEMA3EO15041 775 aa18.43■□□□□ 0.54
USB1-203ENST00000539737 FTSJ3Q8IY81 847 aaKnown RBP18.43■□□□□ 0.54
USB1-203ENST00000539737 COPRSQ9NQ92 184 aa18.43■□□□□ 0.54
USB1-203ENST00000539737 RCAN3Q9UKA8 241 aa18.43■□□□□ 0.54
USB1-203ENST00000539737 GPR75-ASB3A0A0A6YYF3 556 aa18.42■□□□□ 0.54
USB1-203ENST00000539737 ERICH6Q7L0X2 663 aa18.42■□□□□ 0.54
USB1-203ENST00000539737 PXYLP1Q8TE99 480 aa18.42■□□□□ 0.54
USB1-203ENST00000539737 TRIB2Q92519 343 aa18.42■□□□□ 0.54
USB1-203ENST00000539737 COA7Q96BR5 231 aa18.42■□□□□ 0.54
USB1-203ENST00000539737 NEUROD6Q96NK8 337 aa18.42■□□□□ 0.54
USB1-203ENST00000539737 ASCC2Q9H1I8 757 aaPredicted RBP18.42■□□□□ 0.54
USB1-203ENST00000539737 SLC45A1Q9Y2W3 748 aa18.42■□□□□ 0.54
USB1-203ENST00000539737 CYP2B6P20813 491 aa18.41■□□□□ 0.54
USB1-203ENST00000539737 FAM110CQ1W6H9 321 aa18.41■□□□□ 0.54
USB1-203ENST00000539737 SH3RF3Q8TEJ3 882 aaPredicted RBP18.41■□□□□ 0.54
USB1-203ENST00000539737 CLUAP1Q96AJ1 413 aa18.41■□□□□ 0.54
USB1-203ENST00000539737 SNRKQ9NRH2 765 aa18.41■□□□□ 0.54
USB1-203ENST00000539737 GJD2Q9UKL4 321 aa18.41■□□□□ 0.54
USB1-203ENST00000539737 ZGPATQ8N5A5 531 aaKnown RBP18.4■□□□□ 0.54
USB1-203ENST00000539737 ZNF280CQ8ND82 737 aa18.4■□□□□ 0.54
USB1-203ENST00000539737 NSUN4Q96CB9 384 aaKnown RBP18.4■□□□□ 0.54
USB1-203ENST00000539737 FAM163AQ96GL9 167 aaPredicted RBP18.4■□□□□ 0.54
USB1-203ENST00000539737 OSBPL5Q9H0X9 879 aaPredicted RBP18.4■□□□□ 0.54
USB1-203ENST00000539737 TXNRD2Q9NNW7 524 aa18.4■□□□□ 0.54
USB1-203ENST00000539737 RAI14Q9P0K7 980 aa18.4■□□□□ 0.54
USB1-203ENST00000539737 MYO5AQ9Y4I1 1855 aaKnown RBP18.39■□□□□ 0.54
USB1-203ENST00000539737 SRGAP3O43295 1099 aa18.39■□□□□ 0.53
USB1-203ENST00000539737 GNAI3P08754 354 aa18.39■□□□□ 0.53
USB1-203ENST00000539737 MS4A1P11836 297 aa18.39■□□□□ 0.53
USB1-203ENST00000539737 MTMR2Q13614 643 aa18.39■□□□□ 0.53
USB1-203ENST00000539737 NECAB2Q7Z6G3 386 aa18.39■□□□□ 0.53
USB1-203ENST00000539737 GDF15Q99988 308 aa18.39■□□□□ 0.53
USB1-203ENST00000539737 DNAJC18Q9H819 358 aa18.39■□□□□ 0.53
USB1-203ENST00000539737 FBXO3Q9UK99 471 aa18.39■□□□□ 0.53
USB1-203ENST00000539737 GDF11O95390 407 aa18.38■□□□□ 0.53
USB1-203ENST00000539737 HMGCRP04035 888 aa18.38■□□□□ 0.53
USB1-203ENST00000539737 CAP2P40123 477 aa18.38■□□□□ 0.53
USB1-203ENST00000539737 MCAMP43121 646 aa18.38■□□□□ 0.53
USB1-203ENST00000539737 POTEEQ6S8J3 1075 aa18.38■□□□□ 0.53
USB1-203ENST00000539737 ADGRA1Q86SQ6 560 aa18.38■□□□□ 0.53
USB1-203ENST00000539737 TEX11Q8IYF3 940 aa18.38■□□□□ 0.53
USB1-203ENST00000539737 SPATA5Q8NB90 893 aa18.38■□□□□ 0.53
USB1-203ENST00000539737 CDK5RAP2Q96SN8 1893 aa18.37■□□□□ 0.53
USB1-203ENST00000539737 UNC80Q8N2C7 3258 aa18.37■□□□□ 0.53
USB1-203ENST00000539737 MAGEA10P43363 369 aaPredicted RBP18.37■□□□□ 0.53
USB1-203ENST00000539737 CCL14Q16627 93 aa18.37■□□□□ 0.53
USB1-203ENST00000539737 SPTY2D1Q68D10 685 aaPredicted RBP18.37■□□□□ 0.53
USB1-203ENST00000539737 MAPKAPK5Q8IW41 473 aa18.37■□□□□ 0.53
USB1-203ENST00000539737 TMEM57Q8N5G2 664 aa18.37■□□□□ 0.53
USB1-203ENST00000539737 P2RX7Q99572 595 aaKnown RBP18.37■□□□□ 0.53
USB1-203ENST00000539737 AATFQ9NY61 560 aaKnown RBP eCLIP18.37■□□□□ 0.53
USB1-203ENST00000539737 PNMA3Q9UL41 463 aa18.37■□□□□ 0.53
USB1-203ENST00000539737 NDUFB9Q9Y6M9 179 aa18.37■□□□□ 0.53
USB1-203ENST00000539737 PFASO15067 1338 aa18.37■□□□□ 0.53
USB1-203ENST00000539737 TBC1D12O60347 775 aa18.36■□□□□ 0.53
USB1-203ENST00000539737 PRKAR2AP13861 404 aaKnown RBP18.36■□□□□ 0.53
USB1-203ENST00000539737 MVPQ14764 893 aaKnown RBP18.36■□□□□ 0.53
USB1-203ENST00000539737 PDS5AQ29RF7 1337 aaKnown RBP18.36■□□□□ 0.53
USB1-203ENST00000539737 PROCA1Q8NCQ7 364 aaPredicted RBP18.36■□□□□ 0.53
USB1-203ENST00000539737 SAP30BPQ9UHR5 308 aaKnown RBP18.36■□□□□ 0.53
USB1-203ENST00000539737 PNMA6EA0A0J9YXQ4 647 aa18.35■□□□□ 0.53
USB1-203ENST00000539737 USP17L5A8MUK1 530 aa18.35■□□□□ 0.53
USB1-203ENST00000539737 CCND3P30281 292 aaPredicted RBP18.35■□□□□ 0.53
USB1-203ENST00000539737 Q3C1V9 767 aa18.35■□□□□ 0.53
USB1-203ENST00000539737 ITPRIPQ8IWB1 547 aa18.35■□□□□ 0.53
USB1-203ENST00000539737 SLF2Q8IX21 1173 aa18.35■□□□□ 0.53
USB1-203ENST00000539737 PORCNQ9H237 461 aa18.35■□□□□ 0.53
USB1-203ENST00000539737 C11orf49Q9H6J7 331 aa18.35■□□□□ 0.53
USB1-203ENST00000539737 HMX1Q9NP08 348 aaPredicted RBP18.35■□□□□ 0.53
USB1-203ENST00000539737 LAMA2P24043 3122 aaKnown RBP18.35■□□□□ 0.53
USB1-203ENST00000539737 RPTORQ8N122 1335 aa18.34■□□□□ 0.53
USB1-203ENST00000539737 GORABQ5T7V8 394 aa18.34■□□□□ 0.53
USB1-203ENST00000539737 DEFB123Q8N688 67 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 199.2 ms